Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte25h24
(704 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0116 + 19901546-19901737,19901825-19901899,19902034-199021... 99 3e-21
04_03_0889 + 20568984-20569037,20569271-20569345,20569981-205700... 56 1e-13
07_03_1427 + 26495072-26495148,26495323-26495468,26495581-264957... 74 1e-13
06_01_0671 - 4899611-4899829,4900870-4901448 71 1e-12
07_03_1428 + 26498201-26498318,26498422-26498570,26498685-26499080 64 8e-11
02_01_0691 - 5167260-5167937 41 8e-04
01_03_0105 + 12604125-12604583 32 0.39
06_01_1135 - 9379361-9381018,9381356-9381665,9381811-9382764 30 2.1
07_03_0575 - 19637277-19637681 29 2.7
01_06_0813 - 32165310-32165546,32165691-32165783,32166075-321662... 29 2.7
01_01_1145 + 9073973-9074281,9075440-9075998,9076088-9076241,907... 29 2.7
01_01_0288 - 2373764-2373923,2374016-2374398,2375426-2375710 29 2.7
03_05_0428 + 24152409-24152783,24152885-24153139,24153204-24153917 29 3.6
07_03_1139 + 24254662-24255306 29 4.8
03_05_0276 + 22646416-22646760,22646858-22647090,22647184-226472... 29 4.8
03_02_0602 + 9759055-9759223,9759305-9759455,9759548-9759593,975... 29 4.8
07_03_1402 + 26302443-26302575,26302851-26302980,26303128-26303893 28 6.3
05_01_0288 + 2253005-2253137,2253269-2253398,2253504-2254524 28 6.3
03_03_0101 - 14431327-14432390,14432599-14432731 28 6.3
02_03_0183 + 16106205-16106474 28 6.3
02_02_0154 + 7263707-7263782,7263908-7264248 28 6.3
01_06_0448 + 29462920-29463052,29463220-29463349,29463608-294637... 28 6.3
01_02_0017 - 10215995-10217018,10217120-10217249,10217364-10217496 28 6.3
10_08_0023 - 14232878-14233651,14235321-14235623 28 8.3
02_05_0170 - 26431937-26434282 28 8.3
>02_04_0116 +
19901546-19901737,19901825-19901899,19902034-19902115,
19902219-19902298,19903279-19903482,19903625-19903750,
19903872-19903985,19904802-19904918
Length = 329
Score = 99.1 bits (236), Expect = 3e-21
Identities = 45/84 (53%), Positives = 61/84 (72%)
Frame = +3
Query: 435 FTHLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGLFIIDDKQNLRQ 614
F+HLAW+ T RK GGLG + PLISD + IS+ +GVL + GI RGLFIID + ++
Sbjct: 212 FSHLAWVQTDRKSGGLGDLKYPLISDVTKSISKSFGVLIPDQGIALRGLFIIDKEGVIQH 271
Query: 615 ITINDLPVGRSVEETLRLVQAFQF 686
TIN+L +GRSV+ET+R +QA Q+
Sbjct: 272 STINNLAIGRSVDETMRTLQALQY 295
Score = 96.3 bits (229), Expect = 2e-20
Identities = 45/69 (65%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Frame = +3
Query: 228 APQFKATAVVNGEFKDISLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGC 404
AP F A AV + EF ++ LSDY GK YV+LFFYPLDFTFVCPTEI AFS++ DEF K+
Sbjct: 74 APDFDAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYDEFEKLNT 133
Query: 405 EVLGASTDS 431
E+LG S DS
Sbjct: 134 EILGVSIDS 142
>04_03_0889 +
20568984-20569037,20569271-20569345,20569981-20570088,
20572066-20572179,20572393-20572509
Length = 155
Score = 55.6 bits (128), Expect(2) = 1e-13
Identities = 26/53 (49%), Positives = 37/53 (69%)
Frame = +3
Query: 540 GVLDEETGIPFRGLFIIDDKQNLRQITINDLPVGRSVEETLRLVQAFQFTDKH 698
GV + GI RGLFIID + ++ TIN+L +GRSV+ETLR +QA Q+ ++
Sbjct: 73 GVSIDSVGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQEN 125
