Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte25h18
(695 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC040567-1|AAH40567.1| 830|Homo sapiens WD repeat domain 75 pro... 47 7e-05
AK022607-1|BAB14126.1| 773|Homo sapiens protein ( Homo sapiens ... 47 7e-05
AK022581-1|BAB14111.1| 782|Homo sapiens protein ( Homo sapiens ... 47 7e-05
AC013439-1|AAX93081.1| 830|Homo sapiens unknown protein. 47 7e-05
AF327354-1|AAL56014.1| 572|Homo sapiens DMR protein protein. 33 0.97
BC101740-1|AAI01741.1| 433|Homo sapiens zinc finger and SCAN do... 33 1.3
BC101738-1|AAI01739.1| 433|Homo sapiens zinc finger and SCAN do... 33 1.3
BC086311-1|AAH86311.1| 460|Homo sapiens WD repeat domain 8 prot... 33 1.3
BC028387-1|AAH28387.1| 569|Homo sapiens WD repeat domain 20 pro... 33 1.3
BC014297-1|AAH14297.1| 566|Homo sapiens F-box and WD repeat dom... 33 1.3
BC014130-1|AAH14130.1| 566|Homo sapiens F-box and WD repeat dom... 33 1.3
BC002611-1|AAH02611.1| 435|Homo sapiens WDR8 protein protein. 33 1.3
AL807752-3|CAI12743.1| 566|Homo sapiens F-box and WD repeat dom... 33 1.3
AL513320-4|CAI14337.1| 304|Homo sapiens WD repeat domain 8 prot... 33 1.3
AL513320-3|CAI14336.1| 435|Homo sapiens WD repeat domain 8 prot... 33 1.3
AL513320-2|CAI14335.1| 460|Homo sapiens WD repeat domain 8 prot... 33 1.3
AL136528-10|CAI19131.1| 217|Homo sapiens WD repeat domain 8 pro... 33 1.3
AL136528-9|CAI19130.1| 304|Homo sapiens WD repeat domain 8 prot... 33 1.3
AL136528-8|CAI19129.1| 435|Homo sapiens WD repeat domain 8 prot... 33 1.3
AL136528-7|CAI19128.1| 460|Homo sapiens WD repeat domain 8 prot... 33 1.3
AK092424-1|BAC03886.1| 433|Homo sapiens protein ( Homo sapiens ... 33 1.3
AK026081-1|BAB15354.1| 566|Homo sapiens protein ( Homo sapiens ... 33 1.3
AK000437-1|BAA91164.1| 460|Homo sapiens protein ( Homo sapiens ... 33 1.3
AB209148-1|BAD92385.1| 439|Homo sapiens WD repeat domain 20 iso... 33 1.3
AB034912-1|BAA92312.1| 460|Homo sapiens protein ( Homo sapiens ... 33 1.3
AF052432-1|AAC09328.1| 655|Homo sapiens katanin p80 subunit pro... 32 2.2
BC035409-1|AAH35409.1| 808|Homo sapiens transducin (beta)-like ... 31 3.0
Y14153-1|CAA74572.1| 569|Homo sapiens beta-transducin repeats c... 30 6.9
BC027994-1|AAH27994.1| 605|Homo sapiens beta-transducin repeat ... 30 6.9
BC014007-1|AAH14007.1| 808|Homo sapiens TBL3 protein protein. 30 6.9
BC010231-1|AAH10231.1| 808|Homo sapiens transducin (beta)-like ... 30 6.9
AL627424-18|CAI41043.1| 569|Homo sapiens beta-transducin repeat... 30 6.9
AL627424-17|CAI41042.1| 605|Homo sapiens beta-transducin repeat... 30 6.9
AL445463-3|CAI12964.1| 569|Homo sapiens beta-transducin repeat ... 30 6.9
AL445463-2|CAI12963.1| 605|Homo sapiens beta-transducin repeat ... 30 6.9
AL133387-2|CAH70019.1| 569|Homo sapiens beta-transducin repeat ... 30 6.9
AL133387-1|CAH70020.1| 605|Homo sapiens beta-transducin repeat ... 30 6.9
AF129530-1|AAF04464.1| 569|Homo sapiens F-box protein Fbw1A pro... 30 6.9
AF101784-1|AAD08702.1| 605|Homo sapiens b-TRCP variant E3RS-Ika... 30 6.9
AB209173-1|BAD92410.1| 832|Homo sapiens transducin beta-like 3 ... 30 6.9
>BC040567-1|AAH40567.1| 830|Homo sapiens WD repeat domain 75
protein.
