Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte25j19
(330 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y08766-1|CAA70019.1| 638|Homo sapiens SF1-Bo isoform protein. 32 0.49
L49345-1|AAB03514.1| 571|Homo sapiens transcription factor ZFM1... 32 0.49
AY157990-1|AAN76325.1| 1778|Homo sapiens myeloid/lymphoid or mix... 30 2.0
AY147037-1|AAN17675.1| 1858|Homo sapiens MLL5 protein. 30 2.0
AF519459-1|AAM74947.1| 1858|Homo sapiens MLL5 protein. 30 2.0
X81411-1|CAA57168.1| 357|Homo sapiens 5-HT5A serotonin receptor... 29 4.6
BC113468-1|AAI13469.1| 357|Homo sapiens 5-hydroxytryptamine (se... 29 4.6
BC112021-1|AAI12022.1| 357|Homo sapiens 5-hydroxytryptamine (se... 29 4.6
AK131302-1|BAD18470.1| 626|Homo sapiens protein ( Homo sapiens ... 29 4.6
AF498985-1|AAM21132.1| 357|Homo sapiens 5-hydroxytryptamine rec... 29 4.6
AC093726-2|AAP21864.1| 247|Homo sapiens unknown protein. 29 4.6
>Y08766-1|CAA70019.1| 638|Homo sapiens SF1-Bo isoform protein.
Length = 638
Score = 31.9 bits (69), Expect = 0.49
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -1
Query: 120 GETVEEAPWWTGWFG 76
G ++ PWWTGWFG
Sbjct: 621 GRQPQQRPWWTGWFG 635
>L49345-1|AAB03514.1| 571|Homo sapiens transcription factor ZFM1
protein.
Length = 571
Score = 31.9 bits (69), Expect = 0.49
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -1
Query: 120 GETVEEAPWWTGWFG 76
G ++ PWWTGWFG
Sbjct: 554 GRQPQQRPWWTGWFG 568
>AY157990-1|AAN76325.1| 1778|Homo sapiens myeloid/lymphoid or
mixed-lineage leukemia 5 protein.
Length = 1778
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/83 (25%), Positives = 32/83 (38%)
Frame = +1
Query: 7 PNQGSYQTGQGFTGKPLNEKYEEPEPTGPPRGFFYSFTYPVSSIVLKSDLQGGSAPTRYP 186
P+ S T F + LN P P PP +Y P ++ + L+G +
Sbjct: 1443 PSGQSSATYSQFNQQSLNSTAPPPPPPPPPSSSYYQNQQPSANFQNYNQLKGSLSQQTVF 1502
Query: 187 ADKDTISVGGYNS*ETV*GRHDT 255
++ G S +TV G H T
Sbjct: 1503 TSGPNQALPGTTSQQTVPGHHVT 1525
>AY147037-1|AAN17675.1| 1858|Homo sapiens MLL5 protein.
Length = 1858
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/83 (25%), Positives = 32/83 (38%)
Frame = +1
Query: 7 PNQGSYQTGQGFTGKPLNEKYEEPEPTGPPRGFFYSFTYPVSSIVLKSDLQGGSAPTRYP 186
P+ S T F + LN P P PP +Y P ++ + L+G +
Sbjct: 1523 PSGQSSATYSQFNQQSLNSTAPPPPPPPPPSSSYYQNQQPSANFQNYNQLKGSLSQQTVF 1582
Query: 187 ADKDTISVGGYNS*ETV*GRHDT 255
++ G S +TV G H T
Sbjct: 1583 TSGPNQALPGTTSQQTVPGHHVT 1605
>AF519459-1|AAM74947.1| 1858|Homo sapiens MLL5 protein.
Length = 1858
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/83 (25%), Positives = 32/83 (38%)
Frame = +1
Query: 7 PNQGSYQTGQGFTGKPLNEKYEEPEPTGPPRGFFYSFTYPVSSIVLKSDLQGGSAPTRYP 186
P+ S T F + LN P P PP +Y P ++ + L+G +
Sbjct: 1523 PSGQSSATYSQFNQQSLNSTAPPPPPPPPPSSSYYQNQQPSANFQNYNQLKGSLSQQTVF 1582
Query: 187 ADKDTISVGGYNS*ETV*GRHDT 255
++ G S +TV G H T
Sbjct: 1583 TSGPNQALPGTTSQQTVPGHHVT 1605
>X81411-1|CAA57168.1| 357|Homo sapiens 5-HT5A serotonin receptor
protein.
