Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte25g16
(731 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0767 - 5709733-5709789,5709845-5709871,5710374-5710449,571... 33 0.31
02_01_0030 - 183836-183903,183986-184453,184526-184604,184698-18... 33 0.31
04_04_1309 + 32515026-32515340,32515417-32515686 31 0.71
05_01_0260 - 1993075-1994312,1996249-1997191 29 2.9
01_01_0290 - 2382821-2382872,2382993-2383053,2383340-2383400,238... 29 2.9
07_03_0741 - 21107566-21107838,21107964-21108102,21108189-211084... 29 3.8
03_06_0639 - 35227780-35227813,35227963-35228099,35228505-35229449 29 3.8
02_05_0039 + 25335690-25335883,25335984-25336131,25337292-253373... 29 3.8
10_08_0083 - 14715517-14715595,14716022-14716150,14716280-147164... 29 5.0
08_01_0953 - 9471342-9471420,9471848-9471976,9472106-9472313,947... 29 5.0
06_03_0355 + 19822110-19824491 28 6.6
04_04_1104 - 30928475-30928501,30929008-30929110,30929287-309293... 28 6.6
06_03_1332 - 29403320-29407804 28 8.8
04_01_0100 + 1034057-1034308,1034962-1035078,1035152-1035382,103... 28 8.8
02_05_0672 + 30775458-30775523,30775594-30775662,30775748-307757... 28 8.8
>02_01_0767 -
5709733-5709789,5709845-5709871,5710374-5710449,
5710542-5710661,5711321-5711421,5711618-5711743,
5713504-5713596,5713694-5713816,5713889-5714032,
5714539-5714672,5714893-5715002,5715315-5715430,
5716438-5716572,5716650-5716820,5717545-5717709,
5718165-5718242,5718313-5718445,5718551-5718741,
5718842-5718914,5719001-5719056,5719142-5719300,
5719383-5719496,5719562-5719654,5720544-5720726,
5720801-5720878,5720966-5721052,5721135-5721216,
5721288-5721400,5721486-5721636,5721759-5721877,
5721966-5722163,5722377-5722442,5723837-5723957,
5724224-5724343,5724412-5724542,5725210-5725341,
5725418-5725519,5726231-5726437,5726510-5726626,
5727468-5727623,5727721-5727810,5728624-5728848,
5728969-5729091,5729202-5729284,5729459-5729618,
5730264-5730374,5730652-5730751,5731375-5731454,
5731752-5731847,5731961-5732110
Length = 1991
Score = 32.7 bits (71), Expect = 0.31
Identities = 19/81 (23%), Positives = 35/81 (43%)
Frame = +2
Query: 386 IQNGTTLESLNWPPSLKKIFQLKSKGKVPAEVPVMKTVIEGGATVQVSTQDLSDTDMEDD 565
++NG T E W P ++ +F+L S VP P +K + T + L +
Sbjct: 568 VENGNTTERRKWFPDIEPLFKLLSYENVP---PFLKGALRNSITAFIKVSPLLKDAIWSY 624
Query: 566 ENVYNIKIGDGPDDESNSARI 628
Y++ + P + N+ +I
Sbjct: 625 LEQYDLPVVTPPLGQHNATQI 645
>02_01_0030 -
183836-183903,183986-184453,184526-184604,184698-185183
Length = 366
Score = 32.7 bits (71), Expect = 0.31
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -3
Query: 507 PSITVFMTGTSAGTLPLL-FNWKIFFKEGGQFK 412
P+ T+ M GT G P F WK+FF+E +K
Sbjct: 213 PNATIIMLGTGTGIAPFRSFLWKMFFEEHDDYK 245
>04_04_1309 + 32515026-32515340,32515417-32515686
Length = 194
Score = 31.5 bits (68), Expect = 0.71
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +3
Query: 288 CLHTYALAASFSWTSTLSSRESVGQLMKIYCSLF 389
