Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte25h18
(695 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0622 - 16293341-16293350,16293783-16294063,16294343-162944... 31 0.66
12_02_1004 + 25202732-25202783,25202997-25203181,25203269-252035... 30 2.0
12_02_0250 - 16432160-16432672,16432751-16433066,16433524-164339... 30 2.0
10_08_0941 - 21717703-21718091,21718454-21718564,21718707-217187... 29 2.7
02_02_0017 - 6131265-6131284,6131654-6131774,6132011-6132146,613... 29 2.7
02_02_0016 - 6118739-6118758,6119116-6119236,6119478-6119613,611... 29 2.7
06_01_0320 - 2320317-2320336,2320791-2320902,2321092-2321236,232... 29 3.5
01_05_0502 + 22771428-22771466,22772327-22772430,22773043-227731... 29 3.5
04_03_0159 - 12091951-12092064,12092779-12092909,12093665-120938... 29 4.7
12_02_0616 - 21246374-21246462,21246605-21247702,21247800-212481... 28 6.2
03_05_1043 - 29898829-29898930,29899174-29899234,29899638-298997... 28 6.2
12_02_1066 + 25785749-25785868,25785953-25786141,25786250-257864... 28 8.1
>05_03_0622 -
16293341-16293350,16293783-16294063,16294343-16294474,
16294561-16294741,16295054-16295096,16295183-16295249,
16296708-16296834,16296985-16297620,16298253-16298761,
16298842-16299157,16299615-16300053,16300128-16300353,
16300441-16300625,16300839-16300950,16301459-16301495,
16301977-16302011,16302497-16302810,16303463-16303475
Length = 1220
Score = 31.5 bits (68), Expect = 0.66
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +2
Query: 80 MVVKVDTANKLKYCLKRKAGRSIIER--RPIFSPDGESVAVIVEDIVHVYNVQTCELVRT 253
M+ + + K K C +R+ G ++ R R F GE+V+ ++H EL+R
Sbjct: 153 MMAMIIRSRKRKRCSRREVGHNLRNRLVRTNFDRSGETVSRYFNKVLHAIGELRDELIRP 212
Query: 254 LESETP 271
+TP
Sbjct: 213 PSLDTP 218
>12_02_1004 +
25202732-25202783,25202997-25203181,25203269-25203509,
25203617-25204022,25204618-25204795,25204875-25205387
Length = 524
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +2
Query: 101 ANKLKYCLKRKAGRSIIER--RPIFSPDGESVAVIVEDIVHVYNVQTCELVRTLESETP 271
+ K K C +R+ G ++ R R F GE+V+ ++H EL+R +TP
Sbjct: 7 SRKRKRCSRREVGHNLRNRLVRTNFDRSGETVSRYFNKVLHAIGELRDELIRPPSLDTP 65
>12_02_0250 -
16432160-16432672,16432751-16433066,16433524-16433962,
16434037-16434277,16434365-16434549,16434763-16434814
Length = 581
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +2
Query: 101 ANKLKYCLKRKAGRSIIER--RPIFSPDGESVAVIVEDIVHVYNVQTCELVRTLESETP 271
+ K K C +R+ G ++ R R F GE+V+ ++H EL+R +TP
Sbjct: 7 SRKRKRCSRREVGHNLRNRLVRTNFDRSGETVSRYFNKVLHAIGELRDELIRPPSLDTP 65
>10_08_0941 -
21717703-21718091,21718454-21718564,21718707-21718791,
21718885-21719106,21719804-21720292,21722206-21722322
Length = 470
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/65 (27%), Positives = 34/65 (52%)
Frame = +2
Query: 167 FSPDGESVAVIVEDIVHVYNVQTCELVRTLESETPIDGFVGIEFPQNEDYNLYGCSKSGL 346
FSPDG +AV V+ + V +V + ++V+ +D +++ + +Y L G K +
Sbjct: 15 FSPDGRYLAVAVDYRLVVRDVVSLKVVQLFSC---VDKISFLDWAPDSEYILCGLYKRPM 71
Query: 347 VTIWT 361
V W+
Sbjct: 72 VQAWS 76
>02_02_0017 -
6131265-6131284,6131654-6131774,6132011-6132146,
6132423-6132529,6133006-6133099,6133199-6133395,
6134401-6134472,6135128-6135304,6135393-6135467,
6135557-6135697,6136439-6136627,6136969-6137034,
6137118-6137268,6137596-6137664,6138751-6138899,
6138969-6139100,6139198-6139523,6139599-6139635,
6139765-6139803,6140196-6140250,6140363-6140424,
6140512-6140532,6140820-6140822
Length = 812
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = +2
Query: 212 VHVYNVQTCELVRTLESETPIDGFVGIEFPQNEDYNLYGCSKSGLVTIWTWDKG 373
+ VYN T + V+ E+ T V + Q + S L+ +W WDKG
Sbjct: 94 IRVYNYNTMDKVKVFEAHTDYIRCVAVHPTQPF---VLSSSDDMLIKLWDWDKG 144
>02_02_0016 -
6118739-6118758,6119116-6119236,6119478-6119613,
6119887-6119993,6120316-6120409,6120509-6120705,
6121872-6121943,6122597-6122773,6122862-6122936,
6123027-6123167,6123837-6124025,6124415-6124480,
6124564-6124714,6125040-6125200,6126279-6126410,
6126508-6126833,6126906-6126942,6127056-6127088,
6127500-6127554,6127666-6127753,6127817-6127862
Length = 807
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = +2
Query: 212 VHVYNVQTCELVRTLESETPIDGFVGIEFPQNEDYNLYGCSKSGLVTIWTWDKG 373
+ VYN T + V+ E+ T V + Q + S L+ +W WDKG
Sbjct: 108 IRVYNYNTMDKVKVFEAHTDYIRCVAVHPTQPF---VLSSSDDMLIKLWDWDKG 158
>06_01_0320 -
2320317-2320336,2320791-2320902,2321092-2321236,
2321353-2321459,2321572-2321665,2321752-2321948,
2322311-2322382,2322504-2322618,2323060-2323176,
2323253-2323344,2323445-2323621,2323746-2323820,
2323911-2324051,2324671-2324859,2325298-2325363,
2325445-2325595,2325718-2325786,2326293-2326441,
2326526-2326657,2326756-2327081,2327167-2327203,
2327926-2327980,2328242-2328309,2328464-2328466
Length = 902
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = +2
Query: 212 VHVYNVQTCELVRTLESETPIDGFVGIEFPQNEDYNLYGCSKSGLVTIWTWDKG 373
+ VYN T + V+ E+ T V + Y L S L+ +W WDKG
Sbjct: 76 IRVYNYNTMDKVKVFEAHTDYIRCVAVH--PTLPYVL-SSSDDMLIKLWDWDKG 126
>01_05_0502 +
22771428-22771466,22772327-22772430,22773043-22773129,
22773212-22773287,22773393-22773467,22773639-22773692,
22773745-22773918,22774002-22774061,22774135-22774251,
22774448-22774542,22774811-22775013,22775177-22775274,
22775451-22775587,22776154-22776219,22776300-22776465,
22776537-22776659,22776763-22776845,22776943-22777084,
22777334-22777363,22777587-22777657,22777742-22778333
Length = 863
Score = 29.1 bits (62), Expect = 3.5
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +1
Query: 607 ICCNL*WNKIIVHSKHLQSEYI 672
ICC + WNK+I+H++ Y+
Sbjct: 172 ICCLVNWNKLIIHTEPFSLRYL 193
>04_03_0159 -
12091951-12092064,12092779-12092909,12093665-12093860,
12094596-12094694,12095062-12095124
Length = 200
Score = 28.7 bits (61), Expect = 4.7
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 5/79 (6%)
Frame = -3
Query: 312 SSFWGNSIPTNPSMGVSDSKVLTSSHVCTLYTCTISSTI-----TATDSPSGENIGRLSI 148
+S G S PT ++ DSK+LTS + +I S S + +IG I
Sbjct: 11 TSVMGRSNPTGVALLFQDSKILTSRSTACILISSIDSMSGMQIKYVAISRTATSIGVREI 70
Query: 147 ILLPAFLLRQYFSLLAVST 91
ILL + QY ++ +T
Sbjct: 71 ILLVRWSPNQYVAISRTAT 89
>12_02_0616 -
21246374-21246462,21246605-21247702,21247800-21248110,
21248550-21249251,21252802-21252912,21253396-21253481,
21253753-21253862,21254085-21254236,21254656-21254765
Length = 922
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = -1
Query: 668 YSDCKCFECTMILFHYRLQQICHRCSNREQPLSKVEYSISE-FRIHKV 528
+S+CKCF ++ + H ++ CS+ + SK S F++H++
Sbjct: 616 HSECKCFTKSVEIIHKNMEHGAEGCSSTAKRDSKSRNGWSSGFQVHQL 663
>03_05_1043 -
29898829-29898930,29899174-29899234,29899638-29899744,
29899839-29899943,29900184-29900270,29900553-29900633,
29900834-29900906,29901120-29901232,29901781-29901874,
29902032-29902087,29902171-29902254,29902550-29902642,
29902751-29902924,29903033-29903146,29903404-29903490
Length = 476
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = -3
Query: 279 PSMGVSDSKVLTS--SHVCTLYTCTISSTITATDSPSGENIGRLSIILLPA 133
PSM +++SK+ S SH C L +C I ++ S G N+ ++L A
Sbjct: 345 PSM-INNSKITDSIISHGCFLDSCRIEHSVVGIRSRIGSNVHLKDTVMLGA 394
>12_02_1066 +
25785749-25785868,25785953-25786141,25786250-25786414,
25786649-25786999,25787924-25788001,25788137-25788277,
25788415-25788459,25788597-25788763,25788833-25788911,
25788985-25789067,25789219-25789348,25789432-25789564,
25789955-25790103,25790339-25790534,25791086-25791288
Length = 742
Score = 27.9 bits (59), Expect = 8.1
Identities = 25/101 (24%), Positives = 41/101 (40%), Gaps = 5/101 (4%)
Frame = +2
Query: 137 GRSIIERRPIFSPDGESVAVIVEDIVHVYNVQTCELVRTLES-ETPIDGFVGIEFPQNED 313
G+S + P FS DG + V V++ T LV LE E + V P
Sbjct: 5 GQSYVSAPPAFSADGRLLLACTGRTVSVFSASTGMLVSELEGHEGDVTAVVVAPPPVAAA 64
Query: 314 YNLYG-CSKSGL---VTIWTWDKGAVLRDTHLQIPANLIVL 424
L C +GL + W + ++R + +P + +V+
Sbjct: 65 AKLASYCWTAGLDGFLVYWDFAAAELVRKVQVGLPVHSMVI 105
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,564,005
Number of Sequences: 37544
Number of extensions: 348160
Number of successful extensions: 880
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 880
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1780264028
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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