Length = 830
Score = 46.8 bits (106), Expect = 7e-05
Identities = 25/86 (29%), Positives = 39/86 (45%)
Frame = +2
Query: 128 RKAGRSIIERRPIFSPDGESVAVIVEDIVHVYNVQTCELVRTLESETPIDGFVGIEFPQN 307
R G + RR +FS D + + + D V VY+ T E V L + GI+ N
Sbjct: 11 RCGGSELNFRRAVFSADSKYIFCVSGDFVKVYSTVTEECVHILHGHRNL--VTGIQLNPN 68
Query: 308 EDYNLYGCSKSGLVTIWTWDKGAVLR 385
LY CS G + +W + G +++
Sbjct: 69 NHLQLYSCSLDGTIKLWDYIDGILIK 94
>AK022607-1|BAB14126.1| 773|Homo sapiens protein ( Homo sapiens
cDNA FLJ12545 fis, clone NT2RM4000611, weakly similar to
VEGETATIBLE INCOMPATIBILITY PROTEIN HET-E-1. ).
Length = 773
Score = 46.8 bits (106), Expect = 7e-05
Identities = 25/86 (29%), Positives = 39/86 (45%)
Frame = +2
Query: 128 RKAGRSIIERRPIFSPDGESVAVIVEDIVHVYNVQTCELVRTLESETPIDGFVGIEFPQN 307
R G + RR +FS D + + + D V VY+ T E V L + GI+ N
Sbjct: 11 RCGGSELNFRRAVFSADSKYIFCVSGDFVKVYSTVTEECVHILHGHRNL--VTGIQLNPN 68
Query: 308 EDYNLYGCSKSGLVTIWTWDKGAVLR 385
LY CS G + +W + G +++
Sbjct: 69 NHLQLYSCSLDGTIKLWDYIDGILIK 94
>AK022581-1|BAB14111.1| 782|Homo sapiens protein ( Homo sapiens
cDNA FLJ12519 fis, clone NT2RM2001813. ).
Length = 782
Score = 46.8 bits (106), Expect = 7e-05
Identities = 25/86 (29%), Positives = 39/86 (45%)
Frame = +2
Query: 128 RKAGRSIIERRPIFSPDGESVAVIVEDIVHVYNVQTCELVRTLESETPIDGFVGIEFPQN 307
R G + RR +FS D + + + D V VY+ T E V L + GI+ N
Sbjct: 11 RCGGSELNFRRAVFSADSKYIFCVSGDFVKVYSTVTEECVHILHGHRNL--VTGIQLNPN 68
Query: 308 EDYNLYGCSKSGLVTIWTWDKGAVLR 385
LY CS G + +W + G +++
Sbjct: 69 NHLQLYSCSLDGTIKLWDYIDGILIK 94
>AC013439-1|AAX93081.1| 830|Homo sapiens unknown protein.
Length = 830
Score = 46.8 bits (106), Expect = 7e-05
Identities = 25/86 (29%), Positives = 39/86 (45%)
Frame = +2
Query: 128 RKAGRSIIERRPIFSPDGESVAVIVEDIVHVYNVQTCELVRTLESETPIDGFVGIEFPQN 307
R G + RR +FS D + + + D V VY+ T E V L + GI+ N
Sbjct: 11 RCGGSELNFRRAVFSADSKYIFCVSGDFVKVYSTVTEECVHILHGHRNL--VTGIQLNPN 68
Query: 308 EDYNLYGCSKSGLVTIWTWDKGAVLR 385
LY CS G + +W + G +++
Sbjct: 69 NHLQLYSCSLDGTIKLWDYIDGILIK 94
>AF327354-1|AAL56014.1| 572|Homo sapiens DMR protein protein.
Length = 572
Score = 33.1 bits (72), Expect = 0.97
Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = +2
Query: 167 FSPDGESVAVIVED-IVHVYNVQTCELVRTLESETPIDGFVGIEFPQNEDYNLYGCSKSG 343
FSPDG+ +A + +D + V+N + EL T++S G + + + + Y + G +
Sbjct: 219 FSPDGKFLACVSQDGFLRVFNFDSVELHGTMKSY--FGGLLCVCWSPDGKYIVTG-GEDD 275
Query: 344 LVTIWTWDKGAVLRDTH 394
LVT+W++ V+ H
Sbjct: 276 LVTVWSFVDCRVIAKGH 292
>BC101740-1|AAI01741.1| 433|Homo sapiens zinc finger and SCAN
domain containing 4 protein.