CL A AA+F+W S S+R +GQ+ + CS F
Sbjct: 138 CLAVVAGAAAFAWVS--SARTRIGQMFTLGCSAF 169
>05_01_0260 - 1993075-1994312,1996249-1997191
Length = 726
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/74 (20%), Positives = 35/74 (47%)
Frame = +2
Query: 374 ILQFIQNGTTLESLNWPPSLKKIFQLKSKGKVPAEVPVMKTVIEGGATVQVSTQDLSDTD 553
+ +FI NGT + L+ S+K + + ++ E + A + + +D+ ++
Sbjct: 461 VYEFISNGTLYDILHSDVSVKCLLSWDDRIRIAVEAAGALAYLHSAAAIPIYHRDVKSSN 520
Query: 554 MEDDENVYNIKIGD 595
+ D+N + K+ D
Sbjct: 521 ILLDDN-FTTKVSD 533
>01_01_0290 -
2382821-2382872,2382993-2383053,2383340-2383400,
2383492-2383551,2383784-2383845,2383997-2384069,
2384261-2384527
Length = 211
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 473 AEVPVMKTVIEGG-ATVQVSTQDLSDTDMEDDENVYNIKIGDGPDDESNSA 622
++V + +EG AT + +D +D + DD+ Y KI DG + + +A
Sbjct: 153 SQVNLTNANLEGALATGNTTFKDFTDVPLRDDQREYLCKIADGVNTTTGNA 203
>07_03_0741 -
21107566-21107838,21107964-21108102,21108189-21108426,
21108629-21108836,21108945-21109066,21109146-21109271,
21109356-21109774,21109844-21110268
Length = 649
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +2
Query: 107 VKMDSRKESLSTLKICRFCLSQDETLLTNLYEKNRAPKN 223
+K+ + + + +++ FCL Q++TLL Y KNR+ N
Sbjct: 392 IKLLAELQHKNLVRLQGFCLHQEQTLLVYEYLKNRSLDN 430
>03_06_0639 - 35227780-35227813,35227963-35228099,35228505-35229449
Length = 371
Score = 29.1 bits (62), Expect = 3.8
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +2
Query: 458 KGKVPAEVPV--MKTVI--EGGATVQVSTQDLSDTDMEDDENVYNIKIGD 595
KGK+ + P MK I EGG T D D DM+ +++++ I+I D
Sbjct: 281 KGKIDVDTPFGNMKLPISKEGGTTRIKKDDDDDDEDMQFNQDLFFIRISD 330
>02_05_0039 +
25335690-25335883,25335984-25336131,25337292-25337349,
25337652-25338116,25338435-25338575,25338694-25339934
Length = 748
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/74 (21%), Positives = 34/74 (45%)
Frame = +2
Query: 374 ILQFIQNGTTLESLNWPPSLKKIFQLKSKGKVPAEVPVMKTVIEGGATVQVSTQDLSDTD 553
+ +FI NGT E L+ S K + + ++ E + A + + +D+ ++
Sbjct: 482 VYEFISNGTLCELLHNDVSAKCLLSWDDRIRIAIETAGALAYLHSAAAIPIFHRDVKSSN 541
Query: 554 MEDDENVYNIKIGD 595
+ D+N + K+ D
Sbjct: 542 ILLDDN-FTAKVSD 554
>10_08_0083 -
14715517-14715595,14716022-14716150,14716280-14716487,
14716789-14716852,14717727-14717768,14718175-14718279,
14718601-14718695,14718789-14718882
Length = 271
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -3
Query: 336 KLRSMKNLQRVHMYGGILSEGKTSIA 259
K+ S K ++RV YG IL E TSI+
Sbjct: 127 KIFSAKRVKRVRSYGNILCESNTSIS 152
>08_01_0953 -
9471342-9471420,9471848-9471976,9472106-9472313,
9472619-9472682,9473557-9473598,9474016-9474120,
9474442-9474536,9474630-9474723
Length = 271
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -3
Query: 336 KLRSMKNLQRVHMYGGILSEGKTSIA 259
K+ S K ++RV YG IL E TSI+
Sbjct: 127 KIFSAKRVKRVRSYGNILCESNTSIS 152
>06_03_0355 + 19822110-19824491
Length = 793
