Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte25h12
(704 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL117200-11|CAD54172.1| 530|Caenorhabditis elegans Hypothetical... 35 0.049
Z81579-8|CAN86617.1| 930|Caenorhabditis elegans Hypothetical pr... 35 0.065
Z81579-7|CAB61019.1| 927|Caenorhabditis elegans Hypothetical pr... 35 0.065
AL117200-14|CAJ85779.1| 465|Caenorhabditis elegans Hypothetical... 35 0.065
AL117200-12|CAB60583.1| 461|Caenorhabditis elegans Hypothetical... 35 0.065
AF016852-1|AAB94551.1| 927|Caenorhabditis elegans HMP-1 protein. 35 0.065
U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interactin... 31 0.80
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 30 1.9
Z83115-2|CAE17889.1| 373|Caenorhabditis elegans Hypothetical pr... 29 3.2
U50308-3|AAW88404.1| 1392|Caenorhabditis elegans Gut granule los... 29 3.2
Z70038-8|CAA93887.2| 618|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z68319-6|CAA92704.2| 618|Caenorhabditis elegans Hypothetical pr... 29 4.3
AY220985-1|AAO65265.1| 618|Caenorhabditis elegans putative RNA ... 29 4.3
Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z68760-10|CAL49442.1| 1427|Caenorhabditis elegans Hypothetical p... 28 7.5
Z68760-8|CAA92996.1| 1398|Caenorhabditis elegans Hypothetical pr... 28 7.5
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 28 7.5
U39993-2|AAK72059.1| 744|Caenorhabditis elegans Hypothetical pr... 28 7.5
AY081955-1|AAL92523.1| 788|Caenorhabditis elegans MAT-1 protein. 28 7.5
AL021448-1|CAA16276.2| 898|Caenorhabditis elegans Hypothetical ... 28 7.5
AF233290-1|AAF62516.1| 898|Caenorhabditis elegans maternal-effe... 28 7.5
AC006708-13|AAF60415.1| 788|Caenorhabditis elegans Metaphase-to... 28 7.5
Z67881-3|CAD44099.1| 1405|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z50797-11|CAA90676.2| 1405|Caenorhabditis elegans Hypothetical p... 27 9.9
AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein. 27 9.9
AL161712-8|CAC70133.1| 340|Caenorhabditis elegans Hypothetical ... 27 9.9
AL110485-2|CAE45741.1| 1021|Caenorhabditis elegans Hypothetical ... 27 9.9
AL110485-1|CAB60374.3| 1085|Caenorhabditis elegans Hypothetical ... 27 9.9
AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (droso... 27 9.9
AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (droso... 27 9.9
AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (droso... 27 9.9
AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (droso... 27 9.9
AF067947-8|AAC19225.1| 343|Caenorhabditis elegans Kinetochore n... 27 9.9
AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein. 27 9.9
>AL117200-11|CAD54172.1| 530|Caenorhabditis elegans Hypothetical
protein Y50E8A.4a protein.
Length = 530
Score = 35.1 bits (77), Expect = 0.049
Identities = 18/63 (28%), Positives = 31/63 (49%)
Frame = -1
Query: 692 LQTVQLSHSETDLHVVRIQQRLKRRHLHAESFRARHLKLQSLPQAAHLVPPPAPGRHQHE 513
LQTV ++H + + ++ + + F ++ + LP H PPP P HQ++
Sbjct: 39 LQTVVVTHENPYVTMTSQSSKMDIPVILPKRFNMSDIEHKHLPP--HQPPPPVPHHHQNQ 96
Query: 512 PTH 504
PTH
Sbjct: 97 PTH 99
>Z81579-8|CAN86617.1| 930|Caenorhabditis elegans Hypothetical
protein R13H4.4b protein.
