Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25i02
         (571 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z71259-5|CAA95796.1|  106|Caenorhabditis elegans Hypothetical pr...    66   2e-11
U40938-8|AAA81699.1|  123|Caenorhabditis elegans Hypothetical pr...    40   0.001
Z66500-5|CAA91306.1|  168|Caenorhabditis elegans Hypothetical pr...    40   0.001
Z81581-14|CAH10785.1|  628|Caenorhabditis elegans Hypothetical p...    27   9.5  
Z81581-12|CAB70244.3|  635|Caenorhabditis elegans Hypothetical p...    27   9.5  
Z81581-2|CAD56595.1|  672|Caenorhabditis elegans Hypothetical pr...    27   9.5  
Z81581-1|CAD56594.1|  655|Caenorhabditis elegans Hypothetical pr...    27   9.5  
Z75534-3|CAH04714.1|  628|Caenorhabditis elegans Hypothetical pr...    27   9.5  
Z75534-2|CAA99825.4|  635|Caenorhabditis elegans Hypothetical pr...    27   9.5  
Z49913-2|CAA90143.1|  660|Caenorhabditis elegans Hypothetical pr...    27   9.5  
U58754-3|AAX22293.1|  318|Caenorhabditis elegans Serpentine rece...    27   9.5  

>Z71259-5|CAA95796.1|  106|Caenorhabditis elegans Hypothetical
           protein F13G3.4 protein.
          Length = 106

 Score = 65.7 bits (153), Expect = 2e-11
 Identities = 32/101 (31%), Positives = 56/101 (55%), Gaps = 2/101 (1%)
 Frame = +3

Query: 153 DEVQQIVRDNVELCLGGNA-YSHSRTPQWITIITEKTLARLNKLNKPYKYIMRITITQ-K 326
           ++V  I++  ++  +G +  Y+H  + QW     E+   +L    KPYKY++  +  Q  
Sbjct: 6   EDVHMIIKQVLDEVVGASTQYTHKDSVQWNQKAVEQITKKLVAAGKPYKYVVTSSFLQIS 65

Query: 327 NGSGLHTAAAYYWDIATDGTCTVRWENKYMYCIVNIWALAL 449
           +GSGL+ +   YW+  TD +   RWE K M  IV ++A+A+
Sbjct: 66  SGSGLNVSTISYWNKVTDSSYMYRWEAKTMLAIVYVFAIAI 106


>U40938-8|AAA81699.1|  123|Caenorhabditis elegans Hypothetical
           protein D1009.5 protein.
          Length = 123

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
 Frame = +3

Query: 267 RLNKLNKP-YKYIMRITITQKNGSGLHTAAAYYWDIATDGTCTVRWENKYMYCIVNIWAL 443
           RL  L  P YKY+++  I ++ G+G  TA    WD   DG  T R+    ++C V ++A+
Sbjct: 61  RLKGLQLPRYKYVIQTMIAEQCGNGATTAVQCVWDEDCDGYLTQRYVTGSIWCEVLVFAI 120


>Z66500-5|CAA91306.1|  168|Caenorhabditis elegans Hypothetical
           protein T05C12.5 protein.
          Length = 168

 Score = 39.9 bits (89), Expect = 0.001
 Identities = 22/95 (23%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
 Frame = +3

Query: 156 EVQQIVRDNVELCLGGNAYSHSRTPQWITIITEKTLARLNKLNKPYKYIMRITITQKNGS 335
           E+  I++ + +  +G   YS  +   W++ + +     L KLN   K+++  TI+ K  +
Sbjct: 66  EIDLIIQKSFDSIIGKTPYSPFKMSDWMSKMIQTISDNLVKLNGSKKFLVHCTISAKTDN 125

Query: 336 -GLHTAAAYYWDIATDGTCTVRWENKYMYCIVNIW 437
             + TA    WD   D      W +K ++  V ++
Sbjct: 126 LAICTANMCSWDTTKDTAYYSEWMSKTIFGAVQVF 160


>Z81581-14|CAH10785.1|  628|Caenorhabditis elegans Hypothetical
           protein F08A10.1d protein.
          Length = 628

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 16/53 (30%), Positives = 29/53 (54%)
 Frame = +3

