Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte25m04
(667 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 33 0.003
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 27 0.21
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 24 1.1
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 22 4.6
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 22 4.6
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 22 4.6
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 22 4.6
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 22 4.6
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 22 6.0
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 6.0
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 6.0
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 22 6.0
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 22 6.0
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 22 6.0
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 22 6.0
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 21 8.0
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 21 8.0
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 32.7 bits (71), Expect = 0.003
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +2
Query: 383 LTELKCLRSLNVRHNKVKTSGIPAELFHLEELTTLDLSHNRLKEVPEGL-EKAKSLLVLN 559
L +L+ L+ L+++ N + A L L L T + S+N L +PEGL + L ++
Sbjct: 233 LLDLRQLQELHLQRNAIVEIAGDA-LTGLTVLRTFNASYNSLDSLPEGLFASTRDLREIH 291
Query: 560 LSHNRIETIP 589
L++N + +P
Sbjct: 292 LAYNGLRDLP 301
Score = 31.9 bits (69), Expect = 0.006
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = +2
Query: 449 PAELFHLEELTTLDLSHNRLKEVPEGLEKAKSLLVLNLSHNRI 577
P + +L LDLS N L VP+ L L L+L NRI
Sbjct: 424 PLAFRNCSDLKELDLSGNELTSVPDALRDLALLKTLDLGENRI 466
Score = 30.7 bits (66), Expect = 0.013
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +2
Query: 377 GELTELKCLRSLNVRHNKVKTSGIPAELFHLE-ELTTLDLSHNRLKEVPEGLEKAKSLLV 553
G L +L L+ LN+ NKV+ + F L + L N L ++ SLL+
Sbjct: 496 GMLWDLPNLQILNLARNKVQH--VERYAFERNMRLEAIRLDGNFLSDINGVFTSIASLLL 553
Query: 554 LNLSHNRIE 580
LNLS N IE
Sbjct: 554 LNLSENHIE 562
Score = 26.6 bits (56), Expect = 0.21
Identities = 18/64 (28%), Positives = 36/64 (56%)
Frame = +2
Query: 401 LRSLNVRHNKVKTSGIPAELFHLEELTTLDLSHNRLKEVPEGLEKAKSLLVLNLSHNRIE 580
L+ L++ N +++ G ++ ++ TLD SHNR+ E+ L S+ +L +++N I
Sbjct: 573 LKWLDIHGNFIESLGNYYKIRD-SKVKTLDASHNRITEL-SPLSVPDSVELLFINNNYIN 630
Query: 581 TIPP 592
+ P
Sbjct: 631 LVRP 634
Score = 23.8 bits (49), Expect = 1.5
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +2
Query: 401 LRSLNVRHNKVKTSGIPAELFHLEELTTLDLSHNRLKEVPEG 526
L+ L++ N++ + +P L L L TLDL NR+ G
Sbjct: 433 LKELDLSGNEL--TSVPDALRDLALLKTLDLGENRISNFYNG 472
Score = 22.2 bits (45), Expect = 4.6
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Frame = +2
Query: 392 LKCLRSLNVRHNKVKT-SGIPAE-LFHLEELTTLDLSHNRLKEVPE-GLEKAKSLLVLNL 562
L L+ L++ N+++ G E L HL EL L +N + + +SL +L L
Sbjct: 841 LNNLQILHLEDNRIRELKGFEFERLSHLRELY---LQNNLIGFIGNLTFLPLRSLEILRL 897
Query: 563 SHNRIETIP 589
S NR+ T P
Sbjct: 898 SGNRLVTFP 906
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 26.6 bits (56), Expect = 0.21
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -2
Query: 399 HFNSVSSPNNFSRLFFFKERFSNFINF 319
HFN+V NF R FFF E +N ++F
Sbjct: 2 HFNNVIKYINFDR-FFFIEGMTNVLDF 27
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 24.2 bits (50), Expect = 1.1
