Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25m24
         (757 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23517-10|AAB93341.3|  337|Caenorhabditis elegans Carbonic anhyd...   125   3e-29
U41539-1|AAB52498.1|  246|Caenorhabditis elegans Carbonic anhydr...    69   4e-12
U39743-2|AAA80437.6|  310|Caenorhabditis elegans Carbonic anhydr...    62   3e-10
U12966-4|AAA20616.1|  365|Caenorhabditis elegans Carbonic anhydr...    62   3e-10
AF000198-1|AAB53054.1|  319|Caenorhabditis elegans Carbonic anhy...    37   0.013
Z68118-4|CAD18873.1|  235|Caenorhabditis elegans Hypothetical pr...    34   0.095
Z68118-3|CAA92190.2|  280|Caenorhabditis elegans Hypothetical pr...    34   0.095
Z68222-2|CAA92498.1|  105|Caenorhabditis elegans Hypothetical pr...    31   0.88 
AC006655-6|AAF39878.2|  383|Caenorhabditis elegans Hypothetical ...    29   3.6  
AF016684-6|AAB66210.1|  272|Caenorhabditis elegans Hypothetical ...    28   6.2  
Z34802-8|CAH10787.1|  704|Caenorhabditis elegans Hypothetical pr...    28   8.2  
Z34802-7|CAA84338.2|  828|Caenorhabditis elegans Hypothetical pr...    28   8.2  

>U23517-10|AAB93341.3|  337|Caenorhabditis elegans Carbonic
           anhydrase protein 2 protein.
          Length = 337

 Score =  125 bits (302), Expect = 3e-29
 Identities = 56/130 (43%), Positives = 87/130 (66%), Gaps = 4/130 (3%)
 Frame = +2

Query: 356 YDGISGPAFWGLINPEWSLCNKGRRQSPVNLEPEKLLFDPNLRFLHIDKHRINGLISNTG 535
           Y  + GP FWGL++ +W +C  G+ QSPVN++P +LL+DP+L  ++I+ + +  +  NTG
Sbjct: 11  YPCVIGPDFWGLLHGDWRMCTAGQMQSPVNIDPSQLLYDPHLMPINIEGNIVEAVFENTG 70

Query: 536 HSVIFTVEN-ETRHHINITGGP-LSYKYQFHEIHIHYGLHD--QFGSEHAINGYSFPAEI 703
              + TV++   R  INITGGP + Y+Y+ H+I +H+G  D  + GSEH ++   FPAEI
Sbjct: 71  QLPVVTVKDLPNRPTINITGGPTMPYRYKLHQISVHFGRADEGEKGSEHTVDRVRFPAEI 130

Query: 704 QIFGFNSQLY 733
           Q+  +NS LY
Sbjct: 131 QLLAYNSALY 140


>U41539-1|AAB52498.1|  246|Caenorhabditis elegans Carbonic anhydrase
           protein 3 protein.
          Length = 246

 Score = 68.9 bits (161), Expect = 4e-12
 Identities = 38/99 (38%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
 Frame = +2

Query: 422 GRRQSPVNL---EPEKLLFDPNLRFLHIDKHRINGLISNTGHSVIFTVENETRHHINITG 592
           G+ QSP+N+   E E+      ++F++ D H I G I N GHSV  T E  + H   I G
Sbjct: 21  GQHQSPINIDLGEVERKDTHDGIKFVNYD-HPIQGDIVNNGHSVQMTPELRSEHP-EIYG 78

Query: 593 GPLSYKYQFHEIHIHYGLHDQFGSEHAINGYSFPAEIQI 709
           G L   Y+  + H H+G +D  GSEH + G  +PAE+ +
Sbjct: 79  GGLDQVYRLVQYHFHWGENDNEGSEHTLGGLRYPAELHL 117


>U39743-2|AAA80437.6|  310|Caenorhabditis elegans Carbonic anhydrase
           protein 5 protein.
          Length = 310

 Score = 62.5 bits (145), Expect = 3e-10
 Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 4/142 (2%)
 Frame = +2

