Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25n15
         (267 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    27   0.030
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    22   1.5  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   2.6  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   3.5  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          20   4.6  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    20   6.1  

>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 27.5 bits (58), Expect = 0.030
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +2

Query: 77  MQLELKCCGVNSNLDWYKHRSSYPPACCGRASN 175
           +Q  L+CCGV+S  D+  +    P +CC    N
Sbjct: 139 IQKNLQCCGVHSLSDY--NDKPIPASCCNSPEN 169


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 1.5
 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = +3

Query: 33  CWMPSILRSEALSLPCNSS*SA-AE*ILTWIGISTEA 140
           CW+P    +   S  C +  S  A  +LTW+G S  A
Sbjct: 284 CWVPFFCVNIVTSY-CKTCISGRAFQVLTWLGYSNSA 319


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.0 bits (42), Expect = 2.6
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -3

Query: 34  HHRLRHARXQS 2
           HH +RH R QS
Sbjct: 81  HHPIRHGRRQS 91


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 20.6 bits (41), Expect = 3.5
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 149 PACCGRASNEKRGER 193
           P CCG+ S++K   R
Sbjct: 364 PNCCGKWSSQKSEPR 378


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 20.2 bits (40), Expect = 4.6
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -2

Query: 170 KHVRSTPEDTSFGAYTN 120
           +H+  TP++TS   YT+
Sbjct: 156 RHLAETPKNTSAVRYTH 172


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 19.8 bits (39), Expect = 6.1
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = +2

Query: 164 RASNEKRGERCDFPLYPTGCLRPALIQLR 250
           R S+    E   F + P G  RPA   LR
Sbjct: 308 RPSDGATSEPFPFLMLPLGAGRPAFWSLR 336


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,567
Number of Sequences: 438
Number of extensions: 1471
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  5012760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)