Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25j19
         (330 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_07_0345 - 29417029-29417769                                         27   4.7  
10_08_0608 + 19184722-19185224,19185331-19185410,19186048-191862...    26   6.2  
03_06_0659 - 35345095-35345135,35345982-35347365                       26   6.2  
07_03_0305 - 16475127-16476017,16476058-16478067                       26   8.3  
06_02_0268 + 13597921-13598373                                         26   8.3  
06_01_1106 + 9111560-9112942                                           26   8.3  
05_04_0182 - 18814642-18815175,18815180-18815195,18815468-188155...    26   8.3  
01_06_0414 + 29182350-29183812,29184211-29184346                       26   8.3  

>05_07_0345 - 29417029-29417769
          Length = 246

 Score = 26.6 bits (56), Expect = 4.7
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = +1

Query: 1   DNPNQGSYQTGQGFTGKPLNEKYEEPEPTGPPRGF 105
           D+ N  +Y  G+G  G    E  E   P GP + F
Sbjct: 65  DSNNNNNYDEGEGEGGDDQEEGPEAAAPVGPGQSF 99


>10_08_0608 + 19184722-19185224,19185331-19185410,19186048-19186235,
            19187021-19187927,19188015-19188142,19189270-19189356,
            19189422-19189472,19189582-19189668,19189746-19189873,
            19190469-19190608,19190721-19190882,19190964-19192733,
            19192807-19192922,19193077-19193227,19193243-19193371,
            19193598-19194139
          Length = 1722

 Score = 26.2 bits (55), Expect = 6.2
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -1

Query: 171  CRSSLQITLQDDTGDWVGETVEEAPW 94
            C + + ++  D+T D+ GE V+ A W
Sbjct: 1362 CSTPIALSPWDETSDYQGEAVDSALW 1387


>03_06_0659 - 35345095-35345135,35345982-35347365
          Length = 474

 Score = 26.2 bits (55), Expect = 6.2
 Identities = 13/40 (32%), Positives = 17/40 (42%)
 Frame = +1

Query: 67  YEEPEPTGPPRGFFYSFTYPVSSIVLKSDLQGGSAPTRYP 186
           + E   TGP     +   +P  S V + DL G   P  YP
Sbjct: 326 FNEDLKTGPATERHWGLFHPNGSAVYEVDLTGRRPPASYP 365


>07_03_0305 - 16475127-16476017,16476058-16478067
          Length = 966

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 14/55 (25%), Positives = 30/55 (54%)
 Frame = -1

Query: 174 WCRSSLQITLQDDTGDWVGETVEEAPWWTGWFGLFVFFI*RLSGESLTGLVASLV 10
           W RS   IT+ D +   + +++ +  W T  F    +F+  LSG  ++G++ +++
Sbjct: 456 WLRSQDTITMMDISNTSIADSIPDWFWTT--FSNTRYFV--LSGNQISGVLPAMM 506


>06_02_0268 + 13597921-13598373
          Length = 150

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -1

Query: 222 IVATDGNGVFVGWISSWCRSSLQITLQDDTGD 127
           I+A + + VF+G I  W R +   T   +T D
Sbjct: 45  IIALEFSAVFLGLIQLWLRDAYSRTAASNTND 76


>06_01_1106 + 9111560-9112942
          Length = 460

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +1

Query: 31  GQGFTGKPLNEKYEEPEPTGP 93
           G   T   LN   +EPEPTGP
Sbjct: 169 GLRLTRADLNPPIDEPEPTGP 189


>05_04_0182 -
           18814642-18815175,18815180-18815195,18815468-18815557,
           18815838-18815902
          Length = 234

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +1

Query: 154 LQGGSAPTRYPADKDTISVGG 216
           L+ G+AP R+PA+  T   GG
Sbjct: 172 LEAGAAPGRHPAETATFDEGG 192


>01_06_0414 + 29182350-29183812,29184211-29184346
          Length = 532

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = -1

Query: 279 FQNHLSLVSVMSSSNGFLRIVATDGNGVFVGWISS 175
           F  +L    ++++S G   I++  G G+   W+SS
Sbjct: 286 FDVNLQTAGLIAASFGMANIISRPGGGLLSDWLSS 320


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,846,198
Number of Sequences: 37544
Number of extensions: 192277
Number of successful extensions: 517
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 517
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 447336660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)