Length = 433
Score = 32.7 bits (71), Expect = 1.3
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Frame = -1
Query: 656 KCFECTMILFHYRLQQICHRCSNR-EQPL-----SKVEYSISEFRIHKVIHQFLLNMMHN 495
KC EC + F Y + H+ +R E+P K + IS+ R+H++IH +
Sbjct: 313 KCEECPKV-FKYLCHLLAHQRRHRNERPFVCPECQKGFFQISDLRVHQIIHTGKKPFTCS 371
Query: 494 VCFLSMNHQLQL 459
+C S +H+ L
Sbjct: 372 MCKKSFSHKTNL 383
>BC101738-1|AAI01739.1| 433|Homo sapiens zinc finger and SCAN
domain containing 4 protein.
Length = 433
Score = 32.7 bits (71), Expect = 1.3
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Frame = -1
Query: 656 KCFECTMILFHYRLQQICHRCSNR-EQPL-----SKVEYSISEFRIHKVIHQFLLNMMHN 495
KC EC + F Y + H+ +R E+P K + IS+ R+H++IH +
Sbjct: 313 KCEECPKV-FKYLCHLLAHQRRHRNERPFVCPECQKGFFQISDLRVHQIIHTGKKPFTCS 371
Query: 494 VCFLSMNHQLQL 459
+C S +H+ L
Sbjct: 372 MCKKSFSHKTNL 383
>BC086311-1|AAH86311.1| 460|Homo sapiens WD repeat domain 8
protein.
Length = 460
Score = 32.7 bits (71), Expect = 1.3
Identities = 21/68 (30%), Positives = 37/68 (54%)
Frame = +2
Query: 167 FSPDGESVAVIVEDIVHVYNVQTCELVRTLESETPIDGFVGIEFPQNEDYNLYGCSKSGL 346
FSPDG+ +A V+ + V +V T ++ L+ T +D IE+ + + L K GL
Sbjct: 16 FSPDGKYLASCVQYRLVVRDVNTLQI---LQLYTCLDQIQHIEWSADSLFILCAMYKRGL 72
Query: 347 VTIWTWDK 370
V +W+ ++
Sbjct: 73 VQVWSLEQ 80
>BC028387-1|AAH28387.1| 569|Homo sapiens WD repeat domain 20
protein.
Length = 569
Score = 32.7 bits (71), Expect = 1.3
Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = +2
Query: 167 FSPDGESVAVIVED-IVHVYNVQTCELVRTLESETPIDGFVGIEFPQNEDYNLYGCSKSG 343
FSPDG+ +A + +D + V+N + EL T++S G + + + + Y + G +
Sbjct: 228 FSPDGKFLACVSQDGFLRVFNFDSVELHGTMKSY--FGGLLCVCWSPDGKYIVTG-GEDD 284
Query: 344 LVTIWTWDKGAVLRDTH 394
LVT+W++ V+ H
Sbjct: 285 LVTVWSFVDCRVIARGH 301
>BC014297-1|AAH14297.1| 566|Homo sapiens F-box and WD repeat domain
containing 5 protein.
Length = 566
Score = 32.7 bits (71), Expect = 1.3
Identities = 23/90 (25%), Positives = 37/90 (41%)
Frame = +2
Query: 203 EDIVHVYNVQTCELVRTLESETPIDGFVGIEFPQNEDYNLYGCSKSGLVTIWTWDKGAVL 382
E+ +Y+ C V+TL T D + + F + Y CSK V IW+ D L
Sbjct: 71 EEFQRLYDTVPCVEVQTLREHT--DQVLHLSF-SHSGYQFASCSKDCTVKIWSNDLTISL 127
Query: 383 RDTHLQIPANLIVLTFDLINENECFITGAG 472
+ P N F N+++ + +G
Sbjct: 128 LHSADMRPYNWSYTQFSQFNKDDSLLLASG 157
>BC014130-1|AAH14130.1| 566|Homo sapiens F-box and WD repeat domain
containing 5 protein.
Length = 566
Score = 32.7 bits (71), Expect = 1.3
Identities = 23/90 (25%), Positives = 37/90 (41%)
Frame = +2
Query: 203 EDIVHVYNVQTCELVRTLESETPIDGFVGIEFPQNEDYNLYGCSKSGLVTIWTWDKGAVL 382
E+ +Y+ C V+TL T D + + F + Y CSK V IW+ D L
Sbjct: 71 EEFQRLYDTVPCVEVQTLREHT--DQVLHLSF-SHSGYQFASCSKDCTVKIWSNDLTISL 127
Query: 383 RDTHLQIPANLIVLTFDLINENECFITGAG 472
+ P N F N+++ + +G
Sbjct: 128 LHSADMRPYNWSYTQFSQFNKDDSLLLASG 157
>BC002611-1|AAH02611.1| 435|Homo sapiens WDR8 protein protein.
