Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte25l14
(639 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0216 + 1843413-1843509,1844583-1844694,1844841-1844908,184... 36 0.036
09_04_0005 + 13612060-13612291,13612381-13612510,13612726-136129... 35 0.063
05_07_0239 - 28599452-28599564,28599685-28599799,28600051-286001... 33 0.14
03_03_0039 - 13986844-13986907,13987219-13987273,13987492-139876... 33 0.14
05_07_0152 + 28044733-28045032,28045131-28045220,28045770-280458... 32 0.33
05_07_0151 + 28038178-28038480,28038578-28038667,28039130-280391... 32 0.44
04_04_1021 + 30190403-30190450,30191245-30192924 29 3.1
04_04_0481 - 25541355-25541849,25541933-25542535,25542730-255428... 29 4.1
10_01_0052 - 750902-751697,753077-753603,753696-753913,754012-75... 28 5.4
07_01_0365 + 2718707-2718839,2719335-2719405,2719512-2719955,272... 28 5.4
04_04_1022 + 30195703-30195753,30195925-30195987,30197535-301978... 28 5.4
12_02_1052 - 25698263-25698394,25698587-25698679,25698945-256989... 28 7.2
10_06_0142 - 11175732-11176545,11176924-11177450,11177544-111777... 27 9.5
07_01_0635 + 4753919-4754090,4754200-4754258,4754377-4754432,475... 27 9.5
>01_01_0216 +
1843413-1843509,1844583-1844694,1844841-1844908,
1845165-1845297,1845404-1845503,1845562-1845722,
1846095-1846188,1846273-1846426,1846597-1846743,
1846819-1846892,1846985-1847073,1847161-1847275,
1847569-1847751
Length = 508
Score = 35.5 bits (78), Expect = 0.036
Identities = 21/62 (33%), Positives = 27/62 (43%)
Frame = +1
Query: 448 LLYLESEESSIPTTAYQGSWIVSIMILCSALTPIPSAYLADKFGXKTTLLLGAIPFIIGW 627
L YL + QG W+VS + + LADKFG T +L AIP +G
Sbjct: 76 LEYLAKDLGISENAVLQG-WVVSTTLAGATAGSFTGGALADKFGRTRTFILDAIPLAVGA 134
Query: 628 IL 633
L
Sbjct: 135 FL 136
>09_04_0005 +
13612060-13612291,13612381-13612510,13612726-13612926,
13613086-13613185,13613513-13613559,13613871-13613964,
13614042-13614192,13614777-13614923,13614994-13615067,
13615288-13615376,13615840-13615954,13616104-13616301
Length = 525
Score = 34.7 bits (76), Expect = 0.063
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +1
Query: 508 IVSIMILCSALTPIPSAYLADKFGXKTTLLLGAIPFIIGWIL 633
+VSI I+ + + S+ L D FG K TL + +IP I+G +L
Sbjct: 146 VVSIFIVGAFFGSLGSSALVDNFGCKRTLQIDSIPLILGALL 187
>05_07_0239 -
28599452-28599564,28599685-28599799,28600051-28600116,
28600270-28600329,28600571-28600617,28601118-28601202,
28601554-28601646,28601727-28601791,28601942-28602017,
28602110-28602175,28603082-28603141,28603400-28603489,
28603594-28603893
Length = 411
Score = 33.5 bits (73), Expect = 0.14
Identities = 21/69 (30%), Positives = 37/69 (53%)
Frame = +1
Query: 430 GWPSPTLLYLESEESSIPTTAYQGSWIVSIMILCSALTPIPSAYLADKFGXKTTLLLGAI 609
G+ SPT ++ S + T + S S+ + + + I S +A+ G K +L++ AI
Sbjct: 81 GFSSPTQ---DAIISDLGLTLSEFSLFGSLSNVGAMVGAIASGQIAEYIGRKGSLMIAAI 137
Query: 610 PFIIGWILV 636
P IIGW+ +
Sbjct: 138 PNIIGWLAI 146
>03_03_0039 - 13986844-13986907,13987219-13987273,13987492-13987606,
13987652-13987774,13987962-13988015,13988352-13988411,
13988522-13988584,13988790-13988863,13989177-13989261,
13989376-13989456,13989764-13989856,13990275-13990339,
13990407-13990482,13990570-13990635,13991094-13991153,
13991233-13991322,13991755-13991817,13992502-13992625,
13993031-13993271,13993355-13993624,13993715-13994089,
13994178-13994381,13994455-13995136,13995231-13995279,
13995362-13995488,13995564-13996258,13996718-13996965
Length = 1433
Score = 33.5 bits (73), Expect = 0.14
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +1
Query: 514 SIMILCSALTPIPSAYLADKFGXKTTLLLGAIPFIIGWILV 636
S++ + + + + S LAD G KTT+ L AI I+GW +
Sbjct: 1032 SVLTIGAMIGALTSGRLADSLGRKTTMGLAAIIGIVGWFTI 1072
>05_07_0152 +
28044733-28045032,28045131-28045220,28045770-28045829,
28045912-28045977,28046161-28046226,28046330-28046405,
28046721-28046785,28046879-28046971,28047302-28047322,
28047600-28047692,28047939-28047998,28048157-28048222,
28048314-28048373,28048498-28048612,28048738-28048850
Length = 447
Score = 32.3 bits (70), Expect = 0.33
