Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25n02
         (666 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82081-5|CAB04958.1|  344|Caenorhabditis elegans Hypothetical pr...   124   4e-29
AL023844-7|CAA19533.1|  346|Caenorhabditis elegans Hypothetical ...   105   4e-23
Z92834-3|CAB07384.1|  328|Caenorhabditis elegans Hypothetical pr...    61   8e-10
Z78065-4|CAB01514.2|  344|Caenorhabditis elegans Hypothetical pr...    33   0.24 
AF125951-1|AAD14690.3|  326|Caenorhabditis elegans Hypothetical ...    33   0.24 
Z81117-2|CAB03314.2|  343|Caenorhabditis elegans Hypothetical pr...    29   3.9  
Z70782-3|CAA94841.1|  347|Caenorhabditis elegans Hypothetical pr...    28   6.8  
Z46794-12|CAA86778.2| 1468|Caenorhabditis elegans Hypothetical p...    28   6.8  
Z46794-11|CAA86785.2| 1470|Caenorhabditis elegans Hypothetical p...    28   6.8  
AF016654-1|AAB66028.1|  731|Caenorhabditis elegans Hypothetical ...    27   9.1  

>Z82081-5|CAB04958.1|  344|Caenorhabditis elegans Hypothetical
           protein W09H1.5 protein.
          Length = 344

 Score =  124 bits (300), Expect = 4e-29
 Identities = 69/167 (41%), Positives = 96/167 (57%), Gaps = 1/167 (0%)
 Frame = +2

Query: 167 RNLTSKQLVYSEFGDPLHVVKYRECQVPPLGS-QEVLVRMLAAPVNPADINTIQGKYPVK 343
           R  +++QLVY  + +P   ++ +   +    S  +VLV+ +AAP+NPAD+N IQG YPVK
Sbjct: 13  RAASTRQLVYEGYRNPPEAIQLKTVTIADKPSADQVLVQWIAAPINPADLNQIQGVYPVK 72

Query: 344 VNLPCVPXXXXXXXXXXXXXXXSRICPGNKVIVTKPVQGTWRDIAIFNKDVLRVVPDSLG 523
             LP V                S I  G+ VI  +   GTWR++ +  ++ L  + ++L 
Sbjct: 73  PALPAVGGNEGFGKVISVGSNVSSIKVGDHVIPDRSGLGTWRELGLHQENDLFPIDNTLS 132

Query: 524 TVEAATLTVNPCTAYRMLSDFKPVKDGLVVIQNGANSACGQNVIQIC 664
              AAT  VNP TAYRML DF  +K G  V QNGANSA G++VIQIC
Sbjct: 133 MEYAATFQVNPPTAYRMLKDFIDLKKGDTVAQNGANSAVGKHVIQIC 179


>AL023844-7|CAA19533.1|  346|Caenorhabditis elegans Hypothetical
           protein Y48A6B.9 protein.
          Length = 346

 Score =  105 bits (251), Expect = 4e-23
 Identities = 59/167 (35%), Positives = 89/167 (53%), Gaps = 1/167 (0%)
 Frame = +2

Query: 167 RNLTSKQLVYSEFGDPLHVVKYRECQVPPL-GSQEVLVRMLAAPVNPADINTIQGKYPVK 343
           + + S+ L+Y +FGDPL V++    +VP   GS E LV  LA+P+NP DIN IQG Y V+
Sbjct: 3   KTIRSQALIYRKFGDPLKVLQLETVEVPAEPGSGECLVEWLASPINPLDINRIQGNYAVR 62

Query: 344 VNLPCVPXXXXXXXXXXXXXXXSRICPGNKVIVTKPVQGTWRDIAIFNKDVLRVVPDSLG 523
             LP +                SR   G+ V +       W +  + + D L  + + + 
Sbjct: 63  AELPVI-GGSEGVGRVVKAGSGSRFKSGDHVTIFSANTPIWTEFGVVDDDELVKLDNRIP 121

Query: 524 TVEAATLTVNPCTAYRMLSDFKPVKDGLVVIQNGANSACGQNVIQIC 664
              AATL +NP TA+ ML  +  ++ G  +IQN ANS  G++VI++C
Sbjct: 122 LDLAATLMINPPTAWIMLKKYVNLQKGDYIIQNSANSGVGRSVIEMC 168


>Z92834-3|CAB07384.1|  328|Caenorhabditis elegans Hypothetical
           protein F39B2.3 protein.
          Length = 328

 Score = 60.9 bits (141), Expect = 8e-10
 Identities = 47/157 (29%), Positives = 69/157 (43%)
 Frame = +2

Query: 191 VYSEFGDPLHVVKYRECQVPPLGSQEVLVRMLAAPVNPADINTIQGKYPVKVNLPCVPXX 370
           V   FG P  V++  E  +P L   +VLVR  AA VNP D     G+Y    NLP VP  
Sbjct: 14  VVRRFGAP-DVIEAVESDMPRLEKNQVLVRNYAAGVNPVDTYIRAGQYGKLPNLPYVPGK 72

