Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte25h13
(692 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29536-5|AAA68794.1| 246|Caenorhabditis elegans Hypothetical pr... 220 7e-58
Z83316-9|CAN99655.1| 250|Caenorhabditis elegans Hypothetical pr... 81 1e-15
Z83316-6|CAD30429.2| 491|Caenorhabditis elegans Hypothetical pr... 81 1e-15
Z83316-5|CAD30428.2| 345|Caenorhabditis elegans Hypothetical pr... 81 1e-15
AC006780-5|AAF60646.1| 287|Caenorhabditis elegans Hypothetical ... 66 2e-11
AC006780-4|AAO21411.1| 312|Caenorhabditis elegans Hypothetical ... 66 2e-11
Z81532-3|CAC70088.2| 659|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z73098-12|CAA97339.1| 452|Caenorhabditis elegans Hypothetical p... 36 0.036
AF003151-1|AAK18921.2| 1184|Caenorhabditis elegans Hypothetical ... 29 2.4
Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z82261-7|CAH60757.2| 300|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z68106-9|CAE17838.1| 551|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z49207-10|CAE17907.1| 551|Caenorhabditis elegans Hypothetical p... 27 9.6
>U29536-5|AAA68794.1| 246|Caenorhabditis elegans Hypothetical
protein F45E12.1 protein.
Length = 246
Score = 220 bits (538), Expect = 7e-58
Identities = 100/145 (68%), Positives = 120/145 (82%), Gaps = 1/145 (0%)
Frame = +2
Query: 221 FKKQYRALAQYQSVKYEI-YPLSPVSRHRLSLVRRKILVLDLDETLIHSHHDAMVRPTVK 397
F+K RA +YQ VKY P+SP++ HRL V+RKILVLDLDETLIHSHHD ++R TVK
Sbjct: 23 FRKTSRAYCKYQVVKYHSNIPMSPLTTHRLLTVKRKILVLDLDETLIHSHHDGVLRQTVK 82
Query: 398 PGTPPDFVLKVTIDKHPVRFFVHKRPHVDYFLDIVSQWYELVVFTASMEIYGAAVADKLD 577
PGTP DF ++V ID+HPV+F VH+RPHVDYFL +VSQWYELVVFTASME+YG +VAD+LD
Sbjct: 83 PGTPSDFTIRVVIDRHPVKFSVHERPHVDYFLSVVSQWYELVVFTASMEVYGTSVADRLD 142
Query: 578 NGRGILRRRFYRQHCTAEHGSSYTK 652
GRGIL+RR++RQHCT E G YTK
Sbjct: 143 RGRGILKRRYFRQHCTMEVG-GYTK 166
>Z83316-9|CAN99655.1| 250|Caenorhabditis elegans Hypothetical
protein B0379.4c protein.
Length = 250
Score = 80.6 bits (190), Expect = 1e-15
Identities = 48/111 (43%), Positives = 65/111 (58%)
Frame = +2
Query: 320 RKILVLDLDETLIHSHHDAMVRPTVKPGTPPDFVLKVTIDKHPVRFFVHKRPHVDYFLDI 499
+K LV+DLDETL+HS + KP PDFV+ V ID + +V KRP+VD FL
Sbjct: 70 KKCLVIDLDETLVHS--------SFKPVKNPDFVIPVEIDGVEHQVYVLKRPYVDEFLAK 121
Query: 500 VSQWYELVVFTASMEIYGAAVADKLDNGRGILRRRFYRQHCTAEHGSSYTK 652
V + +E ++FTAS+ Y VAD LD R + R R +R+ C H +Y K
Sbjct: 122 VGEHFECILFTASLAKYADPVADLLDKKR-VFRGRLFREACVF-HKGNYVK 170
>Z83316-6|CAD30429.2| 491|Caenorhabditis elegans Hypothetical
protein B0379.4b protein.
