Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25h18
         (695 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061381-1|AAL28929.1| 1071|Drosophila melanogaster LD30416p pro...    63   3e-10
AE014134-3335|AAF53958.1|  982|Drosophila melanogaster CG12050-P...    63   3e-10
AE013599-154|AAF57279.1|  224|Drosophila melanogaster CG14589-PA...    31   1.1  
AY051929-1|AAK93353.1|  509|Drosophila melanogaster LD41216p pro...    31   2.0  
AE014297-2605|AAF55614.2|  509|Drosophila melanogaster CG5451-PA...    31   2.0  
AE014296-1683|AAZ66068.1|  179|Drosophila melanogaster CG33702-P...    30   3.5  

>AY061381-1|AAL28929.1| 1071|Drosophila melanogaster LD30416p
           protein.
          Length = 1071

 Score = 63.3 bits (147), Expect = 3e-10
 Identities = 43/158 (27%), Positives = 69/158 (43%), Gaps = 6/158 (3%)
 Frame = +2

Query: 134 AGRSIIERRPIFSPDGESVAVIVEDIVHVYNVQTCELVRTLESETPIDGFVGIEFPQNED 313
           AG +I+E  P+FSPDG  + V     V VY   T EL R L+  T     + +E    + 
Sbjct: 15  AGGNIVEHAPVFSPDGRFMFVRCLTKVQVYATSTGELTRVLDDATA--PLISLELDLKQP 72

Query: 314 YNLYGCSKSGLVTIWTWDKGAVLRDTHLQIPANLIVLTFDLIN-----ENECFITGAGGS 478
             L GC+ +G +  W W  G + +   L +     +LT  L++     +  C    A G 
Sbjct: 73  DLLIGCTSTGELVRWNWRAGVLKKTVSLTLGPGDTILTCHLMDLYKGGDTACAFVTAKGK 132

Query: 479 YSKNIHYASYSIKTGELL-CEYGTRIWNTQPLIKVALG 589
             + + +   +  TGE +    G ++    PL+ V  G
Sbjct: 133 AGEQVKWFVVNTSTGEKIDVNCGLKLKLRVPLVDVGKG 170


>AE014134-3335|AAF53958.1|  982|Drosophila melanogaster CG12050-PA
           protein.
          Length = 982

 Score = 63.3 bits (147), Expect = 3e-10
 Identities = 43/158 (27%), Positives = 69/158 (43%), Gaps = 6/158 (3%)
 Frame = +2

Query: 134 AGRSIIERRPIFSPDGESVAVIVEDIVHVYNVQTCELVRTLESETPIDGFVGIEFPQNED 313
           AG +I+E  P+FSPDG  + V     V VY   T EL R L+  T     + +E    + 
Sbjct: 15  AGGNIVEHAPVFSPDGRFMFVRCLTKVQVYATSTGELTRVLDDATA--PLISLELDLKQP 72

Query: 314 YNLYGCSKSGLVTIWTWDKGAVLRDTHLQIPANLIVLTFDLIN-----ENECFITGAGGS 478
             L GC+ +G +  W W  G + +   L +     +LT  L++     +  C    A G 
Sbjct: 73  DLLIGCTSTGELVRWNWRAGVLKKTVSLTLGPGDTILTCHLMDLYKGGDTACAFVTAKGK 132

Query: 479 YSKNIHYASYSIKTGELL-CEYGTRIWNTQPLIKVALG 589
             + + +   +  TGE +    G ++    PL+ V  G
Sbjct: 133 AGEQVKWFVVNTSTGEKIDVNCGLKLKLRVPLVDVGKG 170


>AE013599-154|AAF57279.1|  224|Drosophila melanogaster CG14589-PA
           protein.
          Length = 224

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
 Frame = -1

Query: 587 REQPLS--KVEYSISEFRIHKVIHQFLLNMMHNVCFLSMNHQLQL*NIHFHLLNQM 426
           RE+ LS  ++   + ++ IH +   ++L++MH          + + N HFHL  QM
Sbjct: 96  REKNLSMERLMVDLRDYNIHLISENYMLSVMHEQKPRPAEPNIYITNSHFHLTRQM 151


>AY051929-1|AAK93353.1|  509|Drosophila melanogaster LD41216p
           protein.
          Length = 509

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
 Frame = +2

Query: 122 LKRKAGRSIIERRPIFSPDGESVAVIVED-IVHVYNVQTCELVRT---LESETPIDGFVG 289
           LK   G S       F+PDG SV     D  V V++++T E V T   L +E  ++    
Sbjct: 342 LKEFKGHSSFVNEATFTPDGHSVLSASSDGTVKVWSLKTTECVATYKPLGNELAVN--TV 399

Query: 290 IEFPQNEDYNLYGCSKSGLVTIWTWDKGAVLR 385
           +  P+N ++ +  C++S  V I    +G ++R
Sbjct: 400 LILPKNPEHFIV-CNRSNTVVIMNM-QGQIVR 429


>AE014297-2605|AAF55614.2|  509|Drosophila melanogaster CG5451-PA
           protein.
          Length = 509

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
 Frame = +2

Query: 122 LKRKAGRSIIERRPIFSPDGESVAVIVED-IVHVYNVQTCELVRT---LESETPIDGFVG 289
           LK   G S       F+PDG SV     D  V V++++T E V T   L +E  ++    
Sbjct: 342 LKEFKGHSSFVNEATFTPDGHSVLSASSDGTVKVWSLKTTECVATYKPLGNELAVN--TV 399

Query: 290 IEFPQNEDYNLYGCSKSGLVTIWTWDKGAVLR 385
           +  P+N ++ +  C++S  V I    +G ++R
Sbjct: 400 LILPKNPEHFIV-CNRSNTVVIMNM-QGQIVR 429


>AE014296-1683|AAZ66068.1|  179|Drosophila melanogaster CG33702-PA
           protein.
          Length = 179

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = -1

Query: 602 HRCSNREQPLSKVEYSISEFRIHKVIHQFLLNMMHNVCF 486
           H      QP++K+E+++S FR   +   FL+N   + C+
Sbjct: 59  HIAIKYSQPINKIEFNLSIFRKSNMYRLFLVNHTIDFCY 97


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,767,751
Number of Sequences: 53049
Number of extensions: 651135
Number of successful extensions: 1532
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1530
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3046624548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)