Identities = 12/17 (70%), Positives = 14/17 (82%), Gaps = 1/17 (5%)
Frame = -3
Query: 659 VGSPKDYEIDPEI-ISQ 612
VGSP+D I+PEI ISQ
Sbjct: 288 VGSPRDSPIEPEIEISQ 304
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 22.2 bits (45), Expect = 4.6
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +3
Query: 192 LHFSNNKYCCRTINFLMLFAI*LDCNG 272
+HF+ Y T+N+LM + L C G
Sbjct: 162 VHFALRIYRNGTVNYLMRRHLILSCQG 188
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 22.2 bits (45), Expect = 4.6
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +3
Query: 192 LHFSNNKYCCRTINFLMLFAI*LDCNG 272
+HF+ Y T+N+LM + L C G
Sbjct: 162 VHFALRIYRNGTVNYLMRRHLILSCQG 188
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 22.2 bits (45), Expect = 4.6
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +3
Query: 192 LHFSNNKYCCRTINFLMLFAI*LDCNG 272
+HF+ Y T+N+LM + L C G
Sbjct: 213 VHFALRIYRNGTVNYLMRRHLILSCQG 239
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 22.2 bits (45), Expect = 4.6
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +3
Query: 192 LHFSNNKYCCRTINFLMLFAI*LDCNG 272
+HF+ Y T+N+LM + L C G
Sbjct: 162 VHFALRIYRNGTVNYLMRRHLILSCQG 188
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 22.2 bits (45), Expect = 4.6
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = -2
Query: 384 SSPNNFSRLFFFKERFSNFINFPSSSGISQRFVLSSLN 271
SSP+ S FF + + +GIS FV LN
Sbjct: 89 SSPSPSSPSSFFSSVSPTSLGSENYTGISDLFVFDDLN 126
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = +1
Query: 316 RKVNEIGKPFLEKEQSRKVIW*THRVK 396
R+ E KP E+E+ + V+ +++K
Sbjct: 164 RRTGEGSKPIFEREEIKNVLTKINKIK 190
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = +1
Query: 316 RKVNEIGKPFLEKEQSRKVIW*THRVK 396
R+ E KP E+E+ + V+ +++K
Sbjct: 164 RRTGEGSKPIFEREEIKNVLTKINKIK 190
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = +1
Query: 316 RKVNEIGKPFLEKEQSRKVIW*THRVK 396
R+ E KP E+E+ + V+ +++K
Sbjct: 164 RRTGEGSKPIFEREEIKNVLTKINKIK 190
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = +1
Query: 316 RKVNEIGKPFLEKEQSRKVIW*THRVK 396
R+ E KP E+E+ + V+ +++K
Sbjct: 153 RRTGEGSKPIFEREEIKNVLTKINKIK 179
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = +1
Query: 316 RKVNEIGKPFLEKEQSRKVIW*THRVK 396
R+ E KP E+E+ + V+ +++K
Sbjct: 169 RRTGEGSKPIFEREEIKNVLTKINKIK 195
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = +1
Query: 316 RKVNEIGKPFLEKEQSRKVIW*THRVK 396
R+ E KP E+E+ + V+ +++K
Sbjct: 164 RRTGEGSKPIFEREEIKNVLTKINKIK 190
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = +1
Query: 316 RKVNEIGKPFLEKEQSRKVIW*THRVK 396
R+ E KP E+E+ + V+ +++K
Sbjct: 164 RRTGEGSKPIFEREEIKNVLTKINKIK 190
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.4 bits (43), Expect = 8.0
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = -1
Query: 211 LLFEKCRYRL*DDIILYKCYSIIAT 137
L+ + +L +D+I Y C S++A+
Sbjct: 429 LILGELSEKLREDVINYNCRSLVAS 453
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 21.4 bits (43), Expect = 8.0
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = -1
Query: 211 LLFEKCRYRL*DDIILYKCYSIIAT 137
L+ + +L +D+I Y C S++A+
Sbjct: 397 LILGELSEKLREDVINYNCRSLVAS 421
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,516
Number of Sequences: 438
Number of extensions: 3593
Number of successful extensions: 25
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20099475
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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