Query: 371 XXXXXXXXXXXXXSRICPGNKVIVTKPVQGTWRDIAIFNKDVLRVVPDSLGTVEAATLTV 550
                          +  G++V        T   +A+ N+     +P+ +   E A+L V
Sbjct: 73  DGAGFVELVGESVKNVKVGDRVWYGSEADSTAEYVAV-NRPF--ELPEGVSFEEGASLGV 129

Query: 551 NPCTAYRMLSDFKPVKDGLVVIQNGANSACGQNVIQI 661
              TAYR L      K G V++ +GA+   G  ++Q+
Sbjct: 130 PYLTAYRALFHLAGAKTGDVILVHGASGGVGSALMQL 166


>Z78065-4|CAB01514.2|  344|Caenorhabditis elegans Hypothetical
           protein T09E8.5 protein.
          Length = 344

 Score = 32.7 bits (71), Expect = 0.24
 Identities = 20/71 (28%), Positives = 36/71 (50%)
 Frame = -1

Query: 327 PCIVFMSAGLTGAASMRTNTSWLPSGGTWHSLYFTTCNGSPNSLYTSCLEVKLRTAPFMF 148
           P  V+++  LT A  ++   SW P   + HS+  ++     N+ Y   L+ K+ +  FM 
Sbjct: 257 PVYVWVTVVLTNAIDLQGIVSWSPCLMSTHSILMSSVMIVTNATYRRVLKEKI-SKLFML 315

Query: 147 TQLVAYDLKAE 115
           T+L+   L +E
Sbjct: 316 TRLIGNQLGSE 326


>AF125951-1|AAD14690.3|  326|Caenorhabditis elegans Hypothetical
           protein D2063.1 protein.
          Length = 326

 Score = 32.7 bits (71), Expect = 0.24
 Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
 Frame = +2

Query: 458 GTWRDIA-IFNKDVLRVVPDSLGTVEAATLTVNPCTAYRMLSDFKPVKDGLVVIQNGANS 634
           GT+++ A I + D +++ P S+    AA +     TAY+ L +   VK G +V   GA  
Sbjct: 127 GTFQEYATIRDVDAIKI-PKSMNMAAAAPVLCGGVTAYKALKE-SEVKSGQIVAVTGAGG 184

Query: 635 ACGQNVIQ 658
             G   IQ
Sbjct: 185 GLGSFAIQ 192


>Z81117-2|CAB03314.2|  343|Caenorhabditis elegans Hypothetical
           protein T06E6.4 protein.
          Length = 343

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 15/53 (28%), Positives = 25/53 (47%)
 Frame = -1

Query: 327 PCIVFMSAGLTGAASMRTNTSWLPSGGTWHSLYFTTCNGSPNSLYTSCLEVKL 169
           P  +F++  +T A  M+   SW P   + HS+   T     N+ Y   L+ K+
Sbjct: 256 PVYMFVAVIVTDAVDMQRIVSWAPCLMSTHSMLLVTVMIMSNASYRKVLKDKI 308


>Z70782-3|CAA94841.1|  347|Caenorhabditis elegans Hypothetical
           protein R04B5.5 protein.
          Length = 347

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = +2

Query: 416 ICPGNKVIVTKPVQGTWRDIAIFNKDVLRVVPDSLGTVEAATL 544
           +CP  +   T PV GT     + + D    +PD+L   + A +
Sbjct: 109 LCPEMRFFATPPVHGTLSRFVVHDADFCFKLPDNLSFEDGALI 151


>Z46794-12|CAA86778.2| 1468|Caenorhabditis elegans Hypothetical
           protein R06F6.8a protein.
          Length = 1468

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -1

Query: 243 WHSLYFTTCNGSPNSLYTSCLEVK 172
           W +L+  T  GSPN+L+  CL++K
Sbjct: 895 WRTLFDVT--GSPNALFEECLQLK 916


>Z46794-11|CAA86785.2| 1470|Caenorhabditis elegans Hypothetical
           protein R06F6.8b protein.
          Length = 1470

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -1

Query: 243 WHSLYFTTCNGSPNSLYTSCLEVK 172
           W +L+  T  GSPN+L+  CL++K
Sbjct: 895 WRTLFDVT--GSPNALFEECLQLK 916


>AF016654-1|AAB66028.1|  731|Caenorhabditis elegans Hypothetical
           protein C17A2.5 protein.
          Length = 731

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = -3

Query: 433 FVPRTYSTDFFTYLFN 386
           FVPR  ST FFT+L N
Sbjct: 368 FVPRNISTQFFTFLSN 383


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,882,968
Number of Sequences: 27780
Number of extensions: 284392
Number of successful extensions: 681
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 678
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)