Length = 357
Score = 28.7 bits (61), Expect = 4.6
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = -3
Query: 175 LVPILLADHSSGRYWRLGR*NCRRSPVVDRLVRALRIFHLEAFR*ILDRFGS 20
++P+ L SGR W+LGR C+ D L I+++ A LDR+ S
Sbjct: 93 VMPLSLVHELSGRRWQLGRRLCQLWIACDVLCCTASIWNVTAI--ALDRYWS 142
>BC113468-1|AAI13469.1| 357|Homo sapiens 5-hydroxytryptamine
(serotonin) receptor 5A protein.
Length = 357
Score = 28.7 bits (61), Expect = 4.6
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = -3
Query: 175 LVPILLADHSSGRYWRLGR*NCRRSPVVDRLVRALRIFHLEAFR*ILDRFGS 20
++P+ L SGR W+LGR C+ D L I+++ A LDR+ S
Sbjct: 93 VMPLSLVHELSGRRWQLGRRLCQLWIACDVLCCTASIWNVTAI--ALDRYWS 142
>BC112021-1|AAI12022.1| 357|Homo sapiens 5-hydroxytryptamine
(serotonin) receptor 5A protein.
Length = 357
Score = 28.7 bits (61), Expect = 4.6
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = -3
Query: 175 LVPILLADHSSGRYWRLGR*NCRRSPVVDRLVRALRIFHLEAFR*ILDRFGS 20
++P+ L SGR W+LGR C+ D L I+++ A LDR+ S
Sbjct: 93 VMPLSLVHELSGRRWQLGRRLCQLWIACDVLCCTASIWNVTAI--ALDRYWS 142
>AK131302-1|BAD18470.1| 626|Homo sapiens protein ( Homo sapiens
cDNA FLJ16275 fis, clone NT2RI2027157, moderately
similar to Mouse SDR2 mRNA. ).
Length = 626
Score = 28.7 bits (61), Expect = 4.6
Identities = 19/61 (31%), Positives = 27/61 (44%)
Frame = +1
Query: 28 TGQGFTGKPLNEKYEEPEPTGPPRGFFYSFTYPVSSIVLKSDLQGGSAPTRYPADKDTIS 207
+G F G L + E + GPP G F VS ++ D+QG + R + K I
Sbjct: 69 SGHPFKGFLLEARNAE-DLNGPPIGSFTLIDSEVSQLLTCEDIQGSAVSHRSASKKTEIK 127
Query: 208 V 210
V
Sbjct: 128 V 128
>AF498985-1|AAM21132.1| 357|Homo sapiens 5-hydroxytryptamine
receptor 5A protein.
Length = 357
Score = 28.7 bits (61), Expect = 4.6
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = -3
Query: 175 LVPILLADHSSGRYWRLGR*NCRRSPVVDRLVRALRIFHLEAFR*ILDRFGS 20
++P+ L SGR W+LGR C+ D L I+++ A LDR+ S
Sbjct: 93 VMPLSLVHELSGRRWQLGRRLCQLWIACDVLCCTASIWNVTAI--ALDRYWS 142
>AC093726-2|AAP21864.1| 247|Homo sapiens unknown protein.
Length = 247
Score = 28.7 bits (61), Expect = 4.6
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = -3
Query: 175 LVPILLADHSSGRYWRLGR*NCRRSPVVDRLVRALRIFHLEAFR*ILDRFGS 20
++P+ L SGR W+LGR C+ D L I+++ A LDR+ S
Sbjct: 93 VMPLSLVHELSGRRWQLGRRLCQLWIACDVLCCTASIWNVTAI--ALDRYWS 142
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,274,222
Number of Sequences: 237096
Number of extensions: 1015161
Number of successful extensions: 2561
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2561
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1743854340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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