Length = 491
Score = 80.6 bits (190), Expect = 1e-15
Identities = 48/111 (43%), Positives = 65/111 (58%)
Frame = +2
Query: 320 RKILVLDLDETLIHSHHDAMVRPTVKPGTPPDFVLKVTIDKHPVRFFVHKRPHVDYFLDI 499
+K LV+DLDETL+HS + KP PDFV+ V ID + +V KRP+VD FL
Sbjct: 311 KKCLVIDLDETLVHS--------SFKPVKNPDFVIPVEIDGVEHQVYVLKRPYVDEFLAK 362
Query: 500 VSQWYELVVFTASMEIYGAAVADKLDNGRGILRRRFYRQHCTAEHGSSYTK 652
V + +E ++FTAS+ Y VAD LD R + R R +R+ C H +Y K
Sbjct: 363 VGEHFECILFTASLAKYADPVADLLDKKR-VFRGRLFREACVF-HKGNYVK 411
>Z83316-5|CAD30428.2| 345|Caenorhabditis elegans Hypothetical
protein B0379.4a protein.
Length = 345
Score = 80.6 bits (190), Expect = 1e-15
Identities = 48/111 (43%), Positives = 65/111 (58%)
Frame = +2
Query: 320 RKILVLDLDETLIHSHHDAMVRPTVKPGTPPDFVLKVTIDKHPVRFFVHKRPHVDYFLDI 499
+K LV+DLDETL+HS + KP PDFV+ V ID + +V KRP+VD FL
Sbjct: 165 KKCLVIDLDETLVHS--------SFKPVKNPDFVIPVEIDGVEHQVYVLKRPYVDEFLAK 216
Query: 500 VSQWYELVVFTASMEIYGAAVADKLDNGRGILRRRFYRQHCTAEHGSSYTK 652
V + +E ++FTAS+ Y VAD LD R + R R +R+ C H +Y K
Sbjct: 217 VGEHFECILFTASLAKYADPVADLLDKKR-VFRGRLFREACVF-HKGNYVK 265
>AC006780-5|AAF60646.1| 287|Caenorhabditis elegans Hypothetical
protein Y47D9A.2a protein.
Length = 287
Score = 66.1 bits (154), Expect = 2e-11
Identities = 37/112 (33%), Positives = 58/112 (51%)
Frame = +2
Query: 329 LVLDLDETLIHSHHDAMVRPTVKPGTPPDFVLKVTIDKHPVRFFVHKRPHVDYFLDIVSQ 508
LVLDLDETL+H ++ P V V + +V RPH+ FL +++
Sbjct: 67 LVLDLDETLVHC--------SLTPLDNATMVFPVVFQNITYQVYVRLRPHLRTFLSRMAK 118
Query: 509 WYELVVFTASMEIYGAAVADKLDNGRGILRRRFYRQHCTAEHGSSYTKKSVI 664
+E+++FTAS ++Y + D LD + +R R +R+HC G +Y K I
Sbjct: 119 TFEIIIFTASKKVYANKLCDILDPRKNHIRHRLFREHCVCVFG-NYVKDLTI 169
>AC006780-4|AAO21411.1| 312|Caenorhabditis elegans Hypothetical
protein Y47D9A.2b protein.
Length = 312
Score = 66.1 bits (154), Expect = 2e-11
Identities = 37/112 (33%), Positives = 58/112 (51%)
Frame = +2
Query: 329 LVLDLDETLIHSHHDAMVRPTVKPGTPPDFVLKVTIDKHPVRFFVHKRPHVDYFLDIVSQ 508
LVLDLDETL+H ++ P V V + +V RPH+ FL +++
Sbjct: 67 LVLDLDETLVHC--------SLTPLDNATMVFPVVFQNITYQVYVRLRPHLRTFLSRMAK 118
Query: 509 WYELVVFTASMEIYGAAVADKLDNGRGILRRRFYRQHCTAEHGSSYTKKSVI 664
+E+++FTAS ++Y + D LD + +R R +R+HC G +Y K I
Sbjct: 119 TFEIIIFTASKKVYANKLCDILDPRKNHIRHRLFREHCVCVFG-NYVKDLTI 169
>Z81532-3|CAC70088.2| 659|Caenorhabditis elegans Hypothetical
protein F36F2.6 protein.
Length = 659
Score = 40.7 bits (91), Expect = 0.001
Identities = 28/96 (29%), Positives = 45/96 (46%)
Frame = +2
Query: 317 RRKILVLDLDETLIHSHHDAMVRPTVKPGTPPDFVLKVTIDKHPVRFFVHKRPHVDYFLD 496
R+ +L++DLD+T+IH+ M TV D + K + H + RPH FL+
Sbjct: 142 RKLVLLVDLDQTIIHTSDKPM---TVDTENHKD-ITKYNL--HSRVYTTKLRPHTTEFLN 195
Query: 497 IVSQWYELVVFTASMEIYGAAVADKLDNGRGILRRR 604
+S YE+ + T Y +A LD + +R
Sbjct: 196 KMSNMYEMHIVTYGQRQYAHRIAQILDPDARLFEQR 231
>Z73098-12|CAA97339.1| 452|Caenorhabditis elegans Hypothetical
protein T21C9.12 protein.
Length = 452
Score = 35.5 bits (78), Expect = 0.036
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +2
Query: 467 KRPHVDYFLDIVS-QWYELVVFTASMEIYGAAVADKLDNGRGILRRRFYRQHCTAEHGSS 643
KRP +DYFLD++ +E+V++++ + A V D D + I+ + F + CT
Sbjct: 273 KRPALDYFLDVIGYPNFEVVIYSSESMMTAAPVVDSFDPKQRIMYKLF--RDCTKYMNGH 330
Query: 644 YTK 652
+ K
Sbjct: 331 HVK 333
>AF003151-1|AAK18921.2| 1184|Caenorhabditis elegans Hypothetical
protein D1007.15 protein.
Length = 1184
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +2
Query: 137 IPMLKRLQMGLRAFMLVASKVWSCICYMFKKQYRALAQYQSVKYEIYPLS 286
IPM KRL+ ++ F L S C+ ++ + LA + KY PL+
Sbjct: 567 IPMSKRLKSSVKDFYLRHSMTGHCLAVSYRPCFSKLATSLAGKYVEVPLN 616
>Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = -2
Query: 454 SNWMFVD-SDFQDKVRRRTRLNSGPDH 377
+N+ +V+ SDF DK + R+N GP H
Sbjct: 81 ANYAYVNRSDFDDKQIKHVRVNPGPAH 107
>Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = -2
Query: 454 SNWMFVD-SDFQDKVRRRTRLNSGPDH 377
+N+ +V+ SDF DK + R+N GP H
Sbjct: 81 ANYAYVNRSDFDDKQIKHVRVNPGPAH 107
>Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical
protein H15N14.2b protein.
Length = 758
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = -2
Query: 454 SNWMFVD-SDFQDKVRRRTRLNSGPDH 377
+N+ +V+ SDF DK + R+N GP H
Sbjct: 15 ANYAYVNRSDFDDKQIKHVRVNPGPAH 41
>Z82261-7|CAH60757.2| 300|Caenorhabditis elegans Hypothetical
protein C35D6.10 protein.
Length = 300
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +2
Query: 452 RFFVHKRP--HVDYFLDIVSQWYELVVFTASME 544
RFF+ K + YFL I+SQ + +VVF ++E
Sbjct: 86 RFFIFKYLTFSICYFLFIISQTFNIVVFLVAVE 118
>Z68106-9|CAE17838.1| 551|Caenorhabditis elegans Hypothetical
protein F41E7.9 protein.
Length = 551
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = -2
Query: 541 HRRSKHNQLIPL*NYIQKVVYMRPLMNKKSNWMFVDSDFQDKVRRRTRLNSGPDHR 374
H S+H+Q +Y + +RPL N +++ F +S Q + R R DH+
Sbjct: 392 HEYSQHSQNDSYDSYPESEEPIRPLQNMRNSNSFSESSQQRPISRPIRNQPRYDHQ 447
>Z49207-10|CAE17907.1| 551|Caenorhabditis elegans Hypothetical
protein F41E7.9 protein.
Length = 551
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = -2
Query: 541 HRRSKHNQLIPL*NYIQKVVYMRPLMNKKSNWMFVDSDFQDKVRRRTRLNSGPDHR 374
H S+H+Q +Y + +RPL N +++ F +S Q + R R DH+
Sbjct: 392 HEYSQHSQNDSYDSYPESEEPIRPLQNMRNSNSFSESSQQRPISRPIRNQPRYDHQ 447
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,902,519
Number of Sequences: 27780
Number of extensions: 326106
Number of successful extensions: 751
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 744
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -