Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte25n03
(728 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC085605-1|AAH85605.1| 297|Homo sapiens transmembrane protein 1... 157 5e-38
AL360224-2|CAI40820.1| 297|Homo sapiens transmembrane protein 1... 157 5e-38
AL359079-2|CAI41538.1| 297|Homo sapiens transmembrane protein 1... 157 5e-38
AL360224-1|CAI40819.1| 258|Homo sapiens transmembrane protein 1... 73 8e-13
AL359079-1|CAI41537.1| 258|Homo sapiens transmembrane protein 1... 73 8e-13
AK026332-1|BAB15450.1| 258|Homo sapiens protein ( Homo sapiens ... 73 8e-13
BC120952-1|AAI20953.1| 305|Homo sapiens G protein-coupled recep... 30 9.8
BC120951-1|AAI20952.1| 305|Homo sapiens G protein-coupled recep... 30 9.8
AY288420-1|AAP72129.1| 305|Homo sapiens G protein-coupled recep... 30 9.8
>BC085605-1|AAH85605.1| 297|Homo sapiens transmembrane protein 164
protein.
Length = 297
Score = 157 bits (380), Expect = 5e-38
Identities = 80/219 (36%), Positives = 126/219 (57%), Gaps = 16/219 (7%)
Frame = +3
Query: 120 MFEWAYSGANKAVPRNVGPECAFFLTPQRKIIETIIVFLICVY-LLVKTYPILKIPIDT- 293
+ +W Y G + + N GP+CA FL+ Q++++E+++V + + +LV IL+ +
Sbjct: 9 LLDWLYGGVDPSFAGNGGPDCAAFLSWQQRLLESVVVLTLALLEILVALRHILRQTKEDG 68
Query: 294 ---------DYTKSDRGGKRXXXXXXXXX-----WGMEIGFKFASHTVIYLLNPCHVTTL 431
T+ GK +G+E+GFKFA+ TVIYLLNPCH+ T+
Sbjct: 69 RGSPGSQPEQVTQRPEEGKESLSKNLLLVALCLTFGVEVGFKFATKTVIYLLNPCHLVTM 128
Query: 432 IQIYLLAAPPSKIVTALFRIHLYLLNGPLLAFLFPETASRKIFVEAALYWIQHGMMCIIP 611
+ I+LLA PP + +F++ +++LNG LLA LFP +R + E +Y+IQH M+ ++P
Sbjct: 129 MHIFLLACPPCRGAIVVFKLQMHMLNGALLALLFPVVNTRLLPFELEIYYIQHVMLYVVP 188
Query: 612 YYLLRLGGVYNIEPIRDFNWSVFSYCLNLLYHFXILQII 728
YLL GG Y EP+ F W++ S L YHF +LQI+
Sbjct: 189 IYLLWKGGAYTPEPLSSFRWALLSTGLMFFYHFSVLQIL 227
>AL360224-2|CAI40820.1| 297|Homo sapiens transmembrane protein 164
protein.
Length = 297
Score = 157 bits (380), Expect = 5e-38
Identities = 80/219 (36%), Positives = 126/219 (57%), Gaps = 16/219 (7%)
Frame = +3
Query: 120 MFEWAYSGANKAVPRNVGPECAFFLTPQRKIIETIIVFLICVY-LLVKTYPILKIPIDT- 293
+ +W Y G + + N GP+CA FL+ Q++++E+++V + + +LV IL+ +
Sbjct: 9 LLDWLYGGVDPSFAGNGGPDCAAFLSWQQRLLESVVVLTLALLEILVALRHILRQTKEDG 68
Query: 294 ---------DYTKSDRGGKRXXXXXXXXX-----WGMEIGFKFASHTVIYLLNPCHVTTL 431
T+ GK +G+E+GFKFA+ TVIYLLNPCH+ T+
Sbjct: 69 RGSPGSQPEQVTQRPEEGKESLSKNLLLVALCLTFGVEVGFKFATKTVIYLLNPCHLVTM 128
Query: 432 IQIYLLAAPPSKIVTALFRIHLYLLNGPLLAFLFPETASRKIFVEAALYWIQHGMMCIIP 611
+ I+LLA PP + +F++ +++LNG LLA LFP +R + E +Y+IQH M+ ++P
Sbjct: 129 MHIFLLACPPCRGAIVVFKLQMHMLNGALLALLFPVVNTRLLPFELEIYYIQHVMLYVVP 188
Query: 612 YYLLRLGGVYNIEPIRDFNWSVFSYCLNLLYHFXILQII 728
YLL GG Y EP+ F W++ S L YHF +LQI+
Sbjct: 189 IYLLWKGGAYTPEPLSSFRWALLSTGLMFFYHFSVLQIL 227
>AL359079-2|CAI41538.1| 297|Homo sapiens transmembrane protein 164
protein.
