Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25l03
         (729 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   1.3  
AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    22   5.2  
AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced prot...    22   5.2  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   5.2  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   5.2  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   5.2  
DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholi...    21   9.0  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   9.0  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -2

Query: 419 DHQVHMHIHGYQSQAPHPHLH 357
           D ++   ++G QSQ PH  LH
Sbjct: 795 DKRLSKSVNGDQSQPPHQQLH 815


>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 10/44 (22%), Positives = 19/44 (43%)
 Frame = +2

Query: 593 QTVIQNAANSPCGQCIVQLCKAWGINTFNIVANHYKYKVVKDYL 724
           +  +   ANS  G+C+++     G+    I     K K + + L
Sbjct: 8   EVALVTGANSGIGKCLIECLVGKGMKVIGIAPQVDKMKTLVEEL 51


>AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 87

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 14/36 (38%), Positives = 15/36 (41%)
 Frame = -3

Query: 454 PCTK*S*CKHYTITRFTCTYMATNLKHLTHTFISRD 347
           PCTK   C    I R  C Y    LK      +SRD
Sbjct: 54  PCTKNQQCSILRINRNRCQY--CRLKKCIAVGMSRD 87


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 14/36 (38%), Positives = 15/36 (41%)
 Frame = -3

Query: 454 PCTK*S*CKHYTITRFTCTYMATNLKHLTHTFISRD 347
           PCTK   C    I R  C Y    LK      +SRD
Sbjct: 103 PCTKNQQCSILRINRNRCQY--CRLKKCIAVGMSRD 136


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -1

Query: 285 TGAASMRTNTSWLPSGGTWHSL 220
           T A   +TN +WLP    + SL
Sbjct: 432 TSAGFSQTNKTWLPVNENYKSL 453


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 10/38 (26%), Positives = 17/38 (44%)
 Frame = -2

Query: 464 HNTSMYQVILM*ALHDHQVHMHIHGYQSQAPHPHLHLP 351
           H++ +   +   A H   V+    G+   + HPH H P
Sbjct: 286 HHSHLSSALGRSACHSPGVYPSTAGFLPPSYHPHQHHP 323



 Score = 21.4 bits (43), Expect = 9.0
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 335 SLPSIPGDEGVGEV 376
           SLP+ P D GV +V
Sbjct: 240 SLPASPADSGVSDV 253


>DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholine
           receptor alpha3subunit protein.
          Length = 566

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +1

Query: 205 ACCKVQGMPSPTAGEPR 255
           + C++ G P+ TA  P+
Sbjct: 440 SACRIHGSPATTAAPPQ 456


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = -3

Query: 319 STLYCVYVSWINRSCQHAHQHFLAPQ 242
           ++LY  Y+ ++ R  + AHQ   +P+
Sbjct: 604 NSLYDEYIPFLERELRKAHQEKDSPR 629


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,031
Number of Sequences: 438
Number of extensions: 5107
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)