Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25k12
         (485 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z71181-6|CAA94899.1|  647|Caenorhabditis elegans Hypothetical pr...    28   4.1  
L14745-2|AAA27922.2|  461|Caenorhabditis elegans Hypothetical pr...    27   5.5  
L14745-1|AAM15540.1|  466|Caenorhabditis elegans Hypothetical pr...    27   5.5  
AL032656-1|CAA21730.1|  223|Caenorhabditis elegans Hypothetical ...    27   5.5  
AF101312-2|AAC69222.2|  475|Caenorhabditis elegans Hypothetical ...    27   5.5  
Z83220-4|CAC42264.1|  617|Caenorhabditis elegans Hypothetical pr...    27   7.2  
U41107-10|AAN39669.1|  416|Caenorhabditis elegans Hypothetical p...    27   7.2  
AF026215-5|AAB71321.2|  509|Caenorhabditis elegans Hypothetical ...    27   7.2  
Z47070-1|CAA87340.1|  516|Caenorhabditis elegans Hypothetical pr...    27   9.5  
U41107-11|AAC71161.1|  454|Caenorhabditis elegans Hypothetical p...    27   9.5  
U41107-9|AAK73877.1|  471|Caenorhabditis elegans Hypothetical pr...    27   9.5  
U41107-8|AAN39670.1|  468|Caenorhabditis elegans Hypothetical pr...    27   9.5  
AF016417-1|AAK68335.1|  241|Caenorhabditis elegans Hypothetical ...    27   9.5  

>Z71181-6|CAA94899.1|  647|Caenorhabditis elegans Hypothetical
           protein K07C5.6 protein.
          Length = 647

 Score = 27.9 bits (59), Expect = 4.1
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +2

Query: 218 FRKSGCSS*GEFAIEKRTRQARRRKQHAKIEIRNTVGHDD 337
           FRK  C + G    +KR    R RK +AK E  + +  DD
Sbjct: 110 FRKGACENCGAMGHQKRDCFDRPRKSNAK-ETNDNIAEDD 148


>L14745-2|AAA27922.2|  461|Caenorhabditis elegans Hypothetical
           protein C02F5.7a protein.
          Length = 461

 Score = 27.5 bits (58), Expect = 5.5
 Identities = 17/72 (23%), Positives = 31/72 (43%)
 Frame = -3

Query: 438 ENVFTISTFYSSVLNLTNFENAEVQLVPLQLFCQSSCPTVFRISILACCFLLRACLVRFS 259
           E++  +++ +   LN+   +N   QL    L     C  + RI +  C  + +  +VRF 
Sbjct: 373 ESIQNLASKHRETLNVLELDNCP-QLTDSTLSHLRHCKALKRIDLYDCQNVSKEAIVRFQ 431

Query: 258 IANSPYELHPLF 223
                 E+H  F
Sbjct: 432 HHRPNIEIHAYF 443


>L14745-1|AAM15540.1|  466|Caenorhabditis elegans Hypothetical
           protein C02F5.7b protein.
          Length = 466

 Score = 27.5 bits (58), Expect = 5.5
 Identities = 17/72 (23%), Positives = 31/72 (43%)
 Frame = -3

Query: 438 ENVFTISTFYSSVLNLTNFENAEVQLVPLQLFCQSSCPTVFRISILACCFLLRACLVRFS 259
           E++  +++ +   LN+   +N   QL    L     C  + RI +  C  + +  +VRF 
Sbjct: 373 ESIQNLASKHRETLNVLELDNCP-QLTDSTLSHLRHCKALKRIDLYDCQNVSKEAIVRFQ 431

Query: 258 IANSPYELHPLF 223
                 E+H  F
Sbjct: 432 HHRPNIEIHAYF 443


>AL032656-1|CAA21730.1|  223|Caenorhabditis elegans Hypothetical
           protein Y106G6E.3 protein.
          Length = 223

 Score = 27.5 bits (58), Expect = 5.5
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = +2

Query: 182 VSFEEGQWIPGCFRKSGCSS*GEFAIEKRTRQARRRKQHAKIEIR 316
           ++F+EG W     R+ G      F +   TRQAR +KQ A  E +
Sbjct: 168 LAFDEGCW-KHLSRRIGAIRAEGFEVRVTTRQAREKKQSADRETK 211


>AF101312-2|AAC69222.2|  475|Caenorhabditis elegans Hypothetical
           protein F56E10.3 protein.
          Length = 475

