Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25n04
         (696 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U61954-12|AAK29807.1|  274|Caenorhabditis elegans Fatty acid elo...    32   0.34 
U28740-4|AAA68319.2|  276|Caenorhabditis elegans Temporarily ass...    32   0.34 
AF067607-3|AAF98607.1|  590|Caenorhabditis elegans Hypothetical ...    31   0.60 
Z83103-9|CAI79157.1|  376|Caenorhabditis elegans Hypothetical pr...    31   1.0  
U41532-7|ABD63237.1|  769|Caenorhabditis elegans Hypothetical pr...    29   4.2  
U41532-6|AAF99908.2|  812|Caenorhabditis elegans Hypothetical pr...    29   4.2  
AL031621-2|CAA20934.2| 1000|Caenorhabditis elegans Hypothetical ...    28   5.5  
AC084158-9|AAK68559.2|  465|Caenorhabditis elegans Hypothetical ...    28   5.5  
AC024835-2|AAK68537.1|  684|Caenorhabditis elegans Hypothetical ...    28   5.5  
Z81044-6|CAB02806.1|  360|Caenorhabditis elegans Hypothetical pr...    28   7.3  
Z68299-7|CAJ90495.1|  269|Caenorhabditis elegans Hypothetical pr...    28   7.3  
Z68299-6|CAA92610.2|  412|Caenorhabditis elegans Hypothetical pr...    28   7.3  
Z83110-6|CAB05528.3|  545|Caenorhabditis elegans Hypothetical pr...    27   9.7  
Z81462-8|CAB03846.3|  545|Caenorhabditis elegans Hypothetical pr...    27   9.7  
AF003137-3|AAB93640.1|  625|Caenorhabditis elegans Hypothetical ...    27   9.7  

>U61954-12|AAK29807.1|  274|Caenorhabditis elegans Fatty acid
           elongation protein 6 protein.
          Length = 274

 Score = 32.3 bits (70), Expect = 0.34
 Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
 Frame = +3

Query: 390 FGYRCFKASM-FLTGFTFGSAVVYLICLQEYLMPPYGNVGVALCAGLLFGLITM-LIQYV 563
           + +  F+A++ F T  T+ +  V+ I    Y++  +G   V + A +   + TM ++Q+V
Sbjct: 151 YAFMSFEANLGFNTWITWMNFSVHSIMYGYYMLRSFG---VKVPAWIAKNITTMQILQFV 207

Query: 564 GLFMTGFHTGLLLAIAGLAVYDHFLDKRPTAYWMCVVV 677
                 FH G L A+ G +V     D  P  YW C+++
Sbjct: 208 ITHFILFHVGYL-AVTGQSV-----DSTPGYYWFCLLM 239


>U28740-4|AAA68319.2|  276|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 132 protein.
          Length = 276

 Score = 32.3 bits (70), Expect = 0.34
 Identities = 22/104 (21%), Positives = 37/104 (35%), Gaps = 2/104 (1%)
 Frame = +3

Query: 303 FCTSIDTNYDPIISIICAMYIAFGIVYTLFGYRCFKASMFLTGFTFGSAVVYLICLQEYL 482
           +   +  NY  + +      +  G V TLF  +    +  +TG    S   Y +  +   
Sbjct: 129 YAREVPLNYVLLAAFTAVQAVTMGCVVTLFEAKVVLEAAVITGLVVASLFAYTLQNKRDF 188

Query: 483 MPPYGNVGVALCAGLLFGLITMLIQ--YVGLFMTGFHTGLLLAI 608
              Y ++G  LC  L  G+  M      V   +  F  GL   +
Sbjct: 189 SVGYASMGSLLCVLLWAGIFQMFFMSPAVNFVINVFGAGLFCVL 232


>AF067607-3|AAF98607.1|  590|Caenorhabditis elegans Hypothetical
           protein C18H7.6 protein.
          Length = 590

 Score = 31.5 bits (68), Expect = 0.60
 Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
 Frame = +3

Query: 285 PHIEDSFCTSIDTNYDPIISIICAMYIA-----FGIVYTLFGYRCFKASMFLTGFTFG 443
           P +  +FC S++    PII+++C   +      F +   +F ++ F  ++ +TG TFG
Sbjct: 342 PFVLKAFCASVNRIIGPIIALVCLQQVGLCNPNFNVFQNIF-FQLFYCAL-MTGLTFG 397


>Z83103-9|CAI79157.1|  376|Caenorhabditis elegans Hypothetical
           protein D1025.10 protein.
          Length = 376

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 17/55 (30%), Positives = 25/55 (45%)
 Frame = +3

Query: 519 AGLLFGLITMLIQYVGLFMTGFHTGLLLAIAGLAVYDHFLDKRPTAYWMCVVVLL 683
           A +L  +I     +V LFM G  T   L       YDH  +  PT +  C++ L+
Sbjct: 306 ANVLLDIIKDYFSHVDLFMQGKKTKEPLWDLSEEFYDHMFESNPTLHTDCLLFLI 360


>U41532-7|ABD63237.1|  769|Caenorhabditis elegans Hypothetical
           protein F11D5.1c protein.
          Length = 769

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
 Frame = -3

Query: 616 SPAIAS--KSPVWKPVMNSPTYCI--SMVMRPKSNPAQSATP 503
           SPA+ S   S +WKP +NSPT     S +    S+P  S  P
Sbjct: 391 SPAVKSPISSNLWKPTINSPTMSTTESTISPVASSPTASKLP 432


>U41532-6|AAF99908.2|  812|Caenorhabditis elegans Hypothetical
           protein F11D5.1a protein.
          Length = 812

