Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25l14
         (639 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002196-9|AAV34797.1|  475|Caenorhabditis elegans Hypothetical ...    36   0.032
AF002196-8|AAB53976.2|  586|Caenorhabditis elegans Hypothetical ...    36   0.032
U12965-9|AAA20605.3|  522|Caenorhabditis elegans Hypothetical pr...    31   0.92 
AC025726-24|AAK73926.2|  447|Caenorhabditis elegans Hypothetical...    29   2.1  
Z93391-2|CAB07681.1|  490|Caenorhabditis elegans Hypothetical pr...    28   6.5  
Z83232-1|CAB05755.3| 1764|Caenorhabditis elegans Hypothetical pr...    27   8.6  
AL021497-3|CAA16405.1|  613|Caenorhabditis elegans Hypothetical ...    27   8.6  
AB162421-1|BAD36749.1| 1766|Caenorhabditis elegans plexin protein.     27   8.6  

>AF002196-9|AAV34797.1|  475|Caenorhabditis elegans Hypothetical
           protein C09D4.1b protein.
          Length = 475

 Score = 35.5 bits (78), Expect = 0.032
 Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
 Frame = +1

Query: 505 WIVSIMILCSALTPIPSAYLADKFGXKTTLLLGAIPFIIG-WILVI 639
           W   I +L   L  IP+A+L DK+G + ++LLGA+   +G WI ++
Sbjct: 80  WTSMIYMLTYILFFIPAAWLLDKWGLRLSVLLGALGNCVGAWIKLL 125


>AF002196-8|AAB53976.2|  586|Caenorhabditis elegans Hypothetical
           protein C09D4.1a protein.
          Length = 586

 Score = 35.5 bits (78), Expect = 0.032
 Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
 Frame = +1

Query: 505 WIVSIMILCSALTPIPSAYLADKFGXKTTLLLGAIPFIIG-WILVI 639
           W   I +L   L  IP+A+L DK+G + ++LLGA+   +G WI ++
Sbjct: 191 WTSMIYMLTYILFFIPAAWLLDKWGLRLSVLLGALGNCVGAWIKLL 236


>U12965-9|AAA20605.3|  522|Caenorhabditis elegans Hypothetical
           protein F23F12.3 protein.
          Length = 522

 Score = 30.7 bits (66), Expect = 0.92
 Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
 Frame = +1

Query: 436 PSPTLLYLESEESSIPTTAYQGSWIVSIMILCSALTPIPSAYLADKFGXKTTLLLG-AIP 612
           P+P    ++  +    T AY  +WI +I  + + +  +   +L D FG K    +G +I 
Sbjct: 75  PAPFHSMVQDFKMFCGTKAYDSAWIATIQFIGALVGALVYGHLGDHFGRKPVSFVGISIG 134

Query: 613 FIIG 624
            I G
Sbjct: 135 IIFG 138


>AC025726-24|AAK73926.2|  447|Caenorhabditis elegans Hypothetical
           protein Y71G12B.25 protein.
          Length = 447

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 16/59 (27%), Positives = 29/59 (49%)
 Frame = +1

Query: 433 WPSPTLLYLESEESSIPTTAYQGSWIVSIMILCSALTPIPSAYLADKFGXKTTLLLGAI 609
           W +  L +L+ +   + T    G +I +   LC+A   + +  LAD  G ++  LL A+
Sbjct: 26  WTTTLLSFLQWDTEEVMTITDLG-YIQAFGSLCNAFGALAAGQLADTLGAQSMFLLSAV 83


>Z93391-2|CAB07681.1|  490|Caenorhabditis elegans Hypothetical
           protein W04G5.4 protein.
          Length = 490

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = +3

Query: 312 NVNIFILXXQNGSK-NSFTLEGIWNSIMCDPHY 407
           ++ IF    +NGS   SF++E  WN +   PH+
Sbjct: 193 DIKIFKTEMKNGSNVESFSVEFYWNPLSHQPHF 225


>Z83232-1|CAB05755.3| 1764|Caenorhabditis elegans Hypothetical protein
            K04B12.1 protein.
          Length = 1764

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +3

Query: 378  WNSI-MCDPHYCNSRYLLRLAVSYSTVS*IRRKFNTNNCLPRIMDSLNNDTLLGS 539
            W+S+  C P Y +S+Y      S  T++  ++  N +N LP+ +  +    LL S
Sbjct: 1492 WSSLDRCSPIYSSSKYYHLTNPSSGTMTFKKKSSNDSNLLPKSIPEVYLTRLLTS 1546


>AL021497-3|CAA16405.1|  613|Caenorhabditis elegans Hypothetical
           protein Y51A2D.5 protein.
          Length = 613

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 9/44 (20%), Positives = 20/44 (45%)
 Frame = +1

Query: 505 WIVSIMILCSALTPIPSAYLADKFGXKTTLLLGAIPFIIGWILV 636
           WI  I+ +C+ + P    +  +K G +   L      ++  +L+
Sbjct: 320 WISVILSICNLIGPFAPMFFIEKLGRRKLFLFSCAGVVVSLVLI 363


>AB162421-1|BAD36749.1| 1766|Caenorhabditis elegans plexin protein.
          Length = 1766

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +3

Query: 378  WNSI-MCDPHYCNSRYLLRLAVSYSTVS*IRRKFNTNNCLPRIMDSLNNDTLLGS 539
            W+S+  C P Y +S+Y      S  T++  ++  N +N LP+ +  +    LL S
Sbjct: 1494 WSSLDRCSPIYSSSKYYHLTNPSSGTMTFKKKSSNDSNLLPKSIPEVYLTRLLTS 1548


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,578,516
Number of Sequences: 27780
Number of extensions: 200424
Number of successful extensions: 476
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 476
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)