Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25k08
         (707 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0313 + 3447065-3448204                                           31   0.68 
05_01_0172 + 1194563-1194934,1196051-1196120,1196769-1196833,119...    29   4.8  

>10_01_0313 + 3447065-3448204
          Length = 379

 Score = 31.5 bits (68), Expect = 0.68
 Identities = 15/46 (32%), Positives = 21/46 (45%)
 Frame = -3

Query: 357 CRLYHFKSIWSNFRFKFVVNFEISFTAFFIPRSIGKLISFDASFTS 220
           C+ +   +    FR +FV   E  F  FF P     + SF+A F S
Sbjct: 55  CKRWRRLAFEPGFRRRFVARHEPPFLGFFFPYDFDPVFSFNAGFRS 100


>05_01_0172 +
           1194563-1194934,1196051-1196120,1196769-1196833,
           1197608-1197958
          Length = 285

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = +2

Query: 542 LNQIEISSWLCDAQSFCFECIKDLLQCGIIHWIQ 643
           +N ++ S W  D Q+ CF+C  D  + G++  I+
Sbjct: 199 VNDVDCSKWSNDQQTLCFQC--DSCKAGVLAGIK 230


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,283,146
Number of Sequences: 37544
Number of extensions: 269583
Number of successful extensions: 587
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 587
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1827423340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)