Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte25h18
(695 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC17H9.19c |cdt2|sev1|WD repeat protein Cdt2|Schizosaccharomyc... 30 0.36
SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces po... 29 0.84
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 28 1.1
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 28 1.1
SPBC36.11 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||M... 28 1.1
SPAC823.16c |mug179||WD repeat protein Mug179|Schizosaccharomyce... 27 3.4
SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces po... 27 3.4
SPBC31A8.01c |cwl1|rtn1, SPBC651.13c|reticulon-like protein|Schi... 27 3.4
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 26 5.9
SPBC3H7.01 |spo14|stl1, SPBP16F5.01c|WD repeat protein Spo14|Sch... 26 5.9
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 25 7.8
>SPAC17H9.19c |cdt2|sev1|WD repeat protein Cdt2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 490
Score = 29.9 bits (64), Expect = 0.36
Identities = 30/111 (27%), Positives = 45/111 (40%), Gaps = 10/111 (9%)
Frame = +2
Query: 167 FSPDGESVAVIVEDIVH-VYNVQTCELVRTLESETPIDGFVG-----IEFPQNEDYNLYG 328
FS D +A D V+++ T + + L +DG+ + F + YNL
Sbjct: 188 FSKDDSLLATSSGDQTSKVFDLSTQQCITRL-GRRGVDGYHSHSVKQVNFCNDSPYNLVS 246
Query: 329 CSKSGLVTIWTW-DKGAVLRDTHLQIPANLIVLTFDLINEN---ECFITGA 469
CS+ G + W G + H Q P VL +EN +C IT A
Sbjct: 247 CSRDGSIIFWDMRTHGITIDGEHFQKP----VLRIRKAHENSGRDCSITSA 293
>SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1313
Score = 28.7 bits (61), Expect = 0.84
Identities = 19/84 (22%), Positives = 31/84 (36%)
Frame = +2
Query: 296 FPQNEDYNLYGCSKSGLVTIWTWDKGAVLRDTHLQIPANLIVLTFDLINENECFITGAGG 475
F Q ED L ++ +W W + L A V L+NE++ + G
Sbjct: 998 FHQFED-QLITLGDKDIIQVWDWRRNRCLNSFKTSASATTNVTDMQLLNEDDVALLMTGS 1056
Query: 476 SYSKNIHYASYSIKTGELLCEYGT 547
S Y Y + EL+ + +
Sbjct: 1057 SDGTIKLYRDYENEKVELVTSWNS 1080
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 28.3 bits (60), Expect = 1.1
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSPSGEN 166
SS +S PT+ S +S S +SS TL + ++SS+ + + SP+ +
Sbjct: 292 SSSSSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSSSFSSSPTSSS 340
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 28.3 bits (60), Expect = 1.1
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
SS +S P S G++ S +TSS V T SST+ + +P
Sbjct: 927 SSVLNSSTPITSSTGLNTSTPITSSSVLNSSTPITSSTVLNSSTP 971
Score = 28.3 bits (60), Expect = 1.1
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
SS +S P S V+ S +TSS V T SST+ T +P
Sbjct: 1335 SSVLNSSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNTSTP 1379
Score = 28.3 bits (60), Expect = 1.1
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
SS +S P S V+ S +TSS V T SST+ T +P
Sbjct: 2175 SSVLNSSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNTSTP 2219
Score = 27.9 bits (59), Expect = 1.5
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
SS +S P S ++ S +TSS V T SST+ T +P
Sbjct: 519 SSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNTSTP 563
Score = 27.9 bits (59), Expect = 1.5
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
SS +S P S V+ S +TSS V T SST+ T +P
Sbjct: 543 SSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTP 587
Score = 27.9 bits (59), Expect = 1.5
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
SS +S P S ++ S +TSS V T SST+ T +P
Sbjct: 855 SSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTP 899
Score = 27.9 bits (59), Expect = 1.5
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
SS +S P S ++ S +TSS V T SST+ T +P
Sbjct: 1287 SSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNTSTP 1331
Score = 27.9 bits (59), Expect = 1.5
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
SS +S P S ++ S +TSS V T SST+ T +P
Sbjct: 1791 SSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTP 1835
Score = 27.9 bits (59), Expect = 1.5
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
SS +S P S V+ S +TSS V T SST+ T +P
Sbjct: 2319 SSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTP 2363
Score = 27.9 bits (59), Expect = 1.5
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
SS +S P S ++ S +TSS V T SST+ T +P
Sbjct: 2463 SSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTP 2507
Score = 27.9 bits (59), Expect = 1.5
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
SS +S P S ++ S +TSS V T SST+ T +P
Sbjct: 2631 SSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNTSTP 2675
Score = 27.9 bits (59), Expect = 1.5
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
SS +S P S V+ S +TSS V T SST+ T +P
Sbjct: 2655 SSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTP 2699
Score = 27.9 bits (59), Expect = 1.5
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
