Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25k08
         (707 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81113-2|CAB03279.1|  510|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z79757-6|CAB02127.1|  350|Caenorhabditis elegans Hypothetical pr...    29   4.3  
AF106581-5|AAC78210.1|  588|Caenorhabditis elegans Hypothetical ...    29   4.3  
U56964-7|AAB54034.1|  382|Caenorhabditis elegans Hypothetical pr...    28   5.7  
AF026215-7|ABR92608.1|  554|Caenorhabditis elegans Hypothetical ...    28   5.7  
AF026215-6|AAB71325.1|  516|Caenorhabditis elegans Hypothetical ...    28   5.7  
AC024877-2|AAF60905.2|  608|Caenorhabditis elegans Hypothetical ...    28   5.7  
Z83219-2|CAB05695.1|  377|Caenorhabditis elegans Hypothetical pr...    28   7.5  

>Z81113-2|CAB03279.1|  510|Caenorhabditis elegans Hypothetical
           protein T03F6.2 protein.
          Length = 510

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 18/34 (52%), Positives = 20/34 (58%)
 Frame = +2

Query: 185 DSVTDFFATKLSEVNEASKLINLPIERGIKKAVN 286
           DS T  FA  L E   A+ LIN P E+G KKA N
Sbjct: 464 DSRTRLFA-HLQETGHATLLINKPGEKGQKKAKN 496


>Z79757-6|CAB02127.1|  350|Caenorhabditis elegans Hypothetical
           protein F55B12.6 protein.
          Length = 350

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 14/54 (25%), Positives = 30/54 (55%)
 Frame = +2

Query: 5   F*NNSTRELNETIMAFIIIKILVLSVFINEIISFPILDLIPEQFNDYVTTQFII 166
           F  N  ++L + +    +I IL++ + +   ++ P L+L  E+F+ +VT  + I
Sbjct: 256 FTKNLQKQLLKALFLQALIPILLMYLPVGTYMTLPALNLDSEEFSKFVTLLYAI 309


>AF106581-5|AAC78210.1|  588|Caenorhabditis elegans Hypothetical
           protein VC5.2 protein.
          Length = 588

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 17/55 (30%), Positives = 33/55 (60%)
 Frame = +2

Query: 128 EQFNDYVTTQFIITITDLKDSVTDFFATKLSEVNEASKLINLPIERGIKKAVNDI 292
           EQFND+V ++ + T  DL D + +    +L  + E +K  ++ +E+GI + ++ I
Sbjct: 96  EQFNDFVKSESLTTKNDLGDLLDNEQIYQLHMLLEKTKRPDI-VEKGILQHLHGI 149


>U56964-7|AAB54034.1|  382|Caenorhabditis elegans Hypothetical
           protein F52E4.8 protein.
          Length = 382

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 18/55 (32%), Positives = 31/55 (56%)
 Frame = -3

Query: 264 RSIGKLISFDASFTSLNFVAKKSVTLSFRSVIVIINCVVT*SLNCSGIKSSIGKE 100
           R+I  + +F  SF     +   S+T+SF SV +  N ++  SL+C+ I S + +E
Sbjct: 305 RAILLIENFQLSFFYGQSIRFNSITISFASVKIKPNKIIFASLHCN-INSGVHRE 358


>AF026215-7|ABR92608.1|  554|Caenorhabditis elegans Hypothetical
           protein F09G2.8b protein.
          Length = 554

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
 Frame = -1

Query: 665 KNITVGAIVSNGLFHTEVNL*YIQNKMIAHRTANWKFQFDLKMIQVMI---TCILSDVH 498
           + I V  ++ +G+ HT+  L  I    I     +WK   ++K + V+     C+ SD++
Sbjct: 263 REINVTRLIGSGIIHTKFILSDIATLYIGSANMDWKSLSEVKEVGVVFQECPCVASDLY 321


>AF026215-6|AAB71325.1|  516|Caenorhabditis elegans Hypothetical
           protein F09G2.8 protein.
          Length = 516

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
 Frame = -1

Query: 665 KNITVGAIVSNGLFHTEVNL*YIQNKMIAHRTANWKFQFDLKMIQVMI---TCILSDVH 498
           + I V  ++ +G+ HT+  L  I    I     +WK   ++K + V+     C+ SD++
Sbjct: 225 REINVTRLIGSGIIHTKFILSDIATLYIGSANMDWKSLSEVKEVGVVFQECPCVASDLY 283


>AC024877-2|AAF60905.2|  608|Caenorhabditis elegans Hypothetical
           protein Y95B8A.7 protein.
          Length = 608

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 11/31 (35%), Positives = 21/31 (67%)
 Frame = +2

Query: 215 LSEVNEASKLINLPIERGIKKAVNDISKLTT 307
           +S++NE+ K ++  IER ++K   D+ +L T
Sbjct: 284 ISDINESLKYVSDKIERDVRKIPEDVVELPT 314


>Z83219-2|CAB05695.1|  377|Caenorhabditis elegans Hypothetical
           protein C31C9.3 protein.
          Length = 377

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 12/49 (24%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = -2

Query: 520 LVFCQTFIMASDSPC-RNTVSNYISSSTETKFVDIPYHLIILLFCHNDY 377
           L F    ++ + SPC R+   ++++  T      IP H+ +  +  +DY
Sbjct: 89  LNFLDRLLLRNVSPCFRSIAEDHVNEVTNISVTSIPNHVHVCFYHESDY 137


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,673,035
Number of Sequences: 27780
Number of extensions: 291408
Number of successful extensions: 744
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 744
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)