Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25h03
         (717 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF172329-1|AAF02618.1| 3579|Drosophila melanogaster starry night...    30   2.7  
AE013599-1158|AAF58763.4| 3574|Drosophila melanogaster CG11895-P...    30   2.7  
AB028498-1|BAA84069.1| 3575|Drosophila melanogaster Flamingo pro...    30   2.7  
BT015313-1|AAT94541.1| 1220|Drosophila melanogaster AT02057p pro...    29   6.3  
AE014297-958|AAN13430.1| 1133|Drosophila melanogaster CG8176-PA,...    29   6.3  
M63450-1|AAA29051.1| 3005|Drosophila melanogaster zinc-finger ho...    29   8.4  
AE014135-89|AAF59339.2| 3005|Drosophila melanogaster CG1449-PA p...    29   8.4  

>AF172329-1|AAF02618.1| 3579|Drosophila melanogaster starry night
            protein protein.
          Length = 3579

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
 Frame = -3

Query: 625  VSSLVLMTSMLAACDIKDSIL----VKDVI*TTENSLNACRIAWVFLFAASVEHSSQSFL 458
            V+ L+L  S+ AA  +KD +L    ++ ++  +  SL    + WV    A+ EHS    L
Sbjct: 2973 VNLLILFVSVKAAFTLKDHVLGFGNLRTLLWLSVVSLPLMGVMWVLAVLAASEHSQLLSL 3032

Query: 457  HLASIASFH 431
             L+ +   H
Sbjct: 3033 LLSGVVLLH 3041


>AE013599-1158|AAF58763.4| 3574|Drosophila melanogaster CG11895-PA
            protein.
          Length = 3574

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
 Frame = -3

Query: 625  VSSLVLMTSMLAACDIKDSIL----VKDVI*TTENSLNACRIAWVFLFAASVEHSSQSFL 458
            V+ L+L  S+ AA  +KD +L    ++ ++  +  SL    + WV    A+ EHS    L
Sbjct: 2973 VNLLILFVSVKAAFTLKDHVLGFGNLRTLLWLSVVSLPLMGVMWVLAVLAASEHSQLLSL 3032

Query: 457  HLASIASFH 431
             L+ +   H
Sbjct: 3033 LLSGVVLLH 3041


>AB028498-1|BAA84069.1| 3575|Drosophila melanogaster Flamingo protein.
          Length = 3575

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
 Frame = -3

Query: 625  VSSLVLMTSMLAACDIKDSIL----VKDVI*TTENSLNACRIAWVFLFAASVEHSSQSFL 458
            V+ L+L  S+ AA  +KD +L    ++ ++  +  SL    + WV    A+ EHS    L
Sbjct: 2974 VNLLILFVSVKAAFTLKDHVLGFGNLRTLLWLSVVSLPLMGVMWVLAVLAASEHSQLLSL 3033

Query: 457  HLASIASFH 431
             L+ +   H
Sbjct: 3034 LLSGVVLLH 3042


>BT015313-1|AAT94541.1| 1220|Drosophila melanogaster AT02057p
           protein.
          Length = 1220

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 22/96 (22%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
 Frame = +3

Query: 378 HMEMEREKDRILHDNDVKWKEAIDAKCKKLWEECS-TEAANRNTQAIRQAFKEFSVVYMT 554
           H++M ++   ++ D   K+ + +  K K + EE S T    +  Q    A ++   +Y +
Sbjct: 84  HLQMVQKLTELVKDV-AKYADELHKKHKSVKEEESQTLECVQAIQTSTVAVQKLRDLYAS 142

Query: 555 SLTRIESLMSHAANIEVMRTSEETFKKMKNKYKALV 662
            +  +E L     + +     E   KK++ +YKAL+
Sbjct: 143 KVQELEKLRKDNGSHKDAEKLESKLKKLQEEYKALL 178


>AE014297-958|AAN13430.1| 1133|Drosophila melanogaster CG8176-PA,
           isoform A protein.
          Length = 1133

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 22/96 (22%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
 Frame = +3

Query: 378 HMEMEREKDRILHDNDVKWKEAIDAKCKKLWEECS-TEAANRNTQAIRQAFKEFSVVYMT 554
           H++M ++   ++ D   K+ + +  K K + EE S T    +  Q    A ++   +Y +
Sbjct: 84  HLQMVQKLTELVKDV-AKYADELHKKHKSVKEEESQTLECVQAIQTSTVAVQKLRDLYAS 142

Query: 555 SLTRIESLMSHAANIEVMRTSEETFKKMKNKYKALV 662
            +  +E L     + +     E   KK++ +YKAL+
Sbjct: 143 KVQELEKLRKDNGSHKDAEKLESKLKKLQEEYKALL 178


>M63450-1|AAA29051.1| 3005|Drosophila melanogaster zinc-finger
           homeodomain protein 2 protein.
          Length = 3005

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 12/50 (24%), Positives = 24/50 (48%)
 Frame = +3

Query: 267 EDLLKGRAVLKPIQKCHLAQLSFEGIAYFGERIVEAHHMEMEREKDRILH 416
           +D ++   + KPI  C + +LSF  +  F       H + +E    ++L+
Sbjct: 120 QDQIRAFKIQKPILMCFICKLSFGNVKSFSLHANTEHRLNLEELDQQLLN 169


>AE014135-89|AAF59339.2| 3005|Drosophila melanogaster CG1449-PA
           protein.
          Length = 3005

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 12/50 (24%), Positives = 24/50 (48%)
 Frame = +3

Query: 267 EDLLKGRAVLKPIQKCHLAQLSFEGIAYFGERIVEAHHMEMEREKDRILH 416
           +D ++   + KPI  C + +LSF  +  F       H + +E    ++L+
Sbjct: 120 QDQIRAFKIQKPILMCFICKLSFGNVKSFSLHANTEHRLNLEELDQQLLN 169


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,376,030
Number of Sequences: 53049
Number of extensions: 662874
Number of successful extensions: 1864
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1864
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3190721655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)