Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25h21
         (737 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   4.0  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   4.0  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   4.0  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   4.0  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          22   6.9  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    21   9.1  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   9.1  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 684 KRRCITEMEDSRRRANCHS 628
           K   I ++ED R + +CHS
Sbjct: 480 KSSSINKLEDLRNKKSCHS 498


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 684 KRRCITEMEDSRRRANCHS 628
           K   I ++ED R + +CHS
Sbjct: 480 KSSSINKLEDLRNKKSCHS 498


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 684 KRRCITEMEDSRRRANCHS 628
           K   I ++ED R + +CHS
Sbjct: 480 KSSSINKLEDLRNKKSCHS 498


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -2

Query: 565 DLHYFQHPNKFF*RVPYS*ESYIW 494
           D  YF  PN+    VP S  +Y W
Sbjct: 241 DPDYFDIPNELVLEVPLSHPTYDW 264


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -3

Query: 651 RRRANCHSELYGLRHKHISDHIN 583
           +R ++CHS    LRH+  + + N
Sbjct: 225 QRTSSCHSRYEDLRHEDRNSYRN 247


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -3

Query: 696 KSKYKRRCITE 664
           K+KY R CITE
Sbjct: 377 KAKYLRACITE 387


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = +2

Query: 224 CVYRTSLKLIYTKSRLCSCQTRKRLTVKTSRLSEN 328
           C Y  +    Y K+    C T KRLT K +   EN
Sbjct: 436 CRYPNASVTPYNKNYTKFCSTEKRLT-KQNTAFEN 469


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,806
Number of Sequences: 438
Number of extensions: 3333
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23023035
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)