Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte25j09
(574 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99281-37|CAJ44244.1| 740|Caenorhabditis elegans Hypothetical p... 29 1.8
Z99281-34|CAJ44243.1| 917|Caenorhabditis elegans Hypothetical p... 29 1.8
AY611485-1|AAT37524.1| 740|Caenorhabditis elegans epidermal gro... 29 1.8
AY611484-1|AAT37523.1| 917|Caenorhabditis elegans epidermal gro... 29 1.8
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ... 29 2.3
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z69792-1|CAB61002.1| 605|Caenorhabditis elegans Hypothetical pr... 28 5.4
D85744-1|BAA12861.1| 605|Caenorhabditis elegans HCH-1 protein. 28 5.4
Z77662-16|CAJ90504.1| 424|Caenorhabditis elegans Hypothetical p... 27 7.2
AL033512-5|CAA22073.2| 424|Caenorhabditis elegans Hypothetical ... 27 7.2
Z69788-8|CAA93644.3| 483|Caenorhabditis elegans Hypothetical pr... 27 9.5
AF000191-1|AAB52884.1| 533|Caenorhabditis elegans Hypothetical ... 27 9.5
>Z99281-37|CAJ44244.1| 740|Caenorhabditis elegans Hypothetical
protein Y57G11C.24h protein.
Length = 740
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +3
Query: 177 YNKRPRCGQPRPQPHQRETTAYCGGPSNVPLEKP 278
YN+ GQP P P + +A P VP+ +P
Sbjct: 26 YNRSTPGGQPAPSPSHSQQSASSHHPRGVPMSQP 59
>Z99281-34|CAJ44243.1| 917|Caenorhabditis elegans Hypothetical
protein Y57G11C.24g protein.
Length = 917
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +3
Query: 177 YNKRPRCGQPRPQPHQRETTAYCGGPSNVPLEKP 278
YN+ GQP P P + +A P VP+ +P
Sbjct: 26 YNRSTPGGQPAPSPSHSQQSASSHHPRGVPMSQP 59
>AY611485-1|AAT37524.1| 740|Caenorhabditis elegans epidermal growth
factor receptorpathway substrate 8 splice variant B
protein.
Length = 740
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +3
Query: 177 YNKRPRCGQPRPQPHQRETTAYCGGPSNVPLEKP 278
YN+ GQP P P + +A P VP+ +P
Sbjct: 26 YNRSTPGGQPAPSPSHSQQSASSHHPRGVPMSQP 59
>AY611484-1|AAT37523.1| 917|Caenorhabditis elegans epidermal growth
factor receptorpathway substrate 8 splice variant A
protein.
Length = 917
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +3
Query: 177 YNKRPRCGQPRPQPHQRETTAYCGGPSNVPLEKP 278
YN+ GQP P P + +A P VP+ +P
Sbjct: 26 YNRSTPGGQPAPSPSHSQQSASSHHPRGVPMSQP 59
>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
protein F21E9.1 protein.
Length = 1170
Score = 29.1 bits (62), Expect = 2.3
Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 7/77 (9%)
Frame = +3
Query: 102 SVLPRGIENCRPIARYGYVTAE---SSIYNKRPRCGQPRPQPHQRETT----AYCGGPSN 260
+VL + N + + + T++ S+ + R R PHQ ++ Y N
Sbjct: 109 AVLKSAVRNTKEMRDFSRTTSQIERKSMRSVMERLPDNRHDPHQNQSNYNMLQYFSRKYN 168
Query: 261 VPLEKPCCYDFPCKADC 311
+P+ C Y CKADC
Sbjct: 169 LPMPTHC-YRHECKADC 184
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +3
Query: 195 CGQPRPQPHQRETTAYCGGPSNVPLEKPCCYDFPCKADC 311
CG PRP P P P PCC P A C
Sbjct: 71 CGAPRPSPSCCPYVPPAPLPPPPPPASPCCGPSPVPAPC 109
>Z69792-1|CAB61002.1| 605|Caenorhabditis elegans Hypothetical
protein F40E10.1 protein.
Length = 605
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/60 (26%), Positives = 21/60 (35%)
Frame = +3
Query: 231 TTAYCGGPSNVPLEKPCCYDFPCKADCFNHGACTRPSGRYARTVWYPGECCPVVFPCQAF 410
TT P+ C C A C G +R G Y TV+ C + C+ F
Sbjct: 515 TTTTQAPPTTTTSTSQCASWSACSAQCGGCGTQSRRCGTYVETVYCNTNPCTGGYCCRPF 574
>D85744-1|BAA12861.1| 605|Caenorhabditis elegans HCH-1 protein.
Length = 605
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/60 (26%), Positives = 21/60 (35%)
Frame = +3
Query: 231 TTAYCGGPSNVPLEKPCCYDFPCKADCFNHGACTRPSGRYARTVWYPGECCPVVFPCQAF 410
TT P+ C C A C G +R G Y TV+ C + C+ F
Sbjct: 515 TTTTQAPPTTTTSTSQCASWSACSAQCGGCGTQSRRCGTYVETVYCNTNPCTGGYCCRPF 574
>Z77662-16|CAJ90504.1| 424|Caenorhabditis elegans Hypothetical
protein Y49A3A.1 protein.
Length = 424
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = -3
Query: 230 FPLVWLRPRLSTSRSFIVNATFSCYISIPCNWPTVFNTSWQY 105
+PL W+ P L T IVN T +S C T +W Y
Sbjct: 90 YPL-WVAPNLLTLIGLIVNLTTVLVLSFYCPTATETAPAWAY 130
>AL033512-5|CAA22073.2| 424|Caenorhabditis elegans Hypothetical
protein Y49A3A.1 protein.
Length = 424
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = -3
Query: 230 FPLVWLRPRLSTSRSFIVNATFSCYISIPCNWPTVFNTSWQY 105
+PL W+ P L T IVN T +S C T +W Y
Sbjct: 90 YPL-WVAPNLLTLIGLIVNLTTVLVLSFYCPTATETAPAWAY 130
>Z69788-8|CAA93644.3| 483|Caenorhabditis elegans Hypothetical
protein F09A5.1 protein.
Length = 483
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -3
Query: 266 GNITGSSTISRCFPLVWLRPRLSTSRSFIVNATFSCYISIPC 141
G + G+ +++CF WL T R+ +V A IS PC
Sbjct: 288 GTLLGN-LLAQCFLYGWLGAWSKTKRAHLVAAGCGALISTPC 328
>AF000191-1|AAB52884.1| 533|Caenorhabditis elegans Hypothetical
protein T23C6.3 protein.
Length = 533
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +2
Query: 368 SRRMLPGGFSLSSLHLPKSTLPSMLLPYVQQTCVKESQLKPVCP 499
SR+M+ + +L +P ++PSM+ P++ T S + P+ P
Sbjct: 445 SRQMMYPMVNYQALPMPPQSIPSMIPPFI-PTIPSTSTMPPMMP 487
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,953,956
Number of Sequences: 27780
Number of extensions: 291005
Number of successful extensions: 826
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 826
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1184216096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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