Length = 930
Score = 34.7 bits (76), Expect = 0.065
Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 3/154 (1%)
Frame = +3
Query: 249 LTPVNKFTAKKPESSVNLARIKSCLDEYRKQGRPPKIGHKAASMEDLTPTKRSKIENLNA 428
LT V KF S+++ I +DE R+ ++DL S+IE L+
Sbjct: 127 LTAVAKFLILA--DSIDVKVIVDKVDEVRETAHQMIEADTKIKVDDLYNLLISQIEELDI 184
Query: 429 TKKDKEVHLVRPALR-GIVEERAAARVGRFMLVTAWRR--RRDEVRCLRKTLEFQVSCSE 599
T + + + LV+P R ++ R+A R +L T+ R R E R+ ++ ++
Sbjct: 185 TVRRRAIDLVKPNQRDDLLAARSALRQTAPLLYTSTRTFVRHPEHEEARRNRDY---TAD 241
Query: 600 RLRMQVSALKSLLDSDNVKVRLAMRELDRLKQLL 701
+ ++AL+S+L+ KV + E R+ L+
Sbjct: 242 EMHSALNALESVLNGQQPKVTFS--EYGRIGDLI 273
>Z81579-7|CAB61019.1| 927|Caenorhabditis elegans Hypothetical
protein R13H4.4a protein.
Length = 927
Score = 34.7 bits (76), Expect = 0.065
Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 3/154 (1%)
Frame = +3
Query: 249 LTPVNKFTAKKPESSVNLARIKSCLDEYRKQGRPPKIGHKAASMEDLTPTKRSKIENLNA 428
LT V KF S+++ I +DE R+ ++DL S+IE L+
Sbjct: 127 LTAVAKFLILA--DSIDVKVIVDKVDEVRETAHQMIEADTKIKVDDLYNLLISQIEELDI 184
Query: 429 TKKDKEVHLVRPALR-GIVEERAAARVGRFMLVTAWRR--RRDEVRCLRKTLEFQVSCSE 599
T + + + LV+P R ++ R+A R +L T+ R R E R+ ++ ++
Sbjct: 185 TVRRRAIDLVKPNQRDDLLAARSALRQTAPLLYTSTRTFVRHPEHEEARRNRDY---TAD 241
Query: 600 RLRMQVSALKSLLDSDNVKVRLAMRELDRLKQLL 701
+ ++AL+S+L+ KV + E R+ L+
Sbjct: 242 EMHSALNALESVLNGQQPKVTFS--EYGRIGDLI 273
>AL117200-14|CAJ85779.1| 465|Caenorhabditis elegans Hypothetical
protein Y50E8A.4c protein.
Length = 465
Score = 34.7 bits (76), Expect = 0.065
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = -1
Query: 581 KLQSLPQAAHLVPPPAPGRHQHEPTH 504
KLQ LP H PPP P HQ++PTH
Sbjct: 7 KLQHLPP--HQPPPPVPHHHQNQPTH 30
>AL117200-12|CAB60583.1| 461|Caenorhabditis elegans Hypothetical
protein Y50E8A.4b protein.
Length = 461
Score = 34.7 bits (76), Expect = 0.065
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = -1
Query: 581 KLQSLPQAAHLVPPPAPGRHQHEPTH 504
KLQ LP H PPP P HQ++PTH
Sbjct: 7 KLQHLPP--HQPPPPVPHHHQNQPTH 30
>AF016852-1|AAB94551.1| 927|Caenorhabditis elegans HMP-1 protein.
Length = 927
Score = 34.7 bits (76), Expect = 0.065
Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 3/154 (1%)
Frame = +3
Query: 249 LTPVNKFTAKKPESSVNLARIKSCLDEYRKQGRPPKIGHKAASMEDLTPTKRSKIENLNA 428
LT V KF S+++ I +DE R+ ++DL S+IE L+
Sbjct: 127 LTAVAKFLILA--DSIDVKVIVDKVDEVRETAHQMIEADTKIKVDDLYNLLISQIEELDI 184
Query: 429 TKKDKEVHLVRPALR-GIVEERAAARVGRFMLVTAWRR--RRDEVRCLRKTLEFQVSCSE 599
T + + + LV+P R ++ R+A R +L T+ R R E R+ ++ ++
Sbjct: 185 TVRRRAIDLVKPNQRDDLLAARSALRQTAPLLYTSTRTFVRHPEHEEARRNRDY---TAD 241
Query: 600 RLRMQVSALKSLLDSDNVKVRLAMRELDRLKQLL 701
+ ++AL+S+L+ KV + E R+ L+
Sbjct: 242 EMHSALNALESVLNGQQPKVTFS--EYGRIGDLI 273
>U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interacting
protein protein16, isoform d protein.
