Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte25k03
(627 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL136924-1|CAB66858.1| 861|Homo sapiens hypothetical protein pr... 32 1.4
AL132821-2|CAI23572.1| 944|Homo sapiens Ras and Rab interactor ... 32 1.4
AL049538-1|CAI19340.1| 944|Homo sapiens Ras and Rab interactor ... 32 1.4
AB060339-1|BAB84317.1| 895|Homo sapiens RIN2 protein. 32 1.4
BC030224-1|AAH30224.1| 169|Homo sapiens CD48 protein protein. 31 2.5
AL121985-4|CAH73506.1| 169|Homo sapiens CD48 molecule protein. 31 2.5
AY396741-1|AAR91619.1| 2850|Homo sapiens hornerin precursor prot... 31 3.3
AL589986-3|CAH70026.1| 2850|Homo sapiens hornerin protein. 31 3.3
AF488691-1|AAN45858.1| 1004|Homo sapiens friend of GATA-1 protein. 31 4.4
BC132847-1|AAI32848.1| 181|Homo sapiens Unknown (protein for MG... 30 7.7
BC132843-1|AAI32844.1| 181|Homo sapiens Unknown (protein for MG... 30 7.7
AK126064-1|BAC86421.1| 181|Homo sapiens protein ( Homo sapiens ... 30 7.7
AK124700-1|BAC85929.1| 333|Homo sapiens protein ( Homo sapiens ... 30 7.7
>AL136924-1|CAB66858.1| 861|Homo sapiens hypothetical protein
protein.
Length = 861
Score = 32.3 bits (70), Expect = 1.4
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +1
Query: 274 SLSKIWLRNQKHQNSIRTPKRSRCERSGKRLTIVGPFGLKDGAGYWTKGNKR*RRRTPS 450
SL ++ L N H RTP C ++ L + P LK + + G KR RTP+
Sbjct: 205 SLRQLCLINGVHSIKTRTPSELECSQTNGALCFINPLFLKVHSQDLSGGLKRPSTRTPN 263
>AL132821-2|CAI23572.1| 944|Homo sapiens Ras and Rab interactor 2
protein.
Length = 944
Score = 32.3 bits (70), Expect = 1.4
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +1
Query: 274 SLSKIWLRNQKHQNSIRTPKRSRCERSGKRLTIVGPFGLKDGAGYWTKGNKR*RRRTPS 450
SL ++ L N H RTP C ++ L + P LK + + G KR RTP+
Sbjct: 288 SLRQLCLINGVHSIKTRTPSELECSQTNGALCFINPLFLKVHSQDLSGGLKRPSTRTPN 346
>AL049538-1|CAI19340.1| 944|Homo sapiens Ras and Rab interactor 2
protein.
Length = 944
Score = 32.3 bits (70), Expect = 1.4
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +1
Query: 274 SLSKIWLRNQKHQNSIRTPKRSRCERSGKRLTIVGPFGLKDGAGYWTKGNKR*RRRTPS 450
SL ++ L N H RTP C ++ L + P LK + + G KR RTP+
Sbjct: 288 SLRQLCLINGVHSIKTRTPSELECSQTNGALCFINPLFLKVHSQDLSGGLKRPSTRTPN 346
>AB060339-1|BAB84317.1| 895|Homo sapiens RIN2 protein.
Length = 895
Score = 32.3 bits (70), Expect = 1.4
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +1
Query: 274 SLSKIWLRNQKHQNSIRTPKRSRCERSGKRLTIVGPFGLKDGAGYWTKGNKR*RRRTPS 450
SL ++ L N H RTP C ++ L + P LK + + G KR RTP+
Sbjct: 239 SLRQLCLINGVHSIKTRTPSELECSQTNGALCFINPLFLKVHSQDLSGGLKRPSTRTPN 297
>BC030224-1|AAH30224.1| 169|Homo sapiens CD48 protein protein.
Length = 169
Score = 31.5 bits (68), Expect = 2.5
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 351 QWKKVDNCRALWFERWSWLLDERKQT 428
QW ++D+CRA W E W L +E ++T
Sbjct: 141 QWPQMDHCRASW-EAWGTLGEEERKT 165
>AL121985-4|CAH73506.1| 169|Homo sapiens CD48 molecule protein.