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 527 STQDLSDTDMEDDENVYNIKIGDGPDDESNSA 622
S D TD E+D NV N+ GD ++E+ +
Sbjct: 279 SANDYDSTDGEEDANVENLGEGDSGNEEAEES 310
>04_04_1104 -
30928475-30928501,30929008-30929110,30929287-30929340,
30929803-30929895,30930063-30930140,30930416-30930527,
30930618-30930756,30930823-30930910,30930984-30931079,
30931675-30931781,30931874-30932009,30932089-30932186,
30932954-30933047,30933132-30933301,30933749-30933819,
30936066-30936194,30936552-30936654,30936764-30936907,
30937123-30937245,30937482-30937563,30939044-30939120,
30939261-30939315,30939365-30939443,30939544-30939620,
30939739-30939869,30939947-30940120,30940245-30940310,
30940937-30941572
Length = 1113
Score = 28.3 bits (60), Expect = 6.6
Identities = 30/137 (21%), Positives = 51/137 (37%)
Frame = +2
Query: 185 LTNLYEKNRAPKNAITLQLKILSCVAIEVFPSDKMPPYICTRCKFFMDLNFEFKRICRSA 364
L L+ K+R TL K + +E ++M +F+ + E SA
Sbjct: 424 LVKLFLKSRGMYVCRTLSYKGVDFDIVEAPLEERMMNMYRKAAEFWAEFRLELL----SA 479
Query: 365 DENILQFIQNGTTLESLNWPPSLKKIFQLKSKGKVPAEVPVMKTVIEGGATVQVSTQDLS 544
E+ + I N + L W + + KVPA V + K + V V Q
Sbjct: 480 GESFTEGISN--QIWRLYWASHQRFFRHMCMSAKVPAVVKLAKEALAENKCVVVGLQSTG 537
Query: 545 DTDMEDDENVYNIKIGD 595
+ E+ Y +++ D
Sbjct: 538 EARTEEAITKYGVEMED 554
>06_03_1332 - 29403320-29407804
Length = 1494
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 237 NLKFCPVLRLRFSLRIKCLHTYALAASFSWTSTLSSRESV 356
+LK CP L L + L + CL ++ S + S L S +V
Sbjct: 1089 DLKKCPPLPLEYLLMLSCLRRLTISDSSNVMSHLESENTV 1128
>04_01_0100 +
1034057-1034308,1034962-1035078,1035152-1035382,
1038200-1038455,1038551-1038807,1038978-1039250,
1039617-1039898,1040045-1040165,1040351-1040520,
1040613-1040711
Length = 685
Score = 27.9 bits (59), Expect = 8.8
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +2
Query: 482 PVMKTVIEGGATVQVSTQDLSDTDMEDDENVYNIKIGDGPDDESNSARIKVITTDNSKEK 661
P K+ +E + L+ +D N+ N G P + S+S R +ITT + +EK
Sbjct: 269 PTKKSKVESDEIDKHGAGTLNTNTESEDPNLSN---GLEPSNNSSSCRTDLITTPHLREK 325
Query: 662 N*I-F*QRLFV 691
I F ++L++
Sbjct: 326 KIIDFREKLYL 336
>02_05_0672 +
30775458-30775523,30775594-30775662,30775748-30775797,
30775869-30775929,30776016-30776381,30776542-30776754,
30776826-30777056,30777502-30777615,30777703-30778495,
30778535-30778905,30779007-30779378,30779448-30780438,
30781068-30781141,30781953-30782030,30782448-30782525
Length = 1308
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 545 DTDMEDDENVYNIKIGDGP 601
DTD EDD++VY DGP
Sbjct: 576 DTDSEDDDSVYETTEEDGP 594
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,717,225
Number of Sequences: 37544
Number of extensions: 306954
Number of successful extensions: 866
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 866
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1921741964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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