SS +S P S V+ S +TSS V T SST+ T +P
Sbjct: 2727 SSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTP 2771
Score = 27.9 bits (59), Expect = 1.5
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
SS +S P S ++ S +TSS V T SST+ T +P
Sbjct: 2859 SSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNTSTP 2903
Score = 27.9 bits (59), Expect = 1.5
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
SS +S P S V+ S +TSS V T SST+ T +P
Sbjct: 2883 SSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTP 2927
Score = 27.9 bits (59), Expect = 1.5
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
SS +S P S ++ S +TSS V T SST+ T +P
Sbjct: 2955 SSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNTSTP 2999
Score = 27.9 bits (59), Expect = 1.5
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
SS +S P S V+ S +TSS V T SST+ T +P
Sbjct: 2979 SSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTP 3023
Score = 27.9 bits (59), Expect = 1.5
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
SS +S P S V+ S +TSS V T SST+ T +P
Sbjct: 3243 SSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTP 3287
Score = 27.5 bits (58), Expect = 1.9
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
SS +S P S V+ S +TSS V T SST+ T +P
Sbjct: 1143 SSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVVNTSTP 1187
Score = 27.5 bits (58), Expect = 1.9
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
SS +S P S V+ S +TSS V T SST+ T +P
Sbjct: 1407 SSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVVNTSTP 1451
Score = 27.5 bits (58), Expect = 1.9
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
SS +S P S V+ S +TSS V T SST+ T +P
Sbjct: 1455 SSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVVNTSTP 1499
Score = 27.5 bits (58), Expect = 1.9
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
SS +S P S V+ S +TSS V T SST+ T +P
Sbjct: 2247 SSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVVNTSTP 2291
Score = 27.1 bits (57), Expect = 2.6
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
SS +S P S ++ S +TSS V T SST T +P
Sbjct: 675 SSVLNSSTPITSSTALNTSTPITSSSVLNSSTAITSSTALNTSTP 719
Score = 27.1 bits (57), Expect = 2.6
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
SS +S P S ++ S +TSS V T SST+ T +P
Sbjct: 795 SSVLNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTSTP 839
Score = 27.1 bits (57), Expect = 2.6
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
SS +S P S ++ S +TSS V T SST+ T +P
Sbjct: 1083 SSVLNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTSTP 1127
Score = 26.6 bits (56), Expect = 3.4
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
SS +S P S ++ S +TSS V T SST+ T +P
Sbjct: 747 SSVLNSSTPITSSSILNSSTPITSSSVLNSSTPITSSTVVNTSTP 791
Score = 26.6 bits (56), Expect = 3.4
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
SS +S P S ++ S +TSS V T SST+ T +P
Sbjct: 1983 SSVLNSSTPITSSSVLNTSTPITSSSVLNSSTPITSSTVVNTSTP 2027
Score = 26.2 bits (55), Expect = 4.5
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
S+ S P S V+ S +TSS V T SST+ T +P
Sbjct: 1155 STVVNTSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNTSTP 1199
Score = 26.2 bits (55), Expect = 4.5
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
SS +S P S V+ S +TSS V T SST+ + +P
Sbjct: 1311 SSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNSSTP 1355
Score = 26.2 bits (55), Expect = 4.5
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
S+ +S P S V+ S +TSS V T SST+ T +P
Sbjct: 1431 STVVNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTP 1475
Score = 26.2 bits (55), Expect = 4.5
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
S+ S P S V+ S +TSS V T SST+ T +P
Sbjct: 1467 STVVNTSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNTSTP 1511
Score = 26.2 bits (55), Expect = 4.5
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
S+ +S P S ++ S +TSS V T SST+ T +P
Sbjct: 1635 STVLNSSTPITSSTALNTSPPITSSTVVNSSTPITSSTVVNTSTP 1679
Score = 26.2 bits (55), Expect = 4.5
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
S+ +S P S ++ S +TSS V T SST+ T +P
Sbjct: 1683 STVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTP 1727
Score = 26.2 bits (55), Expect = 4.5
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
SS +S P S V+ S +TSS V T SST T +P
Sbjct: 1935 SSVLNSSTPITSSTVVNSSTPITSSSVLNSSTPITSSTALNTSTP 1979
Score = 26.2 bits (55), Expect = 4.5
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
SS +S P S V+ S +TSS V T SST T +P
Sbjct: 2127 SSVLNSSTPITSSTVVNSSTPITSSSVLNSSTPITSSTALNTSTP 2171
Score = 26.2 bits (55), Expect = 4.5
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
SS +S P S ++ S +TSS V T SST+ + +P
Sbjct: 2151 SSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNSSTP 2195
Score = 26.2 bits (55), Expect = 4.5
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
S+ +S P S ++ S +TSS V T SST+ T +P
Sbjct: 2295 STVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTP 2339
Score = 26.2 bits (55), Expect = 4.5
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
SS +S P S V+ S +TSS V T SST T +P
Sbjct: 2439 SSVLNSSTPITSSTVVNSSTPITSSSVLNSSTPITSSTALNTSTP 2483
Score = 26.2 bits (55), Expect = 4.5
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
S+ +S P S ++ S +TSS V T SST+ T +P
Sbjct: 2703 STVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTP 2747
Score = 25.8 bits (54), Expect = 5.9
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
SS +S P S ++ S +TSS V T SST T +P
Sbjct: 651 SSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTP 695
Score = 25.8 bits (54), Expect = 5.9
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
SS +S P S V+ S +TSS V T SST+ + +P
Sbjct: 771 SSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVLNSSTP 815
Score = 25.8 bits (54), Expect = 5.9
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
SS +S P S ++ S +TSS V T SST T +P
Sbjct: 987 SSVLNSSTPITSSSVLNTSTPITSSSVLNSSTAITSSTALNTSTP 1031
Score = 25.8 bits (54), Expect = 5.9
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
S+ S P S ++ S +TSS V T SST+ T +P
Sbjct: 1119 STVVNTSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTP 1163
Score = 25.8 bits (54), Expect = 5.9
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
SS +S P S V+ S +TSS V T SST T +P
Sbjct: 1551 SSVLNSSTPITSSTVVNTSTPITSSSVVNSSTPITSSTALNTSTP 1595
Score = 25.8 bits (54), Expect = 5.9
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
SS +S P S ++ S +TSS V T SST+ + +P
Sbjct: 1599 SSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVLNSSTP 1643
Score = 25.8 bits (54), Expect = 5.9
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
SS +S P S V+ S +TSS V T SST+ + +P
Sbjct: 1707 SSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVVNSSTP 1751
Score = 25.8 bits (54), Expect = 5.9
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
SS +S P S ++ S +TSS V T SST T +P
Sbjct: 1767 SSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTP 1811
Score = 25.8 bits (54), Expect = 5.9
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
SS +S P S ++ S +TSS V T SST+ + +P
Sbjct: 1863 SSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVLNSSTP 1907
Score = 25.8 bits (54), Expect = 5.9
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
SS +S P S ++ S +TSS V T SST+ + +P
Sbjct: 2055 SSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVLNSSTP 2099
Score = 25.8 bits (54), Expect = 5.9
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
S+ S P S ++ S +TSS V T SST+ T +P
Sbjct: 2355 STVVNTSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNTSTP 2399
Score = 25.8 bits (54), Expect = 5.9
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
S+ S P S ++ S +TSS V T SST+ T +P
Sbjct: 2763 STVVNTSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTP 2807
Score = 25.4 bits (53), Expect = 7.8
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
SS +S P S ++ S +TSS V T SST+ + +P
Sbjct: 459 SSVLNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTP 503
Score = 25.4 bits (53), Expect = 7.8
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
SS +S P S V+ S +TSS V T SST T +P
Sbjct: 471 SSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTP 515
Score = 25.4 bits (53), Expect = 7.8
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
SS +S P S V+ S +TSS V T SST T +P
Sbjct: 879 SSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTP 923
Score = 25.4 bits (53), Expect = 7.8
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
SS +S P S V+ S +TSS V T SST T +P
Sbjct: 1035 SSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTP 1079
Score = 25.4 bits (53), Expect = 7.8
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
S+ +S P S ++ S +TSS V T SST+ T +P
Sbjct: 1383 STVVNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTSTP 1427
Score = 25.4 bits (53), Expect = 7.8
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
S+ S P S ++ S +TSS V T SST+ T +P
Sbjct: 1527 STVLNTSTPITSSSVLNSSTPITSSSVLNSSTPITSSTVVNTSTP 1571
Score = 25.4 bits (53), Expect = 7.8
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
SS +S P S ++ S +TSS V T SST T +P
Sbjct: 1575 SSVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTP 1619
Score = 25.4 bits (53), Expect = 7.8
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
SS +S P S V+ S +TSS V T SST T +P
Sbjct: 1815 SSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTP 1859
Score = 25.4 bits (53), Expect = 7.8
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
SS +S P S V+ S +TSS V T SST T +P
