Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25j17
         (718 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80954-5|AAB38096.1|  822|Caenorhabditis elegans Hypothetical pr...    30   1.9  
U40160-1|AAA81155.3|  531|Caenorhabditis elegans Hypothetical pr...    29   2.5  
U50300-1|AAC48108.2|  349|Caenorhabditis elegans Serpentine rece...    29   4.4  
CU457740-2|CAM36332.1|  301|Caenorhabditis elegans Hypothetical ...    29   4.4  
Z81464-7|CAB03857.2|  338|Caenorhabditis elegans Hypothetical pr...    28   7.7  
AL110478-4|CAB54346.1|  546|Caenorhabditis elegans Hypothetical ...    28   7.7  

>U80954-5|AAB38096.1|  822|Caenorhabditis elegans Hypothetical protein
            T07F8.1 protein.
          Length = 822

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 32/130 (24%), Positives = 56/130 (43%), Gaps = 17/130 (13%)
 Frame = +1

Query: 346  GPQIRSLMADEEFDATMNNTESDAWLA-FRDVVNNFLG-----NNKH------PDYKNKV 489
            G Q+R L+  E  D  +      +W+   R+ +N+        NN         D+   +
Sbjct: 676  GNQVRQLLRTENIDKVLKVFTDCSWIQNMRNFMNDLASLMSASNNAVFTDDDLNDFAKTL 735

Query: 490  ANLLDKYQKLGCNMSI--KLHFLDSHVDFF--PDNLGDYSKEQG-ERFHQDIKTMETRYQ 654
             NL    + L  +M +  KLH L +H++ +         + EQG E FH   +T ETR+ 
Sbjct: 736  KNLKRNIRILHPSMGVTPKLHILCTHLEPYIRAKRTWGRTSEQGMEAFHVLFRTTETRFS 795

Query: 655  GRWNVNMMAD 684
               ++ + A+
Sbjct: 796  SVMSLKLRAE 805


>U40160-1|AAA81155.3|  531|Caenorhabditis elegans Hypothetical
           protein C56E10.3 protein.
          Length = 531

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 17/58 (29%), Positives = 27/58 (46%)
 Frame = +1

Query: 256 KALDKNNATFEYLCKKIPRLSDAKIKGVFDGPQIRSLMADEEFDATMNNTESDAWLAF 429
           K LDK    +E LCKK  +L   K +   +  Q+ +    +E D +    E +A  +F
Sbjct: 43  KQLDKKCGEYEQLCKKTAKLKAEKSRLDVESTQLTA--QSDEIDQSFTKVEQNAEASF 98


>U50300-1|AAC48108.2|  349|Caenorhabditis elegans Serpentine
           receptor, class x protein3 protein.
          Length = 349

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 18/56 (32%), Positives = 28/56 (50%)
 Frame = -3

Query: 257 LTNCFIIPSLI*SGGSKIFSGLIKFFCNVFCFYFEIFTRIPLFLNVVLVSCYTVPH 90
           +T+ F++ +   S  + +F     FF     +YFE FT+I + LN  LV C    H
Sbjct: 70  ITSSFLVSTEKKSKWTLVFGSAFLFF-----WYFETFTQIVMALNRYLVICLQKHH 120


>CU457740-2|CAM36332.1|  301|Caenorhabditis elegans Hypothetical
           protein C50E10.2 protein.
          Length = 301

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = +1

Query: 217 PLHIKLGMMKQFVKALDKNNATFEYLCKKIPRLSDAKIKGV 339
           P  + + + +Q  + L KN+   EY+C  +    DAK   V
Sbjct: 188 PYILTISLKRQLFEELKKNHGDLEYVCNMLIVAEDAKFPNV 228


>Z81464-7|CAB03857.2|  338|Caenorhabditis elegans Hypothetical
           protein C08E8.2 protein.
          Length = 338

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
 Frame = +1

Query: 145 VKISK*KQKTLQKNLISPEKILLPP-----LHIKLGMMKQFVKALDKNNATFEYLCKKIP 309
           +KIS    K L KNL  P  I L P     +  +  M +  +K LD      +  C+ +P
Sbjct: 166 LKISTGTVKVLAKNLYFPNGIQLTPDKKSAIFAECSMAR--IKKLDLETGKIDIFCENLP 223

Query: 310 RLSDAKIKG 336
            L D  I+G
Sbjct: 224 GLPD-NIRG 231


>AL110478-4|CAB54346.1|  546|Caenorhabditis elegans Hypothetical
           protein Y26D4A.10 protein.
          Length = 546

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = +1

Query: 490 ANLLDKYQKLGCNMSIKLHFLDSHVDFFPDNLGDYSKEQGE 612
           A++L+K  +   +   K+H  D H +F   N  DY  E  +
Sbjct: 491 ADILEKRARALEDQKCKIHPTDDHTNFSRSNFSDYPNEYAD 531


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,403,706
Number of Sequences: 27780
Number of extensions: 359029
Number of successful extensions: 1208
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1208
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)