Length = 435
Score = 32.7 bits (71), Expect = 1.3
Identities = 21/68 (30%), Positives = 37/68 (54%)
Frame = +2
Query: 167 FSPDGESVAVIVEDIVHVYNVQTCELVRTLESETPIDGFVGIEFPQNEDYNLYGCSKSGL 346
FSPDG+ +A V+ + V +V T ++ L+ T +D IE+ + + L K GL
Sbjct: 16 FSPDGKYLASCVQYRLVVRDVNTLQI---LQLYTCLDQIQHIEWSADSLFILCAMYKRGL 72
Query: 347 VTIWTWDK 370
V +W+ ++
Sbjct: 73 VQVWSLEQ 80
>AL807752-3|CAI12743.1| 566|Homo sapiens F-box and WD repeat domain
containing 5 protein.
Length = 566
Score = 32.7 bits (71), Expect = 1.3
Identities = 23/90 (25%), Positives = 37/90 (41%)
Frame = +2
Query: 203 EDIVHVYNVQTCELVRTLESETPIDGFVGIEFPQNEDYNLYGCSKSGLVTIWTWDKGAVL 382
E+ +Y+ C V+TL T D + + F + Y CSK V IW+ D L
Sbjct: 71 EEFQRLYDTVPCVEVQTLREHT--DQVLHLSF-SHSGYQFASCSKDCTVKIWSNDLTISL 127
Query: 383 RDTHLQIPANLIVLTFDLINENECFITGAG 472
+ P N F N+++ + +G
Sbjct: 128 LHSADMRPYNWSYTQFSQFNKDDSLLLASG 157
>AL513320-4|CAI14337.1| 304|Homo sapiens WD repeat domain 8
protein.
Length = 304
Score = 32.7 bits (71), Expect = 1.3
Identities = 21/68 (30%), Positives = 37/68 (54%)
Frame = +2
Query: 167 FSPDGESVAVIVEDIVHVYNVQTCELVRTLESETPIDGFVGIEFPQNEDYNLYGCSKSGL 346
FSPDG+ +A V+ + V +V T ++ L+ T +D IE+ + + L K GL
Sbjct: 16 FSPDGKYLASCVQYRLVVRDVNTLQI---LQLYTCLDQIQHIEWSADSLFILCAMYKRGL 72
Query: 347 VTIWTWDK 370
V +W+ ++
Sbjct: 73 VQVWSLEQ 80
>AL513320-3|CAI14336.1| 435|Homo sapiens WD repeat domain 8
protein.
Length = 435
Score = 32.7 bits (71), Expect = 1.3
Identities = 21/68 (30%), Positives = 37/68 (54%)
Frame = +2
Query: 167 FSPDGESVAVIVEDIVHVYNVQTCELVRTLESETPIDGFVGIEFPQNEDYNLYGCSKSGL 346
FSPDG+ +A V+ + V +V T ++ L+ T +D IE+ + + L K GL
Sbjct: 16 FSPDGKYLASCVQYRLVVRDVNTLQI---LQLYTCLDQIQHIEWSADSLFILCAMYKRGL 72
Query: 347 VTIWTWDK 370
V +W+ ++
Sbjct: 73 VQVWSLEQ 80
>AL513320-2|CAI14335.1| 460|Homo sapiens WD repeat domain 8
protein.
Length = 460
Score = 32.7 bits (71), Expect = 1.3
Identities = 21/68 (30%), Positives = 37/68 (54%)
Frame = +2
Query: 167 FSPDGESVAVIVEDIVHVYNVQTCELVRTLESETPIDGFVGIEFPQNEDYNLYGCSKSGL 346
FSPDG+ +A V+ + V +V T ++ L+ T +D IE+ + + L K GL
Sbjct: 16 FSPDGKYLASCVQYRLVVRDVNTLQI---LQLYTCLDQIQHIEWSADSLFILCAMYKRGL 72
Query: 347 VTIWTWDK 370
V +W+ ++
Sbjct: 73 VQVWSLEQ 80
>AL136528-10|CAI19131.1| 217|Homo sapiens WD repeat domain 8
protein.