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 547 IPSAYLADKFGXKTTLLLGAIPFIIGWILV 636
I S +A+ G K +L++ AIP IIGW+ +
Sbjct: 117 IASGQMAEYIGRKGSLMIAAIPNIIGWLAI 146
>05_07_0151 +
28038178-28038480,28038578-28038667,28039130-28039189,
28039274-28039339,28039562-28039627,28039719-28039794,
28039972-28040036,28040115-28040192,28040362-28040442,
28040526-28040610,28040702-28040748,28040969-28041028,
28041179-28041244,28041327-28041386,28041524-28041638,
28041733-28041845
Length = 476
Score = 31.9 bits (69), Expect = 0.44
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +1
Query: 547 IPSAYLADKFGXKTTLLLGAIPFIIGWILV 636
I S +A+ G K +L++ A+P IIGW+ +
Sbjct: 118 IASGQMAEYIGRKGSLIIAAVPNIIGWLAI 147
>04_04_1021 + 30190403-30190450,30191245-30192924
Length = 575
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +1
Query: 532 SALTPIPSAYLADK-FGXKTTLLLGAIPFIIGWILV 636
S LTP+ A +AD FG T+L+ + +++G +LV
Sbjct: 90 SYLTPVFGAIIADTFFGNYNTILVSLVFYLLGMVLV 125
>04_04_0481 -
25541355-25541849,25541933-25542535,25542730-25542837,
25542925-25543260,25543391-25543461,25543692-25543824
Length = 581
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/66 (22%), Positives = 34/66 (51%)
Frame = +1
Query: 439 SPTLLYLESEESSIPTTAYQGSWIVSIMILCSALTPIPSAYLADKFGXKTTLLLGAIPFI 618
S LLY+ + +++ + IVS+ + + + ++ DKFG K ++L+ F+
Sbjct: 48 SGALLYIRDDFTAVEKSTVLRETIVSMAVAGAIVGAGFGGWMNDKFGRKPSILIADSLFL 107
Query: 619 IGWILV 636
G +++
Sbjct: 108 AGALIM 113
>10_01_0052 -
750902-751697,753077-753603,753696-753913,754012-754114,
754337-754393
Length = 566
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 511 VSIMILCSALTPIPSAYLADKF-GXKTTLLLGAIPFIIGWILV 636
VSI I S TP+ A+LAD + G T ++ IIG ++V
Sbjct: 89 VSIWIGTSFFTPLIGAFLADTYWGRYWTTVISLFIIIIGMLIV 131
>07_01_0365 +
2718707-2718839,2719335-2719405,2719512-2719955,
2720660-2721802
Length = 596
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/62 (22%), Positives = 29/62 (46%)
Frame = +1
Query: 439 SPTLLYLESEESSIPTTAYQGSWIVSIMILCSALTPIPSAYLADKFGXKTTLLLGAIPFI 618
S LLY+ + S+ + IVS+ + + + + D++G +T++L+ F
Sbjct: 48 SGALLYIRDDFPSVDKNTWLQEMIVSMAVAGAIIGAAIGGWANDRYGRRTSILVADALFF 107
Query: 619 IG 624
G
Sbjct: 108 AG 109
>04_04_1022 +
30195703-30195753,30195925-30195987,30197535-30197843,
30197934-30199292
Length = 593
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +1
Query: 532 SALTPIPSAYLADKF-GXKTTLLLGAIPFIIGWILV 636
S LTP+ A +AD F G T+L+ + +++G +LV
Sbjct: 111 SYLTPVFGAIIADTFWGNYNTILVSLVFYLLGMMLV 146
>12_02_1052 -
25698263-25698394,25698587-25698679,25698945-25698995,
25699074-25699258,25699361-25699407,25699704-25699918
Length = 240
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +3
Query: 495 PRIMDSLNNDTLLGSNTDSIRLSRRQIRXKNYTASRSYTLH 617
PR++ + D L+ +L+R +++ + T SRSY H
Sbjct: 153 PRLVPEAHLDVLVEDKCAKNQLNREKVQFQQRTGSRSYIAH 193
>10_06_0142 -
11175732-11176545,11176924-11177450,11177544-11177761,
11177916-11177961,11178203-11178253
Length = 551
Score = 27.5 bits (58), Expect = 9.5
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +1
Query: 427 YGWPSPTLLYLESEESSIPTTAYQGSWIVSIMILCSALTPIPSAYLADKF-GXKTTLLLG 603
YG + YL S A Q VSI I TP+ A+LAD + G T+++
Sbjct: 43 YGVSKNLVTYLTSVLHESNVNAAQS---VSIWIGSCFFTPLIGAFLADTYWGRYWTVVMS 99
Query: 604 AIPFIIGWILV 636
+ I+G I++
Sbjct: 100 ILVIILGMIVL 110
>07_01_0635 +
4753919-4754090,4754200-4754258,4754377-4754432,
4754698-4754842,4755506-4755580,4755844-4755933,
4756218-4756295,4757879-4758376,4758512-4758997
Length = 552
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 534 GSNTDSIRLSRRQIRXKNYTASRSYTLHNRLDTCY 638
G + D++ SRR +R S TL N L CY
Sbjct: 65 GGDADAVSTSRRALRSAKIPESEFTTLPNGLKFCY 99
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,983,312
Number of Sequences: 37544
Number of extensions: 215032
Number of successful extensions: 485
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 481
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 485
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1573040476
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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