Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25m11
         (332 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81486-2|CAB03984.1|  461|Caenorhabditis elegans Hypothetical pr...    27   2.5  
AC006676-6|AAK71384.2|  652|Caenorhabditis elegans Hypothetical ...    27   3.3  
Z81015-6|CAE17725.1|  209|Caenorhabditis elegans Hypothetical pr...    27   4.3  
U61944-5|AAB03121.2|  482|Caenorhabditis elegans Hypothetical pr...    26   5.7  
U53148-3|AAB37077.1|  282|Caenorhabditis elegans Ground-like (gr...    26   5.7  
AC024783-1|AAY86294.1|  404|Caenorhabditis elegans Hypothetical ...    26   7.5  
AF098994-5|AAC67473.3|  579|Caenorhabditis elegans Hypothetical ...    25   10.0 
AF098994-4|AAO21390.1|  606|Caenorhabditis elegans Hypothetical ...    25   10.0 

>Z81486-2|CAB03984.1|  461|Caenorhabditis elegans Hypothetical
          protein C53A5.3 protein.
          Length = 461

 Score = 27.5 bits (58), Expect = 2.5
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +3

Query: 3  MDLNKISIVHSLD*HIGTFYYGKGH 77
          M+  K  + +  D +IG +YYG+GH
Sbjct: 8  MEHGKRRVAYYYDSNIGNYYYGQGH 32


>AC006676-6|AAK71384.2|  652|Caenorhabditis elegans Hypothetical
           protein M04F3.5 protein.
          Length = 652

 Score = 27.1 bits (57), Expect = 3.3
 Identities = 12/46 (26%), Positives = 22/46 (47%)
 Frame = -3

Query: 147 CHPVVKAAGSCILRVPNMRVRPDNVLYHNKKYLCVNPSYEQSKFYS 10
           CH + K A   + +V + + RPD    + ++ +C     EQ   +S
Sbjct: 117 CHDMDKTAAKHVKKVRSRKQRPDVTAMNEQREICTKVLTEQRTQFS 162


>Z81015-6|CAE17725.1|  209|Caenorhabditis elegans Hypothetical
           protein C11E4.8 protein.
          Length = 209

 Score = 26.6 bits (56), Expect = 4.3
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -1

Query: 329 FFSVLKFIFAVTNQGKNQNKS*IFHYLL 246
           FF  L F F VT++ +  N S  FH  L
Sbjct: 118 FFLTLLFFFIVTDEDERTNSSHFFHRFL 145


>U61944-5|AAB03121.2|  482|Caenorhabditis elegans Hypothetical
           protein T12E12.1 protein.
          Length = 482

 Score = 26.2 bits (55), Expect = 5.7
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -3

Query: 192 ES*NYEAEGSQSLPSCHPVVKAAGSC 115
           E+ NY +  ++  P CH  ++ AG C
Sbjct: 275 ETANYISAHTKDCPQCHSCIEKAGGC 300


>U53148-3|AAB37077.1|  282|Caenorhabditis elegans Ground-like (grd
           related) protein10 protein.
          Length = 282

 Score = 26.2 bits (55), Expect = 5.7
 Identities = 19/69 (27%), Positives = 27/69 (39%), Gaps = 1/69 (1%)
 Frame = +3

Query: 9   LNKISIVHSLD*H-IGTFYYGKGHYPGAPSCLGREGCKTQPP*QQDGSLVMTVIPPLRNF 185
           L  + ++ SL  + +  F++G     GA  C  R  C   PP    GS V  V    +  
Sbjct: 5   LTLVVVILSLSLYSVNGFFFGAAGGGGACGCAPRPACPPPPPSGCSGSGVRAVARGAKTM 64

Query: 186 MILQKQLSP 212
              Q   SP
Sbjct: 65  TFDQPIYSP 73


>AC024783-1|AAY86294.1|  404|Caenorhabditis elegans Hypothetical
           protein Y45G5AL.2 protein.
          Length = 404

 Score = 25.8 bits (54), Expect = 7.5
 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
 Frame = -2

Query: 253 IFFLIVQAFYKTL-HGDSCF*RIIKLRSGGITVITKLPSCCQGGWVLHPSR 104
           +F L+V  + + L H D  F ++ K    GI  I  L S  +    +HP R
Sbjct: 31  VFRLVVANYKRFLGHQDRLFEKLFKSYDPGINAIYTLHSVPETNGTVHPPR 81


>AF098994-5|AAC67473.3|  579|Caenorhabditis elegans Hypothetical
           protein T06A4.1a protein.
          Length = 579

 Score = 25.4 bits (53), Expect = 10.0
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = -3

Query: 81  DNVLYHNKKYLCVNPSYEQSKFYSNPL 1
           DN  YHN K + +NP  E S  Y   L
Sbjct: 25  DNAGYHNFKLIRINPETEGSVKYLRSL 51


>AF098994-4|AAO21390.1|  606|Caenorhabditis elegans Hypothetical
           protein T06A4.1b protein.
          Length = 606

 Score = 25.4 bits (53), Expect = 10.0
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = -3

Query: 81  DNVLYHNKKYLCVNPSYEQSKFYSNPL 1
           DN  YHN K + +NP  E S  Y   L
Sbjct: 25  DNAGYHNFKLIRINPETEGSVKYLRSL 51


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,579,307
Number of Sequences: 27780
Number of extensions: 148260
Number of successful extensions: 471
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 471
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 408121444
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)