Query: 216 HSRTPQWITIITEKTLARLNKLNKPYKYIMRITITQKNGSGLHTAAAYYWDIA 374
           HSR     T  + +++A LN++N   ++I++  +T   G+ L    A+ W IA
Sbjct: 356 HSRV---FTDASSRSIAGLNRVNFNARFILKTLMTICPGTMLMIFTAFLWIIA 405


>Z81581-12|CAB70244.3|  635|Caenorhabditis elegans Hypothetical
           protein F08A10.1a protein.
          Length = 635

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 16/53 (30%), Positives = 29/53 (54%)
 Frame = +3

Query: 216 HSRTPQWITIITEKTLARLNKLNKPYKYIMRITITQKNGSGLHTAAAYYWDIA 374
           HSR     T  + +++A LN++N   ++I++  +T   G+ L    A+ W IA
Sbjct: 363 HSRV---FTDASSRSIAGLNRVNFNARFILKTLMTICPGTMLMIFTAFLWIIA 412


>Z81581-2|CAD56595.1|  672|Caenorhabditis elegans Hypothetical
           protein F08A10.1c protein.
          Length = 672

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 16/53 (30%), Positives = 29/53 (54%)
 Frame = +3

Query: 216 HSRTPQWITIITEKTLARLNKLNKPYKYIMRITITQKNGSGLHTAAAYYWDIA 374
           HSR     T  + +++A LN++N   ++I++  +T   G+ L    A+ W IA
Sbjct: 383 HSRV---FTDASSRSIAGLNRVNFNARFILKTLMTICPGTMLMIFTAFLWIIA 432


>Z81581-1|CAD56594.1|  655|Caenorhabditis elegans Hypothetical
           protein F08A10.1b protein.
          Length = 655

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 16/53 (30%), Positives = 29/53 (54%)
 Frame = +3

Query: 216 HSRTPQWITIITEKTLARLNKLNKPYKYIMRITITQKNGSGLHTAAAYYWDIA 374
           HSR     T  + +++A LN++N   ++I++  +T   G+ L    A+ W IA
Sbjct: 383 HSRV---FTDASSRSIAGLNRVNFNARFILKTLMTICPGTMLMIFTAFLWIIA 432


>Z75534-3|CAH04714.1|  628|Caenorhabditis elegans Hypothetical
           protein F08A10.1d protein.
          Length = 628

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 16/53 (30%), Positives = 29/53 (54%)
 Frame = +3

Query: 216 HSRTPQWITIITEKTLARLNKLNKPYKYIMRITITQKNGSGLHTAAAYYWDIA 374
           HSR     T  + +++A LN++N   ++I++  +T   G+ L    A+ W IA
Sbjct: 356 HSRV---FTDASSRSIAGLNRVNFNARFILKTLMTICPGTMLMIFTAFLWIIA 405


>Z75534-2|CAA99825.4|  635|Caenorhabditis elegans Hypothetical
           protein F08A10.1a protein.
          Length = 635

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 16/53 (30%), Positives = 29/53 (54%)
 Frame = +3

Query: 216 HSRTPQWITIITEKTLARLNKLNKPYKYIMRITITQKNGSGLHTAAAYYWDIA 374
           HSR     T  + +++A LN++N   ++I++  +T   G+ L    A+ W IA
Sbjct: 363 HSRV---FTDASSRSIAGLNRVNFNARFILKTLMTICPGTMLMIFTAFLWIIA 412


>Z49913-2|CAA90143.1|  660|Caenorhabditis elegans Hypothetical
           protein ZK938.3 protein.
          Length = 660

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -2

Query: 192 TTLHCLLLSVALHRR*MLNHFTKIPLRH 109
           T L CLL+S  +     L+ FTKIP  H
Sbjct: 146 TNLKCLLVSAKMLSSFFLDVFTKIPTTH 173


>U58754-3|AAX22293.1|  318|Caenorhabditis elegans Serpentine
           receptor, class sx protein16 protein.
          Length = 318

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
 Frame = -3

Query: 386 RAIC--SDVPVVRSGCMQTGTILLSYGNSHDIFVRLV 282
           R+IC  +  PV+ + C+QTGTI +    S D+F+ +V
Sbjct: 83  RSICFHTTFPVILAHCLQTGTICIL---SLDLFLAIV 116


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,948,713
Number of Sequences: 27780
Number of extensions: 269686
Number of successful extensions: 638
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 637
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1187327456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)