Length = 297
Score = 157 bits (380), Expect = 5e-38
Identities = 80/219 (36%), Positives = 126/219 (57%), Gaps = 16/219 (7%)
Frame = +3
Query: 120 MFEWAYSGANKAVPRNVGPECAFFLTPQRKIIETIIVFLICVY-LLVKTYPILKIPIDT- 293
+ +W Y G + + N GP+CA FL+ Q++++E+++V + + +LV IL+ +
Sbjct: 9 LLDWLYGGVDPSFAGNGGPDCAAFLSWQQRLLESVVVLTLALLEILVALRHILRQTKEDG 68
Query: 294 ---------DYTKSDRGGKRXXXXXXXXX-----WGMEIGFKFASHTVIYLLNPCHVTTL 431
T+ GK +G+E+GFKFA+ TVIYLLNPCH+ T+
Sbjct: 69 RGSPGSQPEQVTQRPEEGKESLSKNLLLVALCLTFGVEVGFKFATKTVIYLLNPCHLVTM 128
Query: 432 IQIYLLAAPPSKIVTALFRIHLYLLNGPLLAFLFPETASRKIFVEAALYWIQHGMMCIIP 611
+ I+LLA PP + +F++ +++LNG LLA LFP +R + E +Y+IQH M+ ++P
Sbjct: 129 MHIFLLACPPCRGAIVVFKLQMHMLNGALLALLFPVVNTRLLPFELEIYYIQHVMLYVVP 188
Query: 612 YYLLRLGGVYNIEPIRDFNWSVFSYCLNLLYHFXILQII 728
YLL GG Y EP+ F W++ S L YHF +LQI+
Sbjct: 189 IYLLWKGGAYTPEPLSSFRWALLSTGLMFFYHFSVLQIL 227
>AL360224-1|CAI40819.1| 258|Homo sapiens transmembrane protein 164
protein.
Length = 258
Score = 73.3 bits (172), Expect = 8e-13
Identities = 60/204 (29%), Positives = 99/204 (48%), Gaps = 1/204 (0%)
Frame = +3
Query: 120 MFEWAYSGANKAVPRNVGPECAFFLTPQRKIIETIIVFLICVY-LLVKTYPILKIPIDTD 296
+ +W Y G + + N GP+CA FL+ Q++++E+++V + + +LV IL+
Sbjct: 9 LLDWLYGGVDPSFAGNGGPDCAAFLSWQQRLLESVVVLTLALLEILVALRHILR------ 62
Query: 297 YTKSDRGGKRXXXXXXXXXWGMEIGFKFASHTVIYLLNPCHVTTLIQIYLLAAPPSKIVT 476
TK D G E G + S ++ L+ C +T +++ A +K V
Sbjct: 63 QTKEDGRGSPGSQPEQVTQRPEE-GKESLSKNLL-LVALC-LTFGVEVGFKFA--TKTV- 116
Query: 477 ALFRIHLYLLNGPLLAFLFPETASRKIFVEAALYWIQHGMMCIIPYYLLRLGGVYNIEPI 656
+YLLN L + + E +Y+IQH M+ ++P YLL GG Y EP+
Sbjct: 117 ------IYLLNPCHLVTMM------HLPFELEIYYIQHVMLYVVPIYLLWKGGAYTPEPL 164
Query: 657 RDFNWSVFSYCLNLLYHFXILQII 728
F W++ S L YHF +LQI+
Sbjct: 165 SSFRWALLSTGLMFFYHFSVLQIL 188
>AL359079-1|CAI41537.1| 258|Homo sapiens transmembrane protein 164
protein.