Score = 38.3 bits (85), Expect(2) = 1e-13
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +3
Query: 339 FVCPTEIIAFSEKADEFRKIGCEVLGASTDS 431
FV EI AFS++ +EF KI EVLG S DS
Sbjct: 48 FVSSAEITAFSDRYEEFEKINTEVLGVSIDS 78
>07_03_1427 +
26495072-26495148,26495323-26495468,26495581-26495729,
26495829-26496224
Length = 255
Score = 73.7 bits (173), Expect = 1e-13
Identities = 47/148 (31%), Positives = 74/148 (50%), Gaps = 7/148 (4%)
Frame = +3
Query: 276 ISLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLGASTDSHFTHLAW 452
I + D+ G YV+LF +P DFT VC TE+ A + A EF K G ++LG S D +H W
Sbjct: 57 IRIHDFVGDTYVILFSHPGDFTPVCTTELAAMAGYAKEFDKRGVKLLGISCDDVQSHKDW 116
Query: 453 INTPRKQGGLGPMNIPLISDKSHRISRDYGVLD----EETG--IPFRGLFIIDDKQNLRQ 614
I + P+++D S + ++D + G +P R L I+ + ++
Sbjct: 117 IKDIEAYKPGNRVTYPIMADPSREAIKQLNMVDPDEKDSNGGHLPSRALHIVGPDKKVKL 176
Query: 615 ITINDLPVGRSVEETLRLVQAFQFTDKH 698
+ VGR+++E +R V A Q KH
Sbjct: 177 SFLYPACVGRNMDEVVRAVDALQTAAKH 204
>06_01_0671 - 4899611-4899829,4900870-4901448
Length = 265
Score = 70.5 bits (165), Expect = 1e-12
Identities = 42/135 (31%), Positives = 78/135 (57%), Gaps = 1/135 (0%)
Frame = +3
Query: 276 ISLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLGASTDSHFTHLAWI 455
+SLS +KG+ VV++FYP D T C + AF + ++F+K G EV+G S D +H +
Sbjct: 137 VSLSKFKGRPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDAASHKEF- 195
Query: 456 NTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETG-IPFRGLFIIDDKQNLRQITINDL 632
+K+ L P L+SD+ +++ +++GV + G +P R +++D ++ I N
Sbjct: 196 ---KKKYKL-PFT--LLSDEGNKVRKEWGVPADLFGTLPGRQTYVLDKNGVVQYIYNNQF 249
Query: 633 PVGRSVEETLRLVQA 677
+ + ETL+++Q+
Sbjct: 250 QPEKHIGETLKILQS 264
>07_03_1428 + 26498201-26498318,26498422-26498570,26498685-26499080
Length = 220
Score = 64.5 bits (150), Expect = 8e-11
Identities = 43/148 (29%), Positives = 69/148 (46%), Gaps = 7/148 (4%)
Frame = +3
Query: 276 ISLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLGASTDSHFTHLAW 452
I L D+ G YV++F +P DFT VC TE+ + A EF K G ++LG S D +H W
Sbjct: 22 IRLHDFVGDAYVIIFSHPADFTPVCTTELSEMAGYAGEFDKRGVKLLGFSCDDVESHKDW 81
Query: 453 INTPRKQGGLGPMNIPLISDKSHRISRDYGVLD---EETG---IPFRGLFIIDDKQNLRQ 614
I + P+++D R ++D ++T +P R L I+ + ++
Sbjct: 82 IKDIEAYKPGRRVGFPIVADPDREAIRQLNMIDADEKDTAGGELPNRALHIVGPDKKVKL 141
Query: 615 ITINDLPVGRSVEETLRLVQAFQFTDKH 698
+ GR++ E LR A +H
Sbjct: 142 SFLFPACTGRNMAEVLRATDALLTAARH 169
>02_01_0691 - 5167260-5167937
Length = 225
Score = 41.1 bits (92), Expect = 8e-04
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
Frame = +3
Query: 258 NGEFKDISLSDYK-GKYVVLFFYPLDFTFVCPTEII-AFSEKADEFRKIGCEVLGA-STD 428
+GE K +++++ G+ VLF P FT C + + F EKA E G + + S +
Sbjct: 81 DGELKTVTVAELTAGRKAVLFAVPGAFTPTCSQKHLPGFIEKAGELHAKGVDAIACVSVN 140
Query: 429 SHFTHLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGV 545
F AW ++ GLG ++ L+SD + ++R GV
Sbjct: 141 DAFVMRAW----KESLGLGDADVLLLSDGNLELTRALGV 175
>01_03_0105 + 12604125-12604583
Length = 152
Score = 32.3 bits (70), Expect = 0.39
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = +2
Query: 485 SHEHPSDKRQVAPHLPRLRSAGRGDGHPLPRTLHHRRQAEPQADHHQRPA 634
SH+H Q +P +LR GR DG H RRQ Q + +PA