Length = 217
Score = 32.7 bits (71), Expect = 1.3
Identities = 21/68 (30%), Positives = 37/68 (54%)
Frame = +2
Query: 167 FSPDGESVAVIVEDIVHVYNVQTCELVRTLESETPIDGFVGIEFPQNEDYNLYGCSKSGL 346
FSPDG+ +A V+ + V +V T ++ L+ T +D IE+ + + L K GL
Sbjct: 16 FSPDGKYLASCVQYRLVVRDVNTLQI---LQLYTCLDQIQHIEWSADSLFILCAMYKRGL 72
Query: 347 VTIWTWDK 370
V +W+ ++
Sbjct: 73 VQVWSLEQ 80
>AL136528-9|CAI19130.1| 304|Homo sapiens WD repeat domain 8
protein.
Length = 304
Score = 32.7 bits (71), Expect = 1.3
Identities = 21/68 (30%), Positives = 37/68 (54%)
Frame = +2
Query: 167 FSPDGESVAVIVEDIVHVYNVQTCELVRTLESETPIDGFVGIEFPQNEDYNLYGCSKSGL 346
FSPDG+ +A V+ + V +V T ++ L+ T +D IE+ + + L K GL
Sbjct: 16 FSPDGKYLASCVQYRLVVRDVNTLQI---LQLYTCLDQIQHIEWSADSLFILCAMYKRGL 72
Query: 347 VTIWTWDK 370
V +W+ ++
Sbjct: 73 VQVWSLEQ 80
>AL136528-8|CAI19129.1| 435|Homo sapiens WD repeat domain 8
protein.
Length = 435
Score = 32.7 bits (71), Expect = 1.3
Identities = 21/68 (30%), Positives = 37/68 (54%)
Frame = +2
Query: 167 FSPDGESVAVIVEDIVHVYNVQTCELVRTLESETPIDGFVGIEFPQNEDYNLYGCSKSGL 346
FSPDG+ +A V+ + V +V T ++ L+ T +D IE+ + + L K GL
Sbjct: 16 FSPDGKYLASCVQYRLVVRDVNTLQI---LQLYTCLDQIQHIEWSADSLFILCAMYKRGL 72
Query: 347 VTIWTWDK 370
V +W+ ++
Sbjct: 73 VQVWSLEQ 80
>AL136528-7|CAI19128.1| 460|Homo sapiens WD repeat domain 8
protein.
Length = 460
Score = 32.7 bits (71), Expect = 1.3
Identities = 21/68 (30%), Positives = 37/68 (54%)
Frame = +2
Query: 167 FSPDGESVAVIVEDIVHVYNVQTCELVRTLESETPIDGFVGIEFPQNEDYNLYGCSKSGL 346
FSPDG+ +A V+ + V +V T ++ L+ T +D IE+ + + L K GL
Sbjct: 16 FSPDGKYLASCVQYRLVVRDVNTLQI---LQLYTCLDQIQHIEWSADSLFILCAMYKRGL 72
Query: 347 VTIWTWDK 370
V +W+ ++
Sbjct: 73 VQVWSLEQ 80
>AK092424-1|BAC03886.1| 433|Homo sapiens protein ( Homo sapiens
cDNA FLJ35105 fis, clone PLACE6006697, weakly similar to
ZINC FINGER PROTEIN 191. ).
Length = 433
Score = 32.7 bits (71), Expect = 1.3
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Frame = -1
Query: 656 KCFECTMILFHYRLQQICHRCSNR-EQPL-----SKVEYSISEFRIHKVIHQFLLNMMHN 495
KC EC + F Y + H+ +R E+P K + IS+ R+H++IH +
Sbjct: 313 KCEECPKV-FKYLCHLLAHQRRHRNERPFVCPECQKGFFQISDLRVHQIIHTGKKPFTCS 371
Query: 494 VCFLSMNHQLQL 459
+C S +H+ L
Sbjct: 372 MCKKSFSHKTNL 383
>AK026081-1|BAB15354.1| 566|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22428 fis, clone HRC09055. ).
Length = 566
Score = 32.7 bits (71), Expect = 1.3
Identities = 23/90 (25%), Positives = 37/90 (41%)
Frame = +2
Query: 203 EDIVHVYNVQTCELVRTLESETPIDGFVGIEFPQNEDYNLYGCSKSGLVTIWTWDKGAVL 382
E+ +Y+ C V+TL T D + + F + Y CSK V IW+ D L
Sbjct: 71 EEFQRLYDTVPCVEVQTLREHT--DQVLHLSF-SHSGYQFASCSKDCTVKIWSNDLTISL 127
Query: 383 RDTHLQIPANLIVLTFDLINENECFITGAG 472
+ P N F N+++ + +G
Sbjct: 128 LHSADMRPYNWSYTQFSQFNKDDSLLLASG 157
>AK000437-1|BAA91164.1| 460|Homo sapiens protein ( Homo sapiens
cDNA FLJ20430 fis, clone KAT03672. ).
Length = 460
Score = 32.7 bits (71), Expect = 1.3
Identities = 21/68 (30%), Positives = 37/68 (54%)
Frame = +2
Query: 167 FSPDGESVAVIVEDIVHVYNVQTCELVRTLESETPIDGFVGIEFPQNEDYNLYGCSKSGL 346
FSPDG+ +A V+ + V +V T ++ L+ T +D IE+ + + L K GL
Sbjct: 16 FSPDGKYLASCVQYRLVVRDVNTLQI---LQLYTCLDQIQHIEWSADSLFILCAMYKRGL 72
Query: 347 VTIWTWDK 370
V +W+ ++
Sbjct: 73 VQVWSLEQ 80
>AB209148-1|BAD92385.1| 439|Homo sapiens WD repeat domain 20
isoform 4 variant protein.
Length = 439
Score = 32.7 bits (71), Expect = 1.3
Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = +2
Query: 167 FSPDGESVAVIVED-IVHVYNVQTCELVRTLESETPIDGFVGIEFPQNEDYNLYGCSKSG 343
FSPDG+ +A + +D + V+N + EL T++S G + + + + Y + G +
Sbjct: 98 FSPDGKFLACVSQDGFLRVFNFDSVELHGTMKSY--FGGLLCVCWSPDGKYIVTG-GEDD 154
Query: 344 LVTIWTWDKGAVLRDTH 394
LVT+W++ V+ H
Sbjct: 155 LVTVWSFVDCRVIARGH 171
>AB034912-1|BAA92312.1| 460|Homo sapiens protein ( Homo sapiens
mRNA, complete cds, WD-repeat like sequence. ).
Length = 460
Score = 32.7 bits (71), Expect = 1.3
Identities = 21/68 (30%), Positives = 37/68 (54%)
Frame = +2
Query: 167 FSPDGESVAVIVEDIVHVYNVQTCELVRTLESETPIDGFVGIEFPQNEDYNLYGCSKSGL 346
FSPDG+ +A V+ + V +V T ++ L+ T +D IE+ + + L K GL
Sbjct: 16 FSPDGKYLASCVQYRLVVRDVNTLQI---LQLYTCLDQIQHIEWSADSLFILCAMYKRGL 72
Query: 347 VTIWTWDK 370
V +W+ ++
Sbjct: 73 VQVWSLEQ 80
>AF052432-1|AAC09328.1| 655|Homo sapiens katanin p80 subunit
protein.
Length = 655
Score = 31.9 bits (69), Expect = 2.2
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Frame = +2
Query: 113 KYCLKRKAGRSIIERRPIFSPDGESVAVIVED-IVHVYNVQTCELVRTLESET-PIDGFV 286
K C+ R G S R FSPDG+ +A +D V ++++ +++ T P++
Sbjct: 137 KGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVN--- 193
Query: 287 GIEFPQNEDYNLYGCSKSGLVTIWTWDKGAVL 382
+EF NE Y L S G + W +K V+
Sbjct: 194 VVEFHPNE-YLLASGSSDGTIRFWDLEKFQVV 224
>BC035409-1|AAH35409.1| 808|Homo sapiens transducin (beta)-like 3
protein.
Length = 808
Score = 31.5 bits (68), Expect = 3.0
Identities = 26/109 (23%), Positives = 46/109 (42%)
Frame = +2
Query: 107 KLKYCLKRKAGRSIIERRPIFSPDGESVAVIVEDIVHVYNVQTCELVRTLESETPIDGFV 286
K Y ++RK + G+ + + V++ V + ++R+LE E D
Sbjct: 12 KTNYAVERKIEPFYKGGKAQLDQTGQHLFCVCGTRVNILEVASGAVLRSLEQEDQEDITA 71
Query: 287 GIEFPQNEDYNLYGCSKSGLVTIWTWDKGAVLRDTHLQIPANLIVLTFD 433
P NE L S++ L+ W W +G+V R + A + + FD
Sbjct: 72 FDLSPDNEV--LVTASRALLLAQWAWQEGSVTRLSKAIHTAPVATMAFD 118
>Y14153-1|CAA74572.1| 569|Homo sapiens beta-transducin repeats
containing protein protein.
Length = 569
Score = 30.3 bits (65), Expect = 6.9
Identities = 19/58 (32%), Positives = 25/58 (43%)
Frame = +2
Query: 212 VHVYNVQTCELVRTLESETPIDGFVGIEFPQNEDYNLYGCSKSGLVTIWTWDKGAVLR 385
+ V+N TCE VRTL GI Q D + S + +W + GA LR
Sbjct: 412 IKVWNTSTCEFVRTLNGHKR-----GIACLQYRDRLVVSGSSDNTIRLWDIECGACLR 464
>BC027994-1|AAH27994.1| 605|Homo sapiens beta-transducin repeat
containing protein.
Length = 605
Score = 30.3 bits (65), Expect = 6.9
Identities = 19/58 (32%), Positives = 25/58 (43%)
Frame = +2
Query: 212 VHVYNVQTCELVRTLESETPIDGFVGIEFPQNEDYNLYGCSKSGLVTIWTWDKGAVLR 385
+ V+N TCE VRTL GI Q D + S + +W + GA LR
Sbjct: 448 IKVWNTSTCEFVRTLNGHKR-----GIACLQYRDRLVVSGSSDNTIRLWDIECGACLR 500
>BC014007-1|AAH14007.1| 808|Homo sapiens TBL3 protein protein.
Length = 808
Score = 30.3 bits (65), Expect = 6.9
Identities = 26/109 (23%), Positives = 45/109 (41%)
Frame = +2
Query: 107 KLKYCLKRKAGRSIIERRPIFSPDGESVAVIVEDIVHVYNVQTCELVRTLESETPIDGFV 286
K Y ++RK + G+ + + V++ V + ++R+LE E D
Sbjct: 12 KTNYAVERKIEPFYKGGKAQLDQTGQHLFCVCGTRVNILEVASGAVLRSLEQEDQEDITA 71
Query: 287 GIEFPQNEDYNLYGCSKSGLVTIWTWDKGAVLRDTHLQIPANLIVLTFD 433
P NE L S++ L+ W W +G+V R A + + FD
Sbjct: 72 FDLSPDNEV--LVTASRALLLAQWAWQEGSVTRLWKAIHTAPVATMAFD 118
>BC010231-1|AAH10231.1| 808|Homo sapiens transducin (beta)-like 3
protein.
Length = 808
Score = 30.3 bits (65), Expect = 6.9
Identities = 26/109 (23%), Positives = 45/109 (41%)
Frame = +2
Query: 107 KLKYCLKRKAGRSIIERRPIFSPDGESVAVIVEDIVHVYNVQTCELVRTLESETPIDGFV 286
K Y ++RK + G+ + + V++ V + ++R+LE E D
Sbjct: 12 KTNYAVERKIEPFYKGGKAQLDQTGQHLFCVCGTRVNILEVASGAVLRSLEQEDQEDITA 71
Query: 287 GIEFPQNEDYNLYGCSKSGLVTIWTWDKGAVLRDTHLQIPANLIVLTFD 433
P NE L S++ L+ W W +G+V R A + + FD
Sbjct: 72 FDLSPDNEV--LVTASRALLLAQWAWQEGSVTRLWKAIHTAPVATMAFD 118
>AL627424-18|CAI41043.1| 569|Homo sapiens beta-transducin repeat
containing protein.
Length = 569
Score = 30.3 bits (65), Expect = 6.9
Identities = 19/58 (32%), Positives = 25/58 (43%)
Frame = +2
Query: 212 VHVYNVQTCELVRTLESETPIDGFVGIEFPQNEDYNLYGCSKSGLVTIWTWDKGAVLR 385
+ V+N TCE VRTL GI Q D + S + +W + GA LR
Sbjct: 412 IKVWNTSTCEFVRTLNGHKR-----GIACLQYRDRLVVSGSSDNTIRLWDIECGACLR 464
>AL627424-17|CAI41042.1| 605|Homo sapiens beta-transducin repeat
containing protein.
Length = 605
Score = 30.3 bits (65), Expect = 6.9
Identities = 19/58 (32%), Positives = 25/58 (43%)
Frame = +2
Query: 212 VHVYNVQTCELVRTLESETPIDGFVGIEFPQNEDYNLYGCSKSGLVTIWTWDKGAVLR 385
+ V+N TCE VRTL GI Q D + S + +W + GA LR
Sbjct: 448 IKVWNTSTCEFVRTLNGHKR-----GIACLQYRDRLVVSGSSDNTIRLWDIECGACLR 500
>AL445463-3|CAI12964.1| 569|Homo sapiens beta-transducin repeat
containing protein.
Length = 569
Score = 30.3 bits (65), Expect = 6.9
Identities = 19/58 (32%), Positives = 25/58 (43%)
Frame = +2
Query: 212 VHVYNVQTCELVRTLESETPIDGFVGIEFPQNEDYNLYGCSKSGLVTIWTWDKGAVLR 385
+ V+N TCE VRTL GI Q D + S + +W + GA LR
Sbjct: 412 IKVWNTSTCEFVRTLNGHKR-----GIACLQYRDRLVVSGSSDNTIRLWDIECGACLR 464
>AL445463-2|CAI12963.1| 605|Homo sapiens beta-transducin repeat
containing protein.
Length = 605
Score = 30.3 bits (65), Expect = 6.9
Identities = 19/58 (32%), Positives = 25/58 (43%)
Frame = +2
Query: 212 VHVYNVQTCELVRTLESETPIDGFVGIEFPQNEDYNLYGCSKSGLVTIWTWDKGAVLR 385
+ V+N TCE VRTL GI Q D + S + +W + GA LR
Sbjct: 448 IKVWNTSTCEFVRTLNGHKR-----GIACLQYRDRLVVSGSSDNTIRLWDIECGACLR 500
>AL133387-2|CAH70019.1| 569|Homo sapiens beta-transducin repeat
containing protein.
Length = 569
Score = 30.3 bits (65), Expect = 6.9
Identities = 19/58 (32%), Positives = 25/58 (43%)
Frame = +2
Query: 212 VHVYNVQTCELVRTLESETPIDGFVGIEFPQNEDYNLYGCSKSGLVTIWTWDKGAVLR 385
+ V+N TCE VRTL GI Q D + S + +W + GA LR
Sbjct: 412 IKVWNTSTCEFVRTLNGHKR-----GIACLQYRDRLVVSGSSDNTIRLWDIECGACLR 464
>AL133387-1|CAH70020.1| 605|Homo sapiens beta-transducin repeat
containing protein.
Length = 605
Score = 30.3 bits (65), Expect = 6.9
Identities = 19/58 (32%), Positives = 25/58 (43%)
Frame = +2
Query: 212 VHVYNVQTCELVRTLESETPIDGFVGIEFPQNEDYNLYGCSKSGLVTIWTWDKGAVLR 385
+ V+N TCE VRTL GI Q D + S + +W + GA LR
Sbjct: 448 IKVWNTSTCEFVRTLNGHKR-----GIACLQYRDRLVVSGSSDNTIRLWDIECGACLR 500
>AF129530-1|AAF04464.1| 569|Homo sapiens F-box protein Fbw1A
protein.
Length = 569
Score = 30.3 bits (65), Expect = 6.9
Identities = 19/58 (32%), Positives = 25/58 (43%)
Frame = +2
Query: 212 VHVYNVQTCELVRTLESETPIDGFVGIEFPQNEDYNLYGCSKSGLVTIWTWDKGAVLR 385
+ V+N TCE VRTL GI Q D + S + +W + GA LR
Sbjct: 412 IKVWNTSTCEFVRTLNGHKR-----GIACLQYRDRLVVSGSSDNTIRLWDIECGACLR 464
>AF101784-1|AAD08702.1| 605|Homo sapiens b-TRCP variant
E3RS-IkappaB protein.
Length = 605
Score = 30.3 bits (65), Expect = 6.9
Identities = 19/58 (32%), Positives = 25/58 (43%)
Frame = +2
Query: 212 VHVYNVQTCELVRTLESETPIDGFVGIEFPQNEDYNLYGCSKSGLVTIWTWDKGAVLR 385
+ V+N TCE VRTL GI Q D + S + +W + GA LR
Sbjct: 448 IKVWNTSTCEFVRTLNGHKR-----GIACLQYRDRLVVSGSSDNTIRLWDIECGACLR 500
>AB209173-1|BAD92410.1| 832|Homo sapiens transducin beta-like 3
variant protein.
Length = 832
Score = 30.3 bits (65), Expect = 6.9
Identities = 26/109 (23%), Positives = 45/109 (41%)
Frame = +2
Query: 107 KLKYCLKRKAGRSIIERRPIFSPDGESVAVIVEDIVHVYNVQTCELVRTLESETPIDGFV 286
K Y ++RK + G+ + + V++ V + ++R+LE E D
Sbjct: 36 KTNYAVERKIEPFYKGGKAQLDQTGQHLFCVCGTRVNILEVASGAVLRSLEQEDQEDITA 95
Query: 287 GIEFPQNEDYNLYGCSKSGLVTIWTWDKGAVLRDTHLQIPANLIVLTFD 433
P NE L S++ L+ W W +G+V R A + + FD
Sbjct: 96 FDLSPDNEV--LVTASRALLLAQWAWQEGSVTRLWKAIHTAPVATMAFD 142
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,129,907
Number of Sequences: 237096
Number of extensions: 2151974
Number of successful extensions: 4250
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 3965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4223
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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