Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25h21
         (737 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces p...    29   0.91 
SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces ...    29   0.91 
SPBC713.07c |||vacuolar polyphosphatase |Schizosaccharomyces pom...    26   4.9  
SPBC12C2.03c |||FAD binding protein |Schizosaccharomyces pombe|c...    26   4.9  
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar...    26   4.9  
SPAC1002.06c |bqt2|mug18, rec23|bouquet formation protein Bqt2|S...    26   4.9  

>SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 555

 Score = 28.7 bits (61), Expect = 0.91
 Identities = 16/59 (27%), Positives = 26/59 (44%)
 Frame = +1

Query: 517 KELVKKIYLDVENNEDLKGKKSVYMITDVLMAKTIEFRVTIGSSSRIFHLGNASPLVFG 693
           +EL+   Y      +  KG     +    ++   I F  T G+   I +LG  +PL+FG
Sbjct: 276 RELIGNNYYFYYATQVFKGTGMTDIFLPAVILGAINFGTTFGALYTIDNLGRRNPLIFG 334


>SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 557

 Score = 28.7 bits (61), Expect = 0.91
 Identities = 16/59 (27%), Positives = 26/59 (44%)
 Frame = +1

Query: 517 KELVKKIYLDVENNEDLKGKKSVYMITDVLMAKTIEFRVTIGSSSRIFHLGNASPLVFG 693
           +EL+   Y      +  KG     +    ++   I F  T G+   I +LG  +PL+FG
Sbjct: 276 RELIGNNYYFYYATQVFKGTGMTDIFLPAVILGAINFGTTFGALYTIDNLGRRNPLIFG 334


>SPBC713.07c |||vacuolar polyphosphatase |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 577

 Score = 26.2 bits (55), Expect = 4.9
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +1

Query: 364 DYVKWLEDGDFQDIDFKFPHESVKITLQDEAIKNKV 471
           D++ W  D    D D  FP    +I   +E + NK+
Sbjct: 125 DFILWTGDNSRHDNDNHFPRTQSEILASNEDLVNKM 160


>SPBC12C2.03c |||FAD binding protein |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 571

 Score = 26.2 bits (55), Expect = 4.9
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -1

Query: 671 LPRWKILEDEPIVTRNSMVFAIS 603
           +PRW  L ++P V+ N + FA++
Sbjct: 318 MPRWYSLSNDPKVSNNVLEFAVT 340


>SPBC1539.08 |||ADP-ribosylation factor, Arf
           family|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 184

 Score = 26.2 bits (55), Expect = 4.9
 Identities = 19/66 (28%), Positives = 31/66 (46%)
 Frame = +1

Query: 436 ITLQDEAIKNKVRVIMVNFSRCTIPKNKELVKKIYLDVENNEDLKGKKSVYMITDVLMAK 615
           I + D A  N++        R  I  ++E+   + L + N +DL G  S   ITDVL   
Sbjct: 93  IFVVDSADSNRISEARQELHR--IISDREMRDCLLLVLANKQDLPGALSPAQITDVLQLD 150

Query: 616 TIEFRV 633
            ++ R+
Sbjct: 151 KLKDRL 156


>SPAC1002.06c |bqt2|mug18, rec23|bouquet formation protein
           Bqt2|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 118

 Score = 26.2 bits (55), Expect = 4.9
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = +1

Query: 106 YSHEIRKDVRLENLKSLKLEDAWPFIRDEIEI 201
           +S  +RK VRL N KS++    W +I +++ +
Sbjct: 42  FSMHLRKHVRLPNYKSVQCRSPW-WIAEQVAV 72


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,708,629
Number of Sequences: 5004
Number of extensions: 51157
Number of successful extensions: 137
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 137
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 349251756
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)