Query: 296 LQILLYFAAVTGVSWEEWWTYDGISGPAFWGLINPEWSLCNKGRRQSPVNLEPEKLLFDP 475
           L + L      G   +  W YD  +GP  W         C    +QSP+++    + +  
Sbjct: 10  LLVALLVVVSCGPGSDHGWGYDENNGPDTWQ------GKCQNHLKQSPIDIRAPDVDY-A 62

Query: 476 NLRFLHIDKHRINGLI--SNTGHSVIFTVENETRHHIN--ITGGPLSYKYQFHEIHIHYG 643
            L  +H   + ++G I  SNTG + +F    E+  H    I GG L ++Y+  + H+H+G
Sbjct: 63  LLHRMHFLNYDMDGKIELSNTGRT-LFAGGFESWQHKQPMIQGGGLKHRYKLAQFHLHWG 121

Query: 644 LHDQFGSEHAINGYSFPAEIQI 709
            +D  GSEHA+    +PAE+ +
Sbjct: 122 QNDAVGSEHAMGSLHYPAELHL 143


>U12966-4|AAA20616.1|  365|Caenorhabditis elegans Carbonic anhydrase
           protein 1 protein.
          Length = 365

 Score = 62.5 bits (145), Expect = 3e-10
 Identities = 22/47 (46%), Positives = 35/47 (74%), Gaps = 2/47 (4%)
 Frame = +2

Query: 350 WTYDG--ISGPAFWGLINPEWSLCNKGRRQSPVNLEPEKLLFDPNLR 484
           W+YD     GP FWGL+  +W +C KGR QSP++++P++LLFD +++
Sbjct: 30  WSYDSDVFGGPHFWGLVEKDWWMCKKGRLQSPIDIQPDRLLFDASVK 76



 Score = 60.5 bits (140), Expect = 1e-09
 Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
 Frame = +2

Query: 527 NTGHSVIFTVENETRH-HINITGGPL-SYKYQFHEIHIHYGLHDQFGSEHAINGYSFPAE 700
           NTG  V   +   ++   +NIT GPL  Y+Y+   I  H G  ++ GSEH ING  FP E
Sbjct: 153 NTGQMVRVRIGYSSKKPSVNITSGPLYGYRYRVQRIDFHMGRKNENGSEHTINGRRFPME 212

Query: 701 IQIFGFNSQLY 733
           +Q+  +N+ LY
Sbjct: 213 VQLVAYNTDLY 223


>AF000198-1|AAB53054.1|  319|Caenorhabditis elegans Carbonic
           anhydrase protein 6 protein.
          Length = 319

 Score = 37.1 bits (82), Expect = 0.013
 Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 3/105 (2%)
 Frame = +2

Query: 422 GRRQSPVNLEPEKLLFDPNLRFLHID-KHRINGLIS--NTGHSVIFTVENETRHHINITG 592
           GR QSP+++ P    F  +L+  H +  +   G     N G+S+    E  +   + I+ 
Sbjct: 65  GRTQSPIDIVPVITAFGEHLQNAHFEVTYESTGEFKAVNDGNSIWLMREGNSSE-LAISF 123

Query: 593 GPLSYKYQFHEIHIHYGLHDQFGSEHAINGYSFPAEIQIFGFNSQ 727
            P   +Y    ++ H+      GSEH I G  +  E+ +   N++
Sbjct: 124 LP-EEQYHLDAVNFHWATEPMNGSEHTIGGVGYAGEMHLIHRNTR 167


>Z68118-4|CAD18873.1|  235|Caenorhabditis elegans Hypothetical
           protein R01E6.3b protein.
          Length = 235

 Score = 34.3 bits (75), Expect = 0.095
 Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 6/110 (5%)
 Frame = +2

Query: 425 RRQSPVNLEPEKLLFDPNL---RFLHIDKHR---INGLISNTGHSVIFTVENETRHHINI 586
           +RQSP+++ P+ +  D ++     L+ID       + L+S  G  V   V+      +  
Sbjct: 5   QRQSPIDIVPQHVCCDTDVCKADALNIDYKSGDCCDVLVSEGGFLV--NVKRNCGTFLTA 62