Length = 1030
Score = 31.1 bits (67), Expect = 0.80
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = -1
Query: 659 DLHVVRIQQRLKRRHLHAESFRARHLKLQSLPQAAHL---VPPPAPGRHQHEPTHPGR 495
D H+ + +R H+ + S+ ++Q PQ H PPP QH+P HP +
Sbjct: 72 DFHLAKYSERRASYHVESSSYIHSSQQIQHPPQQHHPPPPSPPPVAETIQHQP-HPSQ 128
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 29.9 bits (64), Expect = 1.9
Identities = 25/139 (17%), Positives = 60/139 (43%)
Frame = +3
Query: 84 EKMPENSPKMARSASPVARAGAGDISERELFRERHNLQTTPPARLQRLHPKKQLFLTPVN 263
+K +S + S+S + + + SE E E+H+ + L++ H K + + +
Sbjct: 155 KKAESSSSSSSSSSSSSSSSSSSSSSESE--DEKHHHKKHAKKHLKKHHKKAESSSSSSS 212
Query: 264 KFTAKKPESSVNLARIKSCLDEYRKQGRPPKIGHKAASMEDLTPTKRSKIENLNATKKDK 443
++ SS + + +S +++ + K HK A + + S + ++++ +K
Sbjct: 213 SSSSSSSSSSSSSSSSESEDEKHHHKKHAVKKHHKKAESSSSSSSSSSSSSSSSSSEDEK 272
Query: 444 EVHLVRPALRGIVEERAAA 500
H A + + + AA
Sbjct: 273 HHHKKHAAKKHVKHHKKAA 291
>Z83115-2|CAE17889.1| 373|Caenorhabditis elegans Hypothetical
protein K11D2.5 protein.
Length = 373
Score = 29.1 bits (62), Expect = 3.2
Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = +3
Query: 246 FLTPVNKFT---AKKPESSVNLARIKSCLDEYRKQGRPPKIGHKAASMEDLTPTKRSKIE 416
FL KF AK+P+ + +++S LD +++ K+ +ME+ K +++
Sbjct: 274 FLLATGKFATPDAKRPQIRIENPKLQSILDS-KEEDFAVKVAR--VTMEEWIVFKALRVK 330
Query: 417 NLNATKKDKEVHLVRPALRGIVEERAAAR 503
KK+++ ++P+ R E R R
Sbjct: 331 ETINEKKERKFERIKPSKRKAYERRHKER 359
>U50308-3|AAW88404.1| 1392|Caenorhabditis elegans Gut granule loss
protein 4 protein.
Length = 1392
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = -1
Query: 638 QQRLKRRHLHAESFRARHLKLQSLPQAAHLVPPPAPGRHQHEP 510
QQR++ ++A+S R+ S+ A +PPPAP QH P
Sbjct: 731 QQRMEMPQMNAKSKRS-----DSVTNGAPTLPPPAPKPEQHLP 768
>Z70038-8|CAA93887.2| 618|Caenorhabditis elegans Hypothetical
protein ZK1067.6 protein.
Length = 618
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -1
Query: 626 KRRHLHAESFRARHLKLQSLPQAAHLVPPPAP 531
K+R++ A L L L H VPPPAP
Sbjct: 462 KKRYIEVFQASAEELNLHHLVGQQHQVPPPAP 493
>Z68319-6|CAA92704.2| 618|Caenorhabditis elegans Hypothetical
protein ZK1067.6 protein.