 Score = 27.5 bits (58), Expect = 5.5
 Identities = 10/28 (35%), Positives = 19/28 (67%)
 Frame = -3

Query: 483 FXXAWLLLYLFRYFTENVFTISTFYSSV 400
           F   +L +Y+ R F EN+++ +T Y+S+
Sbjct: 167 FIFCFLSVYISRIFQENLYSTTTTYTSI 194


>Z83220-4|CAC42264.1|  617|Caenorhabditis elegans Hypothetical
           protein C34B7.4 protein.
          Length = 617

 Score = 27.1 bits (57), Expect = 7.2
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +3

Query: 225 RAGAAHKENLRLKNELDRLEEENNMLRLKFEIL 323
           R GAA K+ L  + ++D L++      L FEIL
Sbjct: 224 RGGAARKDELEFEGDIDELKDLLAKRDLTFEIL 256


>U41107-10|AAN39669.1|  416|Caenorhabditis elegans Hypothetical
           protein F55C12.1c protein.
          Length = 416

 Score = 27.1 bits (57), Expect = 7.2
 Identities = 15/54 (27%), Positives = 29/54 (53%)
 Frame = +3

Query: 180 KYLLKKGSGFLVASGRAGAAHKENLRLKNELDRLEEENNMLRLKFEILLDMMTD 341
           KY + + + F   + R     + N+ L +E  RL+ EN++L+ +   L + +TD
Sbjct: 12  KYAMNQLNSF---TKRYSELEERNMSLSDERTRLKTENSVLKERMHNLEEQLTD 62


>AF026215-5|AAB71321.2|  509|Caenorhabditis elegans Hypothetical
           protein F09G2.3 protein.
          Length = 509

 Score = 27.1 bits (57), Expect = 7.2
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -3

Query: 471 WLLLYLFRYFTENVFTISTFYSSVLNLTN 385
           WL ++ F   T N+F IS   S VL+L+N
Sbjct: 202 WLPIFYFACLTFNMFMISYQGSKVLHLSN 230


>Z47070-1|CAA87340.1|  516|Caenorhabditis elegans Hypothetical
           protein T09B9.2 protein.
          Length = 516

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = -3

Query: 414 FYSSVLNLTNFENAEVQLVPLQLFCQSSCPTVFRISILACCFLLR 280
           F+S VL L+N  N  V  +P+ +   S C +    S L     LR
Sbjct: 300 FFSDVLGLSNTVNGLVSALPMAILFLSKCLSASLASYLTANGYLR 344


>U41107-11|AAC71161.1|  454|Caenorhabditis elegans Hypothetical
           protein F55C12.1a protein.
          Length = 454

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = +3

Query: 225 RAGAAHKENLRLKNELDRLEEENNMLRLKFEILLDMMTD 341
           R     + N+ L +E  RL+ EN++L+ +   L + +TD
Sbjct: 62  RYSELEERNMSLSDERTRLKTENSVLKERMHNLEEQLTD 100


>U41107-9|AAK73877.1|  471|Caenorhabditis elegans Hypothetical
           protein F55C12.1b protein.
          Length = 471

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = +3

Query: 225 RAGAAHKENLRLKNELDRLEEENNMLRLKFEILLDMMTD 341
           R     + N+ L +E  RL+ EN++L+ +   L + +TD
Sbjct: 79  RYSELEERNMSLSDERTRLKTENSVLKERMHNLEEQLTD 117


>U41107-8|AAN39670.1|  468|Caenorhabditis elegans Hypothetical
           protein F55C12.1d protein.
          Length = 468

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = +3

Query: 225 RAGAAHKENLRLKNELDRLEEENNMLRLKFEILLDMMTD 341
           R     + N+ L +E  RL+ EN++L+ +   L + +TD
Sbjct: 76  RYSELEERNMSLSDERTRLKTENSVLKERMHNLEEQLTD 114


>AF016417-1|AAK68335.1|  241|Caenorhabditis elegans Hypothetical
           protein F17A9.3 protein.
          Length = 241

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +3

Query: 225 RAGAAHKENLRLKNELDRLEEENNMLR 305
           RA +  +EN+ L+ ELD+L  E + LR
Sbjct: 147 RATSLERENMLLRVELDQLRAETDKLR 173


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,817,103
Number of Sequences: 27780
Number of extensions: 162110
Number of successful extensions: 562
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 562
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 903458030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)