Length = 258
Score = 73.3 bits (172), Expect = 8e-13
Identities = 60/204 (29%), Positives = 99/204 (48%), Gaps = 1/204 (0%)
Frame = +3
Query: 120 MFEWAYSGANKAVPRNVGPECAFFLTPQRKIIETIIVFLICVY-LLVKTYPILKIPIDTD 296
+ +W Y G + + N GP+CA FL+ Q++++E+++V + + +LV IL+
Sbjct: 9 LLDWLYGGVDPSFAGNGGPDCAAFLSWQQRLLESVVVLTLALLEILVALRHILR------ 62
Query: 297 YTKSDRGGKRXXXXXXXXXWGMEIGFKFASHTVIYLLNPCHVTTLIQIYLLAAPPSKIVT 476
TK D G E G + S ++ L+ C +T +++ A +K V
Sbjct: 63 QTKEDGRGSPGSQPEQVTQRPEE-GKESLSKNLL-LVALC-LTFGVEVGFKFA--TKTV- 116
Query: 477 ALFRIHLYLLNGPLLAFLFPETASRKIFVEAALYWIQHGMMCIIPYYLLRLGGVYNIEPI 656
+YLLN L + + E +Y+IQH M+ ++P YLL GG Y EP+
Sbjct: 117 ------IYLLNPCHLVTMM------HLPFELEIYYIQHVMLYVVPIYLLWKGGAYTPEPL 164
Query: 657 RDFNWSVFSYCLNLLYHFXILQII 728
F W++ S L YHF +LQI+
Sbjct: 165 SSFRWALLSTGLMFFYHFSVLQIL 188
>AK026332-1|BAB15450.1| 258|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22679 fis, clone HSI10687. ).
Length = 258
Score = 73.3 bits (172), Expect = 8e-13
Identities = 60/204 (29%), Positives = 99/204 (48%), Gaps = 1/204 (0%)
Frame = +3
Query: 120 MFEWAYSGANKAVPRNVGPECAFFLTPQRKIIETIIVFLICVY-LLVKTYPILKIPIDTD 296
+ +W Y G + + N GP+CA FL+ Q++++E+++V + + +LV IL+
Sbjct: 9 LLDWLYGGVDPSFAGNGGPDCAAFLSWQQRLLESVVVLTLALLEILVALRHILR------ 62
Query: 297 YTKSDRGGKRXXXXXXXXXWGMEIGFKFASHTVIYLLNPCHVTTLIQIYLLAAPPSKIVT 476
TK D G E G + S ++ L+ C +T +++ A +K V
Sbjct: 63 QTKEDGRGSPGSQPEQVTQRPEE-GKESLSKNLL-LVALC-LTFGVEVGFKFA--TKTV- 116
Query: 477 ALFRIHLYLLNGPLLAFLFPETASRKIFVEAALYWIQHGMMCIIPYYLLRLGGVYNIEPI 656
+YLLN L + + E +Y+IQH M+ ++P YLL GG Y EP+
Sbjct: 117 ------IYLLNPCHLVTMM------HLPFELEIYYIQHVMLYVVPIYLLWKGGAYTPEPL 164
Query: 657 RDFNWSVFSYCLNLLYHFXILQII 728
F W++ S L YHF +LQI+
Sbjct: 165 SSFRWALLSTGLMFFYHFSVLQIL 188
>BC120952-1|AAI20953.1| 305|Homo sapiens G protein-coupled receptor
141 protein.
Length = 305
Score = 29.9 bits (64), Expect = 9.8
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +3
Query: 387 HTVIYLLNPCHVTTLIQ-IYLLAAPPSKIVTALFRIHLYL 503
H+V L P +T LI+ ++ P K V+A+ IH+YL
Sbjct: 62 HSVFLLTVPFRLTYLIKKTWMFGLPFCKFVSAMLHIHMYL 101
>BC120951-1|AAI20952.1| 305|Homo sapiens G protein-coupled receptor
141 protein.
Length = 305
Score = 29.9 bits (64), Expect = 9.8
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +3
Query: 387 HTVIYLLNPCHVTTLIQ-IYLLAAPPSKIVTALFRIHLYL 503
H+V L P +T LI+ ++ P K V+A+ IH+YL
Sbjct: 62 HSVFLLTVPFRLTYLIKKTWMFGLPFCKFVSAMLHIHMYL 101
>AY288420-1|AAP72129.1| 305|Homo sapiens G protein-coupled receptor
141 protein.
Length = 305
Score = 29.9 bits (64), Expect = 9.8
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +3
Query: 387 HTVIYLLNPCHVTTLIQ-IYLLAAPPSKIVTALFRIHLYL 503
H+V L P +T LI+ ++ P K V+A+ IH+YL
Sbjct: 62 HSVFLLTVPFRLTYLIKKTWMFGLPFCKFVSAMLHIHMYL 101
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,369,400
Number of Sequences: 237096
Number of extensions: 2306217
Number of successful extensions: 3117
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3030
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3117
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8623170556
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -