Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte25n08
(728 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 25 0.97
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 25 0.97
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 25 0.97
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 25 0.97
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 25 0.97
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 25 0.97
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 25 0.97
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 25 0.97
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 23 3.9
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 23 3.9
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 22 6.8
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 22 6.8
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 21 9.0
AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phospha... 21 9.0
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 0.97
Identities = 11/28 (39%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +2
Query: 71 EYSSYTVYSNKYQSHVKQ-DHWNPIIIE 151
+YS+Y Y+N Y ++ K+ ++N I IE
Sbjct: 90 KYSNYNNYNNNYNTNYKKLQYYNIINIE 117
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 0.97
Identities = 11/28 (39%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +2
Query: 71 EYSSYTVYSNKYQSHVKQ-DHWNPIIIE 151
+YS+Y Y+N Y ++ K+ ++N I IE
Sbjct: 90 KYSNYNNYNNNYNTNYKKLQYYNIINIE 117
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 0.97
Identities = 11/28 (39%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +2
Query: 71 EYSSYTVYSNKYQSHVKQ-DHWNPIIIE 151
+YS+Y Y+N Y ++ K+ ++N I IE
Sbjct: 90 KYSNYNNYNNNYNTNYKKLQYYNIINIE 117
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 0.97
Identities = 11/28 (39%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +2
Query: 71 EYSSYTVYSNKYQSHVKQ-DHWNPIIIE 151
+YS+Y Y+N Y ++ K+ ++N I IE
Sbjct: 90 KYSNYNNYNNNYNTNYKKLQYYNIINIE 117
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 0.97
Identities = 11/28 (39%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +2
Query: 71 EYSSYTVYSNKYQSHVKQ-DHWNPIIIE 151
+YS+Y Y+N Y ++ K+ ++N I IE
Sbjct: 90 KYSNYNNYNNNYNTNYKKLQYYNIINIE 117
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 0.97
Identities = 11/28 (39%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +2
Query: 71 EYSSYTVYSNKYQSHVKQ-DHWNPIIIE 151
+YS+Y Y+N Y ++ K+ ++N I IE
Sbjct: 90 KYSNYNNYNNNYNTNYKKLQYYNIINIE 117
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 0.97
Identities = 11/28 (39%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +2
Query: 71 EYSSYTVYSNKYQSHVKQ-DHWNPIIIE 151
+YS+Y Y+N Y ++ K+ ++N I IE
Sbjct: 90 KYSNYNNYNNNYNTNYKKLQYYNIINIE 117
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 24.6 bits (51), Expect = 0.97
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +2
Query: 74 YSSYTVYSNKYQSHVKQDHWNPIIIE 151
YS+Y Y+N Y ++ K+ ++N IE
Sbjct: 91 YSNYNNYNNNYNNYNKKLYYNINYIE 116
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 22.6 bits (46), Expect = 3.9
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -1
Query: 608 NRSSVRKMTTIQGISPNLLKPS 543
NR + ++ + ISPN LKP+
Sbjct: 462 NRKQISELESNMQISPNELKPN 483
Score = 22.6 bits (46), Expect = 3.9
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -2
Query: 505 GSASRSPALEALVAATNKCYRCIE 434
G +SP L+ LV AT+ C+E
Sbjct: 1289 GKLRQSPRLKELVGATSIIKDCVE 1312
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 22.6 bits (46), Expect = 3.9
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +3
Query: 525 DSVPKRGRLQQVR*NTLDGCHFAN*APIP*RPRKSEVVRIHR 650
+S K G L V LD H+ + PR+ E + +HR
Sbjct: 694 ESDDKEGYLHSVVSGALDRLHYETDPCVRYYPRRKEWLYLHR 735
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.8 bits (44), Expect = 6.8
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = +2
Query: 71 EYSSYTVYSNKYQSHVKQDHWN 136
+YS+Y Y+N Y ++ ++ N
Sbjct: 90 KYSNYNNYNNNYNNNYNNNYNN 111
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.8 bits (44), Expect = 6.8
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = +2
Query: 71 EYSSYTVYSNKYQSHVKQDHWN 136
+YS+Y Y+N Y ++ ++ N
Sbjct: 90 KYSNYNNYNNNYNNNYNNNYNN 111
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 21.4 bits (43), Expect = 9.0
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +1
Query: 490 CGWRNPDGI 516
CGW+NP I
Sbjct: 153 CGWKNPSRI 161
>AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phosphate
dehydrogenase protein.
Length = 363
Score = 21.4 bits (43), Expect = 9.0
Identities = 11/37 (29%), Positives = 14/37 (37%)
Frame = -3
Query: 669 VDERSPADVYVQLLTFGVVRESELSSQNDNHPGYFTE 559
++ R P V + G EL NHP Y E
Sbjct: 316 MENRFPLFTTVHRICIGETMPMELIENLRNHPEYIDE 352
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,415
Number of Sequences: 438
Number of extensions: 4549
Number of successful extensions: 18
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -