Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte25h22
(731 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.11c |cdc11||SIN component scaffold protein Cdc11|Schizo... 40 3e-04
SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces pom... 38 0.002
SPBC887.09c |||leucine-rich repeat protein Sog2 |Schizosaccharom... 36 0.005
SPAC926.06c |||leucine-rich repeat protein, unknown|Schizosaccha... 36 0.005
SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr 1||... 35 0.014
SPBC1861.08c |||U2 snRNP-associated protein Lea1 |Schizosaccharo... 30 0.39
SPAC22H10.10 |alp21|sto1|tubulin specific chaperone cofactor E|S... 29 0.68
SPCC1494.07 |||conserved eukaryotic protein|Schizosaccharomyces ... 26 4.8
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 26 4.8
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 26 4.8
SPCC1183.11 ||SPCC31H12.01|MS ion channel protein 1|Schizosaccha... 26 6.4
SPBP8B7.29 |||para-aminobenzoate synthase |Schizosaccharomyces p... 26 6.4
SPBC887.19 |rft1||human RFT1 ortholog |Schizosaccharomyces pombe... 25 8.4
SPAC3H1.10 |||phytochelatin synthetase |Schizosaccharomyces pomb... 25 8.4
>SPCC1739.11c |cdc11||SIN component scaffold protein
Cdc11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1045
Score = 40.3 bits (90), Expect = 3e-04
Identities = 35/100 (35%), Positives = 47/100 (47%)
Frame = +1
Query: 268 LSENSFTNVTLMADLSIEILNLSRCKIDVIENASFKELQEMRVLDLSYNKLTAAKLSPHA 447
+ E SFTN L +E L L +I+ IE S LQ + VL L NKLT K S
Sbjct: 724 IKELSFTNSNLHR---LEELLLGNNEIEEIEEIS--SLQNLMVLQLDNNKLTNLKAS--- 775
Query: 448 FEGKYTPEQYEPLAAMRVLNLAYNDLHSLNQDLFEHLPQL 567
+P+ +R+L ++ N +H L D F HL L
Sbjct: 776 ----------QPMIHLRILRISNNAIHQLEVDQFPHLRTL 805
Score = 30.7 bits (66), Expect = 0.22
Identities = 39/159 (24%), Positives = 72/159 (45%), Gaps = 9/159 (5%)
Frame = +1
Query: 238 LADFKPKIVDLSENSFTNVTLMADLSIEILNLSRCKIDVIENASFKELQEMRVLDLSYNK 417
L++ P I +L+ + + + I +L+ + + SF L ++ LD+SYN+
Sbjct: 621 LSELCPSIEELTLEG-NEIAYLTGCPVTIRDLNAVENRLSSLTSFSNLLNLQYLDISYNQ 679
Query: 418 ---LTAAKLSPHAFEGK------YTPEQYEPLAAMRVLNLAYNDLHSLNQDLFEHLPQLE 570
LT H E K ++ + + L + L+ N + L+ +L +LE
Sbjct: 680 LEDLTGLSSLIHLRELKVDSNHLWSLDGIQHLDGLLKLSACNNRIKELS-FTNSNLHRLE 738
Query: 571 ELDISGNPLTTIDHVTLIAISSLPMLKVLRMRSCQLTEI 687
EL + N + I+ ISSL L VL++ + +LT +
Sbjct: 739 ELLLGNNEIEEIEE-----ISSLQNLMVLQLDNNKLTNL 772
Score = 30.7 bits (66), Expect = 0.22
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 3/113 (2%)
Frame = +1
Query: 268 LSENSFTNVTLM-ADLSIEILNLSRCKIDVIENASFKELQEMRVLDLSYNKLTAAKLSPH 444
LS N+F + L + L L+ ++ + + +RVLDLS+N ++
Sbjct: 852 LSNNTFVTLDCKHMFLGVRYLELANVQLKEVPKYIATSMPNLRVLDLSHNYISDI----- 906
Query: 445 AFEGKYTPEQYEPLAAMRVLNLAYNDLHSLNQ--DLFEHLPQLEELDISGNPL 597
E +PL + L L N + + D+ +L QL LD+ NPL
Sbjct: 907 --------ESLKPLQMIHRLYLVGNRIKKMRNLCDILANLKQLNVLDLRMNPL 951
>SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1692
Score = 37.5 bits (83), Expect = 0.002
Identities = 39/108 (36%), Positives = 53/108 (49%)
Frame = +1
Query: 376 ELQEMRVLDLSYNKLTAAKLSPHAFEGKYTPEQYEPLAAMRVLNLAYNDLHSLNQDLFEH 555
++ ++V++LS N L KL P A K T L MR L+ N + SL+ F
Sbjct: 750 QVSSLKVVNLSSNILEKIKL-PVATSKKLT-RTISQLKIMRTLS--GNPVSSLSSQEFV- 804
Query: 556 LPQLEELDISGNPLTTIDHVTLIAISSLPMLKVLRMRSCQLTEIPEKF 699
+P +EEL + N L D T A+ LKVL + LTEIP KF
Sbjct: 805 MPTVEELYLVDNRLGN-DCFT--ALEYFKCLKVLNLSYNYLTEIPSKF 849
Score = 34.7 bits (76), Expect = 0.014
Identities = 20/72 (27%), Positives = 37/72 (51%)
Frame = +1
Query: 478 EPLAAMRVLNLAYNDLHSLNQDLFEHLPQLEELDISGNPLTTIDHVTLIAISSLPMLKVL 657
E ++VLNL+YN L + F++ L+ L +SGN L + I+ ++ +L+ L
Sbjct: 827 EYFKCLKVLNLSYNYLTEIPSKFFQNFSDLKHLFVSGNELANLS----ISSTAQVLLETL 882
Query: 658 RMRSCQLTEIPE 693
+L+ P+
Sbjct: 883 YANGNRLSSFPK 894
Score = 33.9 bits (74), Expect = 0.024
Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 14/112 (12%)
Frame = +1
Query: 325 LNLSRCKIDVIENASFKELQEMRVLDLSYNKLT---------AAKLSPHAFEGKYTPEQY 477
L++SR ++VI + E+ L++S+N KL +
Sbjct: 410 LDISRSNLEVIPVKIYPYAHELISLNVSHNLSLDLPLDFMERCVKLKRLDISNNLRSPRG 469
Query: 478 EPLAAMR---VLNLAYNDLHSLNQDLFEHLPQ--LEELDISGNPLTTIDHVT 618
+P+ A+R VLN++ ND++ L+ +F L + L+EL+I+ N L + H T
Sbjct: 470 KPITALRQLEVLNMSRNDIYELDPLIFSGLSRNSLKELNIANNKLFFLPHST 521
Score = 30.7 bits (66), Expect = 0.22
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 16/108 (14%)
Frame = +1
Query: 316 IEILNLSRCKIDVIENASFKELQEMRVLDLSYNKLTAAKLSPHA---FEGKYT------- 465
+++LNLS + I + F+ +++ L +S N+L +S A E Y
Sbjct: 832 LKVLNLSYNYLTEIPSKFFQNFSDLKHLFVSGNELANLSISSTAQVLLETLYANGNRLSS 891
Query: 466 -PEQYEPLAAMRVLNLAYNDLHSLNQDLFEH-----LPQLEELDISGN 591
P+ ++R L+++ N+L +L + E LPQLE L++SGN
Sbjct: 892 FPKNEALSKSLRFLDISTNNLQNLAVEKAEKKSLTKLPQLEYLNLSGN 939
Score = 26.6 bits (56), Expect = 3.6
Identities = 33/138 (23%), Positives = 60/138 (43%), Gaps = 11/138 (7%)
Frame = +1
Query: 313 SIEILNLSRCKIDVIENASFKELQEMRVLDLSYNKLTA--------AKLSPHAFEGKYTP 468
S++ LN++ K+ + +++ + L + LDLSYN ++L F
Sbjct: 503 SLKELNIANNKLFFLPHST-RYLVNLTYLDLSYNNFVTFPLIITELSQLETLNFSHNLLS 561
Query: 469 E---QYEPLAAMRVLNLAYNDLHSLNQDLFEHLPQLEELDISGNPLTTIDHVTLIAISSL 639
+ + L ++ L L +NDL + L LE +D+S N +T I ++S
Sbjct: 562 QISSKIGSLVKLKHLYLQFNDLSNRLPQEIGLLKNLETIDLSYNAITNI-----ASLSEC 616
Query: 640 PMLKVLRMRSCQLTEIPE 693
P L + + +C L E
Sbjct: 617 PKLNSINV-ACNLLSFYE 633
>SPBC887.09c |||leucine-rich repeat protein Sog2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 886
Score = 36.3 bits (80), Expect = 0.005
Identities = 37/124 (29%), Positives = 55/124 (44%), Gaps = 6/124 (4%)
Frame = +1
Query: 358 ENASFKELQEMRVLDLSYNKLTA-----AKLS-PHAFEGKYTPEQYEPLAAMRVLNLAYN 519
ENA +L + + +L Y +L A+L+ H F PE + +R LN+ N
Sbjct: 27 ENALTLDLSHLNLRELPYEQLERIQGRIARLALGHNFIKSIGPEILK-FTRLRYLNIRSN 85
Query: 520 DLHSLNQDLFEHLPQLEELDISGNPLTTIDHVTLIAISSLPMLKVLRMRSCQLTEIPEKF 699
L + L L LE LDIS N + + + +L LKVL + +L E+P
Sbjct: 86 VLREFPESLCR-LESLEILDISRNKIKQLPE----SFGALMNLKVLSISKNRLFELPTYI 140
Query: 700 LHTP 711
H P
Sbjct: 141 AHMP 144
>SPAC926.06c |||leucine-rich repeat protein,
unknown|Schizosaccharomyces pombe|chr 1|||Manual
Length = 621
Score = 36.3 bits (80), Expect = 0.005
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 13/107 (12%)
Frame = +1
Query: 325 LNLSRCKIDVIENASFKELQEMRVLDLSYNKLT-------------AAKLSPHAFEGKYT 465
L S CK+ I F LQ + LDLS N+LT + L+ + G T
Sbjct: 337 LRCSSCKLKSIPKNVFLSLQSLVSLDLSGNELTEIPYALGELPQLCSLNLASNKITGCRT 396
Query: 466 PEQYEPLAAMRVLNLAYNDLHSLNQDLFEHLPQLEELDISGNPLTTI 606
+ L+ +++L L+ N L SL+ E++P LE+LDI N +T +
Sbjct: 397 -FYHISLSHLQILVLSRNHLTSLSG--LENVPSLEKLDIRDNSITDV 440
>SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1116
Score = 34.7 bits (76), Expect = 0.014
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +1
Query: 442 HAFEGKYTPEQYEPLAAMRVLNLAYNDLHSLNQDLFEHLPQLEELDISGNPLTTI 606
H K++ ++P A+ + N + +L++ FE P L+E D+SG+P I
Sbjct: 578 HNEASKFSHTSFDPKASSKSSNSLKESVEALSEIPFEDAPALDESDLSGDPFWAI 632
>SPBC1861.08c |||U2 snRNP-associated protein Lea1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 239
Score = 29.9 bits (64), Expect = 0.39
Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 1/104 (0%)
Frame = +1
Query: 349 DVIENASFKELQEMRVLDLSYNKLTAAKLSPHAFEGKYTPEQYEPLAAMRVLNLAYNDLH 528
D+ +F ++ ++ L N++TA ++P GK P ++ L+LA N L
Sbjct: 52 DIRYLGNFPRMKRLQTLLCGNNRITA--IAPDI--GKVLPN-------LKTLSLAQNHLQ 100
Query: 529 SL-NQDLFEHLPQLEELDISGNPLTTIDHVTLIAISSLPMLKVL 657
+ + D PQL L NP+ + L I +P L +L
Sbjct: 101 EIADLDPLASCPQLTNLSCIDNPVAQKQYYRLYLIWRIPSLHIL 144
>SPAC22H10.10 |alp21|sto1|tubulin specific chaperone cofactor
E|Schizosaccharomyces pombe|chr 1|||Manual
Length = 511
Score = 29.1 bits (62), Expect = 0.68
Identities = 34/117 (29%), Positives = 59/117 (50%)
Frame = +1
Query: 313 SIEILNLSRCKIDVIENASFKELQEMRVLDLSYNKLTAAKLSPHAFEGKYTPEQYEPLAA 492
S+E+L L +I + + SFK LQ ++ L L+ N L+ ++ +G Y + ++
Sbjct: 218 SLEVLYLEANEIILSKATSFKNLQFLQTLSLANN------LNLYSADG-YAVDVFQ---G 267
Query: 493 MRVLNLAYNDLHSLNQDLFEHLPQLEELDISGNPLTTIDHVTLIAISSLPMLKVLRM 663
+ LNL+ L + + L +L LDIS N + I +L + +L LK LR+
Sbjct: 268 INNLNLSSTSLADVAELPVHTLHKLTFLDISENNIRDIR--SLDHLRTLENLKHLRI 322
>SPCC1494.07 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1502
Score = 26.2 bits (55), Expect = 4.8
Identities = 21/95 (22%), Positives = 41/95 (43%)
Frame = +1
Query: 196 QNLDTFFSKEEWAALADFKPKIVDLSENSFTNVTLMADLSIEILNLSRCKIDVIENASFK 375
Q + ++ EW L+ F+P I + + V +A LS+ L L K+ + K
Sbjct: 950 QYAQPYGNENEWTGLSQFEPLIFKCTASRICKVREIASLSLTCL-LDCSKMTTFIVSQLK 1008
Query: 376 ELQEMRVLDLSYNKLTAAKLSPHAFEGKYTPEQYE 480
+ ++ ++ + KL + F K T +Q +
Sbjct: 1009 GVAGLQQNEI-HGKLLTIRAVLSCFFSKLTLQQVQ 1042
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 26.2 bits (55), Expect = 4.8
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
Frame = +1
Query: 289 NVTLMADLSIEILNLSRCKIDVIENASFKELQEMRVLDLSYNKLTAA----KLSPHAFEG 456
N LM L+ +I L R DV + E +E ++ KL+A+ A E
Sbjct: 654 NTNLMEILNDKISVLQRQLTDVKDELDVSE-EEREEAIVAGQKLSASFELMSNEKQALEL 712
Query: 457 KYTPEQYEPLAAMRVLNLAYNDLHSLNQDLFE 552
KY+ + E + A +L+ +L L++ LFE
Sbjct: 713 KYSSLKNELINAQNLLDRREEELSELSKKLFE 744
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 26.2 bits (55), Expect = 4.8
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +1
Query: 550 EHLPQLEELDISGNPLTTIDHVTLIAISSLPMLKVLRMRSCQLTEIPEKFL 702
EHL L ELD + + L+T+D S + LK+ + C + K +
Sbjct: 1141 EHL--LNELDDTHSSLSTVDFTVNNTESLINSLKIFKKAGCYKLNVEHKII 1189
>SPCC1183.11 ||SPCC31H12.01|MS ion channel protein
1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1011
Score = 25.8 bits (54), Expect = 6.4
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -3
Query: 69 SSDEEKYEDSHSPTHSDENR 10
+SD + ++ HSP HS EN+
Sbjct: 41 NSDAKAHQPQHSPQHSTENQ 60
>SPBP8B7.29 |||para-aminobenzoate synthase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 718
Score = 25.8 bits (54), Expect = 6.4
Identities = 10/39 (25%), Positives = 22/39 (56%)
Frame = +1
Query: 499 VLNLAYNDLHSLNQDLFEHLPQLEELDISGNPLTTIDHV 615
+++L NDLH L + H+P+L ++ N + + ++
Sbjct: 560 IIDLIRNDLHQLAKKNSVHVPELYSVEEHSNVYSLLSNI 598
>SPBC887.19 |rft1||human RFT1 ortholog |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 527
Score = 25.4 bits (53), Expect = 8.4
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +3
Query: 570 GAGYQWESPDHDR-SRYFDCHFEFADAQGVENAF 668
GAG +W SPD ++ + F A GV AF
Sbjct: 351 GAGSKWASPDSSSILSWYAMYIPFMAANGVLEAF 384
>SPAC3H1.10 |||phytochelatin synthetase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 414
Score = 25.4 bits (53), Expect = 8.4
Identities = 16/60 (26%), Positives = 26/60 (43%)
Frame = -1
Query: 704 WRNFSGISVSWQERILNTLSIGKLEMAIKVT*SIVVRGFPLISSSSNCGKCSNRSWFKEC 525
WRN S + + N ++ ++ ++I + PLI SN K + FKEC
Sbjct: 270 WRNVSKHILQQAATVKNADNLAEILLSINQS------SIPLIQERSNSSKSGDFEHFKEC 323
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,875,987
Number of Sequences: 5004
Number of extensions: 57484
Number of successful extensions: 224
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 223
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 345237368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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