Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25n23
         (161 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022179-1|AAY51573.1|  360|Drosophila melanogaster IP01239p pro...    29   1.2  
AE013599-2438|AAF57887.1|  338|Drosophila melanogaster CG17287-P...    29   1.2  
BT001712-1|AAN71467.1|  151|Drosophila melanogaster RE67710p pro...    28   2.0  
AE014297-766|AAN13389.1|  141|Drosophila melanogaster CG31460-PA...    28   2.0  

>BT022179-1|AAY51573.1|  360|Drosophila melanogaster IP01239p
           protein.
          Length = 360

 Score = 28.7 bits (61), Expect = 1.2
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = -1

Query: 161 FFFYKNIYCFVRCNVM*YYFICVDGFSLLLVEGQLPHTFFAITY 30
           F FY  +YCF    VM Y    + GF +  ++ Q  H++  + Y
Sbjct: 195 FLFYAEVYCFYLFCVMVYDLYLICGFEVTALKNQ--HSWNILQY 236


>AE013599-2438|AAF57887.1|  338|Drosophila melanogaster CG17287-PA
           protein.
          Length = 338

 Score = 28.7 bits (61), Expect = 1.2
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = -1

Query: 161 FFFYKNIYCFVRCNVM*YYFICVDGFSLLLVEGQLPHTFFAITY 30
           F FY  +YCF    VM Y    + GF +  ++ Q  H++  + Y
Sbjct: 173 FLFYAEVYCFYLFCVMVYDLYLICGFEVTALKNQ--HSWNILQY 214


>BT001712-1|AAN71467.1|  151|Drosophila melanogaster RE67710p
           protein.
          Length = 151

 Score = 27.9 bits (59), Expect = 2.0
 Identities = 10/31 (32%), Positives = 20/31 (64%)
 Frame = +2

Query: 2   FCVITIYYMNKLSQKKYAVVAPQPAAVKSRR 94
           F ++ +Y++N++S K Y+V  P   A  +R+
Sbjct: 115 FSLVGLYFLNRISTKYYSVQVPSVDAPTTRK 145


>AE014297-766|AAN13389.1|  141|Drosophila melanogaster CG31460-PA
           protein.
          Length = 141

 Score = 27.9 bits (59), Expect = 2.0
 Identities = 10/31 (32%), Positives = 20/31 (64%)
 Frame = +2

Query: 2   FCVITIYYMNKLSQKKYAVVAPQPAAVKSRR 94
           F ++ +Y++N++S K Y+V  P   A  +R+
Sbjct: 105 FSLVGLYFLNRISTKYYSVQVPSVDAPTTRK 135


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,213,218
Number of Sequences: 53049
Number of extensions: 82851
Number of successful extensions: 139
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 139
length of database: 24,988,368
effective HSP length: 34
effective length of database: 23,184,702
effective search space used: 440509338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)