Query: 587 TGGPLSYKYQFHEIHIHYGLHDQFGSEHAINGYSFPAEIQIFGFNSQLYS 736
              P S K+   + H H+G + + GSEH ++G     E+    +N+   S
Sbjct: 63  NHLPSS-KFALAQFHAHWGSNSKEGSEHFLDGKQLSGEVHFVFWNTSYES 111


>Z68118-3|CAA92190.2|  280|Caenorhabditis elegans Hypothetical
           protein R01E6.3a protein.
          Length = 280

 Score = 34.3 bits (75), Expect = 0.095
 Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 6/110 (5%)
 Frame = +2

Query: 425 RRQSPVNLEPEKLLFDPNL---RFLHIDKHR---INGLISNTGHSVIFTVENETRHHINI 586
           +RQSP+++ P+ +  D ++     L+ID       + L+S  G  V   V+      +  
Sbjct: 50  QRQSPIDIVPQHVCCDTDVCKADALNIDYKSGDCCDVLVSEGGFLV--NVKRNCGTFLTA 107

Query: 587 TGGPLSYKYQFHEIHIHYGLHDQFGSEHAINGYSFPAEIQIFGFNSQLYS 736
              P S K+   + H H+G + + GSEH ++G     E+    +N+   S
Sbjct: 108 NHLPSS-KFALAQFHAHWGSNSKEGSEHFLDGKQLSGEVHFVFWNTSYES 156


>Z68222-2|CAA92498.1|  105|Caenorhabditis elegans Hypothetical
           protein ZK1251.2 protein.
          Length = 105

 Score = 31.1 bits (67), Expect = 0.88
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +3

Query: 201 KMCRYKFQCRAMK*ACRRQCTDSWVRLQCLP 293
           K C    +       CR +CTD ++R QC P
Sbjct: 75  KACESNTEVNIASKCCREECTDDFIRKQCCP 105


>AC006655-6|AAF39878.2|  383|Caenorhabditis elegans Hypothetical
           protein H10D18.6 protein.
          Length = 383

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
 Frame = -2

Query: 270 TSLCIVYDTL---TSWPDIGTYNDTFSLKISIINLFHRRLISFNIFE 139
           T+ C  YD L   T  P+  +YN + + +++ +  F  RL ++NIF+
Sbjct: 54  TTSCTNYDVLLPATGEPEDTSYNPSMNSQVTNVMNFWERLENYNIFQ 100


>AF016684-6|AAB66210.1|  272|Caenorhabditis elegans Hypothetical
           protein F45C12.12 protein.
          Length = 272

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 25/102 (24%), Positives = 41/102 (40%), Gaps = 3/102 (2%)
 Frame = +2

Query: 449 EPEKLLFD---PNLRFLHIDKHRINGLISNTGHSVIFTVENETRHHINITGGPLSYKYQF 619
           +PE  +F+     L  L ID+HR+N  + N     +     ETR  + +   P+  K+ +
Sbjct: 70  DPENPIFELIHRKLDILDIDEHRVNFSVENKNTQSL----AETRAILELILTPIREKFSY 125

Query: 620 HEIHIHYGLHDQFGSEHAINGYSFPAEIQIFGFNSQLYSELF 745
            E+ +     D       I G           F+S  + ELF
Sbjct: 126 REMFMPSQKTDAI---LMIGGEKLHVNKAFLSFHSDFFHELF 164


>Z34802-8|CAH10787.1|  704|Caenorhabditis elegans Hypothetical
           protein M88.5b protein.
          Length = 704

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 614 QFHEIHIHYGLHDQFGSEHAINGY 685
           Q H++ IH+  H Q   +HA  GY
Sbjct: 110 QMHQMQIHHQQHPQMMQQHAQQGY 133


>Z34802-7|CAA84338.2|  828|Caenorhabditis elegans Hypothetical
           protein M88.5a protein.
          Length = 828

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 614 QFHEIHIHYGLHDQFGSEHAINGY 685
           Q H++ IH+  H Q   +HA  GY
Sbjct: 234 QMHQMQIHHQQHPQMMQQHAQQGY 257


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,131,735
Number of Sequences: 27780
Number of extensions: 420104
Number of successful extensions: 1058
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1004
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1051
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)