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
 Frame = -3

Query: 616 SPAIAS--KSPVWKPVMNSPTYCI--SMVMRPKSNPAQSATP 503
           SPA+ S   S +WKP +NSPT     S +    S+P  S  P
Sbjct: 434 SPAVKSPISSNLWKPTINSPTMSTTESTISPVASSPTASKLP 475


>AL031621-2|CAA20934.2| 1000|Caenorhabditis elegans Hypothetical
           protein F28H6.4 protein.
          Length = 1000

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 19/77 (24%), Positives = 28/77 (36%)
 Frame = -3

Query: 592 PVWKPVMNSPTYCISMVMRPKSNPAQSATPTLP*GGIRYSCRHMRYTTAEPKVKPVKNIL 413
           P   P    P   +  V RP  NP  SA         +   R+M+    +P+  P    +
Sbjct: 600 PTPNPTSTKPAQILGAVARPSENPGTSAQSPQSVNVAKVQSRNMK----KPQSVPTATDI 655

Query: 412 ALKQR*PNSVYTIPNAI 362
            LK+  P    T+   I
Sbjct: 656 GLKEPKPEPAETLEKEI 672


>AC084158-9|AAK68559.2|  465|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.15 protein.
          Length = 465

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 4/98 (4%)
 Frame = +3

Query: 384 TLFGYRCFKASMFLTGFTFGSAVVY---LICLQEYLMPPYGNVGVALCAGLLFGLITMLI 554
           TLF     K  M +  F F + V+    L+ +Q +++  Y    +  C   +    + LI
Sbjct: 122 TLFLCYLQKVCMEIMPFFFNNLVLLFTILLGVQRFIVVQYPLQSIRWCTPKMVRRYSKLI 181

Query: 555 QYVGLFMTGFHTGLLLAIAGLAVYDHFLDK-RPTAYWM 665
             +  F+TGFH     ++  + +  HF  K R  ++W+
Sbjct: 182 LILATFLTGFH-----SLYDIRLLYHFCIKYRDESFWV 214


>AC024835-2|AAK68537.1|  684|Caenorhabditis elegans Hypothetical
           protein Y57E12B.3 protein.
          Length = 684

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = -3

Query: 607 IASKSPVWKPVMNSPTYCISMVMRPKSNPAQSATPTLP 494
           + ++ P W P+++SP   I   M P + P     PTLP
Sbjct: 210 LPTQPPAWSPMLDSPIKPIQNSMFP-TFPTMPTLPTLP 246


>Z81044-6|CAB02806.1|  360|Caenorhabditis elegans Hypothetical
           protein C30H6.2 protein.
          Length = 360

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 7/53 (13%)
 Frame = +3

Query: 504 GVALCAGLLFGLITMLIQYVGLFMT-------GFHTGLLLAIAGLAVYDHFLD 641
           G+++C  L+  L++ L  Y GLF+           T LL   AG+ +Y  ++D
Sbjct: 289 GLSMCTALILNLLSALTAYAGLFIAIVLGRDEEIETILLAITAGMFLYVAWVD 341


>Z68299-7|CAJ90495.1|  269|Caenorhabditis elegans Hypothetical
           protein T04B2.3b protein.
          Length = 269

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = -2

Query: 209 SSSPNDVISDYSNYSAFQRHVSISHCKLK-ST*SLSQKPYEKIKSLLHDT 63
           SS P+D   D S+   FQ+H  + H  L  S   L+ +  +K    L++T
Sbjct: 11  SSHPSDPNGDISSCDEFQKHSDVEHNDLSGSCPDLTAQQIQKWDDYLYET 60


>Z68299-6|CAA92610.2|  412|Caenorhabditis elegans Hypothetical
           protein T04B2.3a protein.
          Length = 412

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = -2

Query: 209 SSSPNDVISDYSNYSAFQRHVSISHCKLK-ST*SLSQKPYEKIKSLLHDT 63
           SS P+D   D S+   FQ+H  + H  L  S   L+ +  +K    L++T
Sbjct: 154 SSHPSDPNGDISSCDEFQKHSDVEHNDLSGSCPDLTAQQIQKWDDYLYET 203


>Z83110-6|CAB05528.3|  545|Caenorhabditis elegans Hypothetical
           protein F57C2.6 protein.
          Length = 545

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -3

Query: 457 YTTAEPKVKPVKNILALKQR*PNSVYTIP 371
           Y T+ PK +P KNI  ++ R   +  TIP
Sbjct: 247 YATSSPKQRPRKNIRQVRNRPAQTELTIP 275


>Z81462-8|CAB03846.3|  545|Caenorhabditis elegans Hypothetical
           protein F57C2.6 protein.
          Length = 545

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -3

Query: 457 YTTAEPKVKPVKNILALKQR*PNSVYTIP 371
           Y T+ PK +P KNI  ++ R   +  TIP
Sbjct: 247 YATSSPKQRPRKNIRQVRNRPAQTELTIP 275


>AF003137-3|AAB93640.1|  625|Caenorhabditis elegans Hypothetical
           protein C27A12.2 protein.
          Length = 625

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 21/67 (31%), Positives = 29/67 (43%)
 Frame = -2

Query: 611 SYSQQKSGVETSHEQPNVLYQHGDETEE*SRAKRNSDITIRRHQVLL*AYEIYNSRAKSE 432
           +Y Q    VE    +P  LY+  D T    R K+     I  H V    +  Y S+  +E
Sbjct: 31  TYEQFNESVEILPSRPECLYRRNDPTNRSYRMKKRPPAQI-YHCVQCNKHIKYPSKI-TE 88

Query: 431 TSQKHTG 411
             +KHTG
Sbjct: 89  HIRKHTG 95


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,207,692
Number of Sequences: 27780
Number of extensions: 386465
Number of successful extensions: 1084
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1031
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1084
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)