Length = 169
Score = 31.5 bits (68), Expect = 2.5
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 351 QWKKVDNCRALWFERWSWLLDERKQT 428
QW ++D+CRA W E W L +E ++T
Sbjct: 141 QWPQMDHCRASW-EAWGTLGEEERKT 165
>AY396741-1|AAR91619.1| 2850|Homo sapiens hornerin precursor
protein.
Length = 2850
Score = 31.1 bits (67), Expect = 3.3
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 434 GGGRHPSRGRFDPGAGQRDG-NHQGTQAGPRHDYRTH 541
G GR SRG ++ G+G G HQ +++G Y H
Sbjct: 564 GSGRSSSRGPYESGSGHSSGLGHQESRSGQSSGYGQH 600
Score = 30.3 bits (65), Expect = 5.8
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = +2
Query: 431 SGGGRHPSRGRFDPGAGQRDG-NHQGTQAGPRHDYRTH 541
SG GR S G+ PG G+ G H + +G Y H
Sbjct: 2086 SGSGRSSSSGQHGPGLGESSGFGHHESSSGQSSSYSQH 2123
>AL589986-3|CAH70026.1| 2850|Homo sapiens hornerin protein.
Length = 2850
Score = 31.1 bits (67), Expect = 3.3
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 434 GGGRHPSRGRFDPGAGQRDG-NHQGTQAGPRHDYRTH 541
G GR SRG ++ G+G G HQ +++G Y H
Sbjct: 564 GSGRSSSRGPYESGSGHSSGLGHQESRSGQSSGYGQH 600
Score = 30.3 bits (65), Expect = 5.8
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = +2
Query: 431 SGGGRHPSRGRFDPGAGQRDG-NHQGTQAGPRHDYRTH 541
SG GR S G+ PG G+ G H + +G Y H
Sbjct: 2086 SGSGRSSSSGQHGPGLGESSGFGHHESSSGQSSSYSQH 2123
>AF488691-1|AAN45858.1| 1004|Homo sapiens friend of GATA-1 protein.
Length = 1004
Score = 30.7 bits (66), Expect = 4.4
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = -1
Query: 522 RGPA*VPWWFPSL*PAPGSKRPRDGWRPPP 433
RGP+ P P+ P PGS+ PRDG P P
Sbjct: 896 RGPSPAP--APAASPQPGSRGPRDGLGPEP 923
>BC132847-1|AAI32848.1| 181|Homo sapiens Unknown (protein for
MGC:164478) protein.
Length = 181
Score = 29.9 bits (64), Expect = 7.7
Identities = 11/25 (44%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = -1
Query: 504 PWWFPSL*PAPGSKRPR-DGWRPPP 433
PWWFP G + R + W PPP
Sbjct: 143 PWWFPHAVKPVGMQSARVEAWEPPP 167
>BC132843-1|AAI32844.1| 181|Homo sapiens Unknown (protein for
MGC:164474) protein.
Length = 181
Score = 29.9 bits (64), Expect = 7.7
Identities = 11/25 (44%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = -1
Query: 504 PWWFPSL*PAPGSKRPR-DGWRPPP 433
PWWFP G + R + W PPP
Sbjct: 143 PWWFPHAVKPVGMQSARVEAWEPPP 167
>AK126064-1|BAC86421.1| 181|Homo sapiens protein ( Homo sapiens
cDNA FLJ44076 fis, clone TESTI4038492. ).
Length = 181
Score = 29.9 bits (64), Expect = 7.7
Identities = 11/25 (44%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = -1
Query: 504 PWWFPSL*PAPGSKRPR-DGWRPPP 433
PWWFP G + R + W PPP
Sbjct: 143 PWWFPHAVKPVGMQSARVEAWEPPP 167
>AK124700-1|BAC85929.1| 333|Homo sapiens protein ( Homo sapiens
cDNA FLJ42710 fis, clone BRAMY3007609, moderately
similar to Homo sapiens nuclear RNA export factor 2
(NXF2). ).
Length = 333
Score = 29.9 bits (64), Expect = 7.7
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +2
Query: 38 VFGIIHRPVFLSGDNILLLFRSSQ*FV*NKREYFYKLFCIDNFSLAGFVL 187
V G+ ++L G+++ F +V REYF KL C+D LA ++
Sbjct: 145 VKGLKLEELWLEGNSLCSTFSDQSAYVSIIREYFPKLLCLDGQELASPII 194
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,315,408
Number of Sequences: 237096
Number of extensions: 2077474
Number of successful extensions: 5442
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4983
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5433
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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