Sbjct: 2007 SSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTP 2051
Score = 25.4 bits (53), Expect = 7.8
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
S+ +S P S ++ S +TSS V T SST+ T +P
Sbjct: 2223 STVVNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTSTP 2267
Score = 25.4 bits (53), Expect = 7.8
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
SS +S P S V+ S +TSS V T SST+ + +P
Sbjct: 2487 SSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTP 2531
Score = 25.4 bits (53), Expect = 7.8
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
S+ +S P S ++ S +TSS V T SST+ T +P
Sbjct: 2511 STVVNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTSTP 2555
Score = 25.4 bits (53), Expect = 7.8
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
SS +S P S V+ S +TSS V T SST T +P
Sbjct: 2583 SSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTP 2627
Score = 25.4 bits (53), Expect = 7.8
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
SS +S P S V+ S +TSS V T SST T +P
Sbjct: 2679 SSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTP 2723
Score = 25.4 bits (53), Expect = 7.8
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
SS +S P S V+ S +TSS V T SST+ + +P
Sbjct: 2787 SSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTP 2831
Score = 25.4 bits (53), Expect = 7.8
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
SS +S P S V+ S +TSS V T SST T +P
Sbjct: 2907 SSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTP 2951
Score = 25.4 bits (53), Expect = 7.8
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
SS +S P S V+ S +TSS V T SST T +P
Sbjct: 3003 SSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTP 3047
Score = 25.4 bits (53), Expect = 7.8
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
SS +S P S V+ S +TSS V T SST T +P
Sbjct: 3267 SSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTTLNTSTP 3311
Score = 25.4 bits (53), Expect = 7.8
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSP 178
SS +S P S ++ S +TSS V T SST T +P
Sbjct: 3351 SSILNSSTPVTSSSVLNSSTPITSSTVVNSSTPITSSTALNTSTP 3395
>SPBC36.11 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 343
Score = 28.3 bits (60), Expect = 1.1
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = -3
Query: 300 GNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTITATDSPS 175
G+ +P++ + SD + SHV + T T ++ ATD PS
Sbjct: 14 GDELPSSYPVFSSDFSYIKPSHVLDVVTVTSTAGPEATDDPS 55
>SPAC823.16c |mug179||WD repeat protein Mug179|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 335
Score = 26.6 bits (56), Expect = 3.4
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +2
Query: 188 VAVIVEDIVHVYNVQTCELVRTLESETPIDGFVGIEFPQNEDYNLY 325
+ V+++ ++VYN++ EL+ TL + G V I F +E+Y Y
Sbjct: 99 LVVLIKGSIYVYNLKNMELINTLNTS---KGNV-IAFAVHENYVAY 140
>SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1396
Score = 26.6 bits (56), Expect = 3.4
Identities = 20/42 (47%), Positives = 24/42 (57%)
Frame = -3
Query: 234 VCTLYTCTISSTITATDSPSGENIGRLSIILLPAFLLRQYFS 109
+ TLY T+ I AT SPS IG SII AF+ QYF+
Sbjct: 1215 IFTLYYTTLGIGI-ATISPS---IGTASIISGTAFVFIQYFN 1252
>SPBC31A8.01c |cwl1|rtn1, SPBC651.13c|reticulon-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 308
Score = 26.6 bits (56), Expect = 3.4
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 176 DGESVAVIVEDIVHVYNVQTCELVRTLESETPI 274
D +++ IV IV ++NV + R L +E+PI
Sbjct: 202 DSKALDRIVNSIVDIFNVMLIQFQRILFAESPI 234
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 25.8 bits (54), Expect = 5.9
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 167 FSPDGESVAVIVEDIVHVYNVQTCELVRTLESET 268
FS DG+ +A V+NV+T +L+ L+ E+
Sbjct: 295 FSADGKFLATGCNRAAMVFNVETGKLITLLQEES 328
>SPBC3H7.01 |spo14|stl1, SPBP16F5.01c|WD repeat protein
Spo14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 395
Score = 25.8 bits (54), Expect = 5.9
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +2
Query: 182 ESVAVIVEDIVHVYNVQTCELVRTLESETPIDGFVGIEFPQNE 310
+ +A+ V+D V +Y+ T ELV+ L G+ F N+
Sbjct: 174 DKLAIAVDDRVEIYDWNTFELVQVLYMPVERATVRGVSFLPNQ 216
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 25.4 bits (53), Expect = 7.8
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = +2
Query: 212 VHVYNVQTCELVRTLESETPIDGFVGIEFPQNEDYNLYGCSKSGLVTIWTWDKG 373
+ ++NV T + V+TLE T G + ++ + + GLV +W+ G
Sbjct: 531 IRIWNVDTQQCVQTLEGHT---GAILKLIYISQGTQVVSAAADGLVKVWSLSSG 581
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,982,524
Number of Sequences: 5004
Number of extensions: 63796
Number of successful extensions: 322
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 322
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 321151040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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