Length = 618
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -1
Query: 626 KRRHLHAESFRARHLKLQSLPQAAHLVPPPAP 531
K+R++ A L L L H VPPPAP
Sbjct: 462 KKRYIEVFQASAEELNLHHLVGQQHQVPPPAP 493
>AY220985-1|AAO65265.1| 618|Caenorhabditis elegans putative RNA
binding protein SYM-2 protein.
Length = 618
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -1
Query: 626 KRRHLHAESFRARHLKLQSLPQAAHLVPPPAP 531
K+R++ A L L L H VPPPAP
Sbjct: 462 KKRYIEVFQASAEELNLHHLVGQQHQVPPPAP 493
>Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical
protein E01G6.1 protein.
Length = 1391
Score = 27.9 bits (59), Expect = 7.5
Identities = 21/63 (33%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Frame = -3
Query: 504 PGPRRAPRLYHVALALLNEPPCLSLLRSSFQFCFFSWVSNLPSRQPCVRSL--EVALACD 331
P PRR A L N PC L SS Q C + V + P C R + + C
Sbjct: 640 PMPRRPFEPDSFADLLSNISPCPPQLFSSGQSCTVNQVGDCPKNHICFRDIGFKQGSCCR 699
Query: 330 THP 322
T P
Sbjct: 700 TTP 702
>Z68760-10|CAL49442.1| 1427|Caenorhabditis elegans Hypothetical
protein F36H1.2c protein.
Length = 1427
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = -2
Query: 682 SSSLIARRTFTLSESNRDLSADTCMRSRSEHDT*NSKV-FLKQRTSSRR 539
+SS R ++ S R +S MR ++DT SK+ F Q+T RR
Sbjct: 1359 TSSDFVRSSYRTSSRYRRMSRGDLMRGMHQNDTIRSKINFQNQQTVQRR 1407
>Z68760-8|CAA92996.1| 1398|Caenorhabditis elegans Hypothetical protein
F36H1.2a protein.
Length = 1398
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = -2
Query: 682 SSSLIARRTFTLSESNRDLSADTCMRSRSEHDT*NSKV-FLKQRTSSRR 539
+SS R ++ S R +S MR ++DT SK+ F Q+T RR
Sbjct: 1330 TSSDFVRSSYRTSSRYRRMSRGDLMRGMHQNDTIRSKINFQNQQTVQRR 1378
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Frame = -1
Query: 575 QSLPQAAHLVPPP--APGRHQHEPTHPG 498
Q P H VPP AP QH P HPG
Sbjct: 62 QQHPPQHHSVPPNSFAPPPGQHHPQHPG 89
>U39993-2|AAK72059.1| 744|Caenorhabditis elegans Hypothetical
protein F47E1.2 protein.
Length = 744
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 288 SSVNLARIKSCLDEYRKQGRPPKIG 362
S +NL + ++EY+ GRPPKIG
Sbjct: 144 SLINLEDDTTPIEEYQPIGRPPKIG 168
>AY081955-1|AAL92523.1| 788|Caenorhabditis elegans MAT-1 protein.
Length = 788
Score = 27.9 bits (59), Expect = 7.5
Identities = 35/158 (22%), Positives = 60/158 (37%), Gaps = 12/158 (7%)
Frame = +3
Query: 114 ARSASPVARAGAGDISE--RELFRERHNL---QTTPPARLQRLHPKKQLFLTPVNKFTAK 278
+R S V R+ G I+ RE N+ Q+TP + R++P + +++ T +
Sbjct: 230 SRLESSVRRSTRGTIASANRETRNTTSNITPRQSTPGSTPSRINPTAPRKSSRISEMTTR 289
Query: 279 KPESSVNLARIKSCLDEYRKQGRPPKIGHKAASMEDLTPTKRSKIEN-------LNATKK 437
+ ESSV +R + R R A+ + T+ S N + T+
Sbjct: 290 RTESSVTGSRSSLFTEPERPHTRATHSSRNRANAALNSDTENSNASNTRTRSGIASVTRG 349
Query: 438 DKEVHLVRPALRGIVEERAAARVGRFMLVTAWRRRRDE 551
P I AAA + + RRR ++
Sbjct: 350 SSSSQRTNPVRTSIRIADAAAAANKTAKTLSQRRRNEK 387
>AL021448-1|CAA16276.2| 898|Caenorhabditis elegans Hypothetical
protein Y2H9A.1 protein.
Length = 898
Score = 27.9 bits (59), Expect = 7.5
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = -2
Query: 271 VNLFTGVKKSCFLGCKR*SRAGGVVCKLC 185
V + + +K C +GC++ S + ++CK C
Sbjct: 297 VTMKSHIKACCVIGCEKSSNSKTIMCKTC 325
>AF233290-1|AAF62516.1| 898|Caenorhabditis elegans maternal-effect
sterile 4 protein.
Length = 898
Score = 27.9 bits (59), Expect = 7.5
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = -2
Query: 271 VNLFTGVKKSCFLGCKR*SRAGGVVCKLC 185
V + + +K C +GC++ S + ++CK C
Sbjct: 297 VTMKSHIKACCVIGCEKSSNSKTIMCKTC 325
>AC006708-13|AAF60415.1| 788|Caenorhabditis elegans
Metaphase-to-anaphase transitiondefect protein 1,
isoform a protein.
Length = 788
Score = 27.9 bits (59), Expect = 7.5
Identities = 35/158 (22%), Positives = 60/158 (37%), Gaps = 12/158 (7%)
Frame = +3
Query: 114 ARSASPVARAGAGDISE--RELFRERHNL---QTTPPARLQRLHPKKQLFLTPVNKFTAK 278
+R S V R+ G I+ RE N+ Q+TP + R++P + +++ T +
Sbjct: 230 SRLESSVRRSTRGTIASANRETRNTTSNITPRQSTPGSTPSRINPTAPRKSSRISEMTTR 289
Query: 279 KPESSVNLARIKSCLDEYRKQGRPPKIGHKAASMEDLTPTKRSKIEN-------LNATKK 437
+ ESSV +R + R R A+ + T+ S N + T+
Sbjct: 290 RTESSVTGSRSSLFTEPERPHTRATHSSRNRANAALNSDTENSNASNTRTRSGIASVTRG 349
Query: 438 DKEVHLVRPALRGIVEERAAARVGRFMLVTAWRRRRDE 551
P I AAA + + RRR ++
Sbjct: 350 SSSSQRTNPVRTSIRIADAAAAANKTAKTLSQRRRNEK 387
>Z67881-3|CAD44099.1| 1405|Caenorhabditis elegans Hypothetical
protein T22H6.6a protein.
Length = 1405
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -1
Query: 593 ARHLKLQSLPQAAHLVPPPAPGRHQHEPTHPGRGALL-DYTT*RWPY*MNLLVF 435
+RHL L+S P H + +PG + + HP L T R P +N VF
Sbjct: 487 SRHLSLKSKPPHGHHMERGSPGSSKSDIFHPEPTVFLPSSTASRVPTTVNTAVF 540
>Z50797-11|CAA90676.2| 1405|Caenorhabditis elegans Hypothetical
protein T22H6.6a protein.
Length = 1405
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -1
Query: 593 ARHLKLQSLPQAAHLVPPPAPGRHQHEPTHPGRGALL-DYTT*RWPY*MNLLVF 435
+RHL L+S P H + +PG + + HP L T R P +N VF
Sbjct: 487 SRHLSLKSKPPHGHHMERGSPGSSKSDIFHPEPTVFLPSSTASRVPTTVNTAVF 540
>AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein.
Length = 4250
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -2
Query: 121 LLAILGLFSGIFSCKNSFKISLFGRSVSQCDV 26
+LA+ G SG+++CK +S FG + + C V
Sbjct: 1549 ILALYGEDSGVYTCK---AVSAFGEAATSCTV 1577
>AL161712-8|CAC70133.1| 340|Caenorhabditis elegans Hypothetical
protein Y66D12A.11 protein.
Length = 340
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = -1
Query: 689 QTVQLSHSETDLHVVRIQQRLKRRHLHAESFRARHLKLQSLPQAAHLVPPPAP 531
QTV E +VV +++ KRRH ++S + R + P+A + PP P
Sbjct: 101 QTVCEQGEEAARNVVLEEKKHKRRHHKSQSNKKR--RHHGAPRARSMTSPPPP 151
>AL110485-2|CAE45741.1| 1021|Caenorhabditis elegans Hypothetical
protein Y46G5A.1b protein.
Length = 1021
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = -1
Query: 626 KRRHLHAESFRARHLKLQSLPQAAHLVPPPAPGRHQHEPT---HPGR 495
+RRH H S +++ + S + + PP P H H+PT HP R
Sbjct: 90 ERRHHHQTSSPSQYPRPPSRDRESQ-PPPTQPRHHHHQPTVIHHPIR 135
>AL110485-1|CAB60374.3| 1085|Caenorhabditis elegans Hypothetical
protein Y46G5A.1a protein.
Length = 1085
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = -1
Query: 626 KRRHLHAESFRARHLKLQSLPQAAHLVPPPAPGRHQHEPT---HPGR 495
+RRH H S +++ + S + + PP P H H+PT HP R
Sbjct: 90 ERRHHHQTSSPSQYPRPPSRDRESQ-PPPTQPRHHHHQPTVIHHPIR 135
>AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform b protein.
Length = 4203
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -2
Query: 121 LLAILGLFSGIFSCKNSFKISLFGRSVSQCDV 26
+LA+ G SG+++CK +S FG + + C V
Sbjct: 1466 ILALYGEDSGVYTCK---AVSAFGEAATSCTV 1494
>AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform a protein.
Length = 4488
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -2
Query: 121 LLAILGLFSGIFSCKNSFKISLFGRSVSQCDV 26
+LA+ G SG+++CK +S FG + + C V
Sbjct: 1787 ILALYGEDSGVYTCK---AVSAFGEAATSCTV 1815
>AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform d protein.
Length = 4369
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -2
Query: 121 LLAILGLFSGIFSCKNSFKISLFGRSVSQCDV 26
+LA+ G SG+++CK +S FG + + C V
Sbjct: 1787 ILALYGEDSGVYTCK---AVSAFGEAATSCTV 1815
>AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform c protein.
Length = 4447
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -2
Query: 121 LLAILGLFSGIFSCKNSFKISLFGRSVSQCDV 26
+LA+ G SG+++CK +S FG + + C V
Sbjct: 1787 ILALYGEDSGVYTCK---AVSAFGEAATSCTV 1815
>AF067947-8|AAC19225.1| 343|Caenorhabditis elegans Kinetochore null
protein 3 protein.
Length = 343
Score = 27.5 bits (58), Expect = 9.9
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +3
Query: 270 TAKKPESSVNL-ARIK-SCLDEYRKQGRPPKIGHKAASMEDLTPTKRSKIENLNATKKDK 443
T +K ES ++ AR+ S LD+ + G + +ED K+E+LN K++K
Sbjct: 241 TLRKEESPNDIVARLHGSFLDKTQDAGNVNTAQKENQQLEDERGMLEEKLESLNKIKREK 300
Query: 444 EVHLVRPALRGIVEERAAAR 503
+ L + +R EE A R
Sbjct: 301 DEFLAK--MRKEEEEALARR 318
>AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein.
Length = 4219
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -2
Query: 121 LLAILGLFSGIFSCKNSFKISLFGRSVSQCDV 26
+LA+ G SG+++CK +S FG + + C V
Sbjct: 1482 ILALYGEDSGVYTCK---AVSAFGEAATSCTV 1510
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,715,517
Number of Sequences: 27780
Number of extensions: 327302
Number of successful extensions: 1342
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1337
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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