Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25g19
         (709 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-3208|AAN13917.2|  853|Drosophila melanogaster CG4917-PA...   109   4e-24
AE014297-3209|AAF56041.3|  872|Drosophila melanogaster CG4917-PB...    98   9e-21
BT001336-1|AAN71091.1|  684|Drosophila melanogaster AT20662p pro...    29   8.2  
AY060655-1|AAL28203.1|  556|Drosophila melanogaster GH08511p pro...    29   8.2  
AE014297-2558|AAN13781.1|  679|Drosophila melanogaster CG31231-P...    29   8.2  

>AE014297-3208|AAN13917.2|  853|Drosophila melanogaster CG4917-PA,
           isoform A protein.
          Length = 853

 Score =  109 bits (262), Expect = 4e-24
 Identities = 61/141 (43%), Positives = 89/141 (63%), Gaps = 3/141 (2%)
 Frame = +2

Query: 170 RKRWNLHDGPQGSLRRLRNQLAEDGCAESQVVLAKQLLEEKC-ELEADKISNFKQALEWL 346
           R+RWNL D  + SL +L++ +AE+GC + Q  LAK+LL+    E    K +  ++A+ WL
Sbjct: 15  RRRWNLED--RASLNKLKHHIAEEGCPQMQYDLAKELLDNSIVEPNLAKGNQSQKAVNWL 72

Query: 347 ICATEQAHPEARRLLRRCIR--SGVIDEDSAAIVRAKSCLAASRQETVARKAARDLFASL 520
           + A    H +A +LLR+C    SG+  E++  + R   CLA +  E  ARKAAR+LFA L
Sbjct: 73  VSAAHNGHEDAVKLLRQCYNDGSGITAENTDEVRR---CLAMTPGERAARKAARELFACL 129

Query: 521 SNGEQYITTVQLERRIREICN 583
           SNG ++IT  QLER++R I N
Sbjct: 130 SNGNEHITPKQLERKMRRIYN 150


>AE014297-3209|AAF56041.3|  872|Drosophila melanogaster CG4917-PB,
           isoform B protein.
          Length = 872

 Score = 98.3 bits (234), Expect = 9e-21
 Identities = 62/160 (38%), Positives = 90/160 (56%), Gaps = 22/160 (13%)
 Frame = +2

Query: 170 RKRWNLHDGPQGSLRRLRNQLAEDGCAESQVVLAKQLLEEKCELEADKISNFK------- 328
           R+RWNL D  + SL +L++ +AE+GC + Q  LAK+LL+       D + N+K       
Sbjct: 15  RRRWNLED--RASLNKLKHHIAEEGCPQMQYDLAKELLDNSIGECKDLLENYKIMKIAMS 72

Query: 329 -------------QALEWLICATEQAHPEARRLLRRCIR--SGVIDEDSAAIVRAKSCLA 463
                        +A+ WL+ A    H +A +LLR+C    SG+  E++  + R   CLA
Sbjct: 73  AVEPNLAKGNQSQKAVNWLVSAAHNGHEDAVKLLRQCYNDGSGITAENTDEVRR---CLA 129

Query: 464 ASRQETVARKAARDLFASLSNGEQYITTVQLERRIREICN 583
            +  E  ARKAAR+LFA LSNG ++IT  QLER++R I N
Sbjct: 130 MTPGERAARKAARELFACLSNGNEHITPKQLERKMRRIYN 169


>BT001336-1|AAN71091.1|  684|Drosophila melanogaster AT20662p
           protein.
          Length = 684

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +2

Query: 245 CAESQVVLAKQLLEEKCELEADKISNFKQALEWLICATEQ 364
           CA   ++   + LEEKC+  A   SN+K+++    C  E+
Sbjct: 537 CANESIIQLSKQLEEKCKDVAVMQSNYKKSMIEETCVREK 576


>AY060655-1|AAL28203.1|  556|Drosophila melanogaster GH08511p
           protein.
          Length = 556

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +2

Query: 245 CAESQVVLAKQLLEEKCELEADKISNFKQALEWLICATEQ 364
           CA   ++   + LEEKC+  A   SN+K+++    C  E+
Sbjct: 409 CANESIIQLSKQLEEKCKDVAVMQSNYKKSMIEETCVREK 448


>AE014297-2558|AAN13781.1|  679|Drosophila melanogaster CG31231-PA
           protein.
          Length = 679

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +2

Query: 245 CAESQVVLAKQLLEEKCELEADKISNFKQALEWLICATEQ 364
           CA   ++   + LEEKC+  A   SN+K+++    C  E+
Sbjct: 532 CANESIIQLSKQLEEKCKDVAVMQSNYKKSMIEETCVREK 571


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,542,032
Number of Sequences: 53049
Number of extensions: 603335
Number of successful extensions: 1278
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1243
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1276
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3128965752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)