Sbjct: 62 SHQHKLFYSQPSPPRAKLRLVGRIDGRKEEAAHHSRRQPSLQKEAAAKPA 111
>06_01_1135 - 9379361-9381018,9381356-9381665,9381811-9382764
Length = 973
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = -1
Query: 659 GLLHRPPHGQVVDGDLPEVLLVVDDEESSEGDARLLVQHSVVAGDAVRLVAYQRDVHG 486
G+L +G+VVD L + ++DD E +L +H A +R + RDV G
Sbjct: 841 GVLESNENGRVVDAVLGALCTLMDDAVDVERGVAVLAEHD-AARHVLRALRQHRDVGG 897
>07_03_0575 - 19637277-19637681
Length = 134
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/58 (31%), Positives = 23/58 (39%)
Frame = -2
Query: 514 LSLIRGMFMGPSPPCLRGVLIQARCVKCESVEAPSTSQPILRNSSAFSENAMISVGHT 341
+ + G P C R V + K ESV A + +L N F NA VG T
Sbjct: 49 IKFLSNKLSGHEPTCKRIVAVGTGSSKSESVVAVDKVESMLCNLDRFEANAQHEVGPT 106
>01_06_0813 -
32165310-32165546,32165691-32165783,32166075-32166218,
32166685-32166771,32166858-32167077,32167879-32168039
Length = 313
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -1
Query: 695 LVRELERLHQPQGLLHRPPHGQVVDGDLPEVLL 597
+VRE E+LHQ G P DLPE LL
Sbjct: 117 MVRETEKLHQQVGRYKSPDEHPFFPEDLPEPLL 149
>01_01_1145 +
9073973-9074281,9075440-9075998,9076088-9076241,
9077475-9077565,9077722-9077793,9077879-9078390,
9078854-9078923,9079514-9079579,9080266-9080570,
9080872-9081006,9081141-9081204,9081429-9081574,
9081669-9081773,9082310-9082490
Length = 922
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = +2
Query: 452 DQHAAQAGRTRSHEHPSDKRQVAPHLPRLRSAGRGDGHPLPRTLHHRRQAEPQADHHQR 628
+Q ++QAG P+ + P + + + G P+PR H+R + Q+ H QR
Sbjct: 616 NQRSSQAGTIDIDSKPAGGSKGNP-INIVNNGIEDSGQPIPRRRHNRGNRKAQSSHKQR 673
>01_01_0288 - 2373764-2373923,2374016-2374398,2375426-2375710
Length = 275
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = +3
Query: 465 RKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGLFIIDDKQNLRQITI 623
+K+ G G N+P D R ++DY +DE+ +P F I D++ + + +
Sbjct: 65 KKKKGSGAGNLPGAIDAEIREAQDYLAIDEQEPVPENFPFEILDEEGMSVVIL 117
>03_05_0428 + 24152409-24152783,24152885-24153139,24153204-24153917
Length = 447
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +2
Query: 455 QHAAQAGRTRSHEHPSDKRQVAPHLPRLRSAGRGDGHPLPRTLHHRRQAE 604
QH A+A R R + DK + H PR+ R HP R +++AE
Sbjct: 166 QHRARAARLRLLD--DDKEKPLLHTPRMMPTRRSPHHPRFRHQQQQQEAE 213
>07_03_1139 + 24254662-24255306
Length = 214
Score = 28.7 bits (61), Expect = 4.8
Identities = 21/70 (30%), Positives = 26/70 (37%), Gaps = 9/70 (12%)
Frame = +2
Query: 452 DQHAAQAGRTRSHEHPSDKRQVAPHLPRLR---------SAGRGDGHPLPRTLHHRRQAE 604
D A +T H D PHLP L +AG P P HHR ++
Sbjct: 140 DSSALCCPKTPPPAHRPDPATAVPHLPPLGRDPSPSPLPTAGENSTSPTPEREHHRGESP 199
Query: 605 PQADHHQRPA 634
A +RPA
Sbjct: 200 ADAFLARRPA 209
>03_05_0276 +
22646416-22646760,22646858-22647090,22647184-22647259,
22647383-22647459,22647559-22647592,22647699-22647848,
22647935-22648069,22648156-22648227
Length = 373
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -1
Query: 611 PEVLLVVDDEESSEGDARLLVQHS 540
P V++VVDD+E EGD +L ++
Sbjct: 81 PAVVVVVDDDEEGEGDPQLCAPYA 104
>03_02_0602 +
9759055-9759223,9759305-9759455,9759548-9759593,
9759974-9760033,9760519-9760555,9761268-9761347,
9761413-9761516,9761613-9761673,9762962-9763019,
9763866-9763918,9764357-9765320,9766131-9766185,
9767223-9768786
Length = 1133
Score = 28.7 bits (61), Expect = 4.8
Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 2/85 (2%)
Frame = -2
Query: 577 PRKGMPVSSSSTP*SREMRCDLSLIRGMFMGPSPPCLRGVLIQARCVKCESVEAPSTSQ- 401
P P +ST S D + RG+ G PP L C++C SV A +
Sbjct: 369 PSAAAPTGFASTDRSGGAGRDRAFARGICFGDPPPALS----PQYCLRCLSVAAKELADG 424
Query: 400 -PILRNSSAFSENAMISVGHTNVKS 329
P R ++ +++ S T+ S
Sbjct: 425 CPAKRRAAVWTDGCFASFADTSALS 449
>07_03_1402 + 26302443-26302575,26302851-26302980,26303128-26303893
Length = 342
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -3
Query: 573 GRGCPSPRPALRSRGRCGATCRL 505
G GC S P L RCG +CRL
Sbjct: 33 GHGCWSSVPKLAGLERCGKSCRL 55
>05_01_0288 + 2253005-2253137,2253269-2253398,2253504-2254524
Length = 427
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -3
Query: 573 GRGCPSPRPALRSRGRCGATCRL 505
G GC S P L RCG +CRL
Sbjct: 33 GHGCWSSVPKLAGLQRCGKSCRL 55
>03_03_0101 - 14431327-14432390,14432599-14432731
Length = 398
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -3
Query: 573 GRGCPSPRPALRSRGRCGATCRL 505
G GC S P L RCG +CRL
Sbjct: 33 GHGCWSSVPKLAGLERCGKSCRL 55
>02_03_0183 + 16106205-16106474
Length = 89
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +3
Query: 498 PLISDKSHRISRDYGVLDEETGIP 569
PL S HR SR +G L E +G P
Sbjct: 59 PLASSHEHRFSRLHGCLPESSGFP 82
>02_02_0154 + 7263707-7263782,7263908-7264248
Length = 138
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -2
Query: 568 GMPVSSSSTP*SREMRCDLSLIRGMFMGPSPPCLRGVLIQARCVKCESVEAPSTS 404
G+ +S +T S + C LSL + PS CL+ A + C + AP S
Sbjct: 25 GVIATSKATSKSYKAACTLSLATCLPSLPSDKCLKAAFAAATSLLCLTAGAPPPS 79
>01_06_0448 +
29462920-29463052,29463220-29463349,29463608-29463732,
29463923-29464458
Length = 307
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -3
Query: 573 GRGCPSPRPALRSRGRCGATCRL 505
G GC S P L RCG +CRL
Sbjct: 33 GHGCWSSVPRLAGLQRCGKSCRL 55
>01_02_0017 - 10215995-10217018,10217120-10217249,10217364-10217496
Length = 428
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -3
Query: 573 GRGCPSPRPALRSRGRCGATCRL 505
G GC S P L RCG +CRL
Sbjct: 33 GHGCWSTVPKLAGLQRCGKSCRL 55
>10_08_0023 - 14232878-14233651,14235321-14235623
Length = 358
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = -1
Query: 314 QHNIFPLVVRQRNVLEL-SVDDGRGLELGSGFGHLQRHLVETQRER 180
+HN F VRQ N VD R GF QRHL++T + R
Sbjct: 87 KHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQRHLLKTIKRR 132
>02_05_0170 - 26431937-26434282
Length = 781
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +3
Query: 33 RCFRFSSIIQKSLANSQVAMTMEHK--CYCRGDEIRSLDLDKPEHLMPVM 176
RCF I++ SLAN + H+ CY +E++ + + H M
Sbjct: 723 RCFSGMKIVKTSLANRMGDQQLSHRLICYIEKEEMKKVSNEAVVHRFMTM 772
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,234,968
Number of Sequences: 37544
Number of extensions: 368544
Number of successful extensions: 1436
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1392
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1433
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1815633512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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