Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25g16
         (731 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z19154-2|CAA79554.1|  504|Caenorhabditis elegans Hypothetical pr...    32   0.48 
Z92784-7|CAE54895.1|  808|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z92784-6|CAB07197.1|  805|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z81526-9|CAE54892.1|  808|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z81526-8|CAB04268.1|  805|Caenorhabditis elegans Hypothetical pr...    29   2.6  
U53155-2|AAC48266.2|  918|Caenorhabditis elegans Valyl trna synt...    29   2.6  
U39652-1|AAA80403.2|  552|Caenorhabditis elegans Abnormal cell m...    29   3.4  
AB126261-1|BAD02168.1|  552|Caenorhabditis elegans MIG-23 protein.     29   3.4  
Z68270-13|CAD21675.1|  225|Caenorhabditis elegans Hypothetical p...    28   5.9  
Z68213-7|CAD21589.1|  225|Caenorhabditis elegans Hypothetical pr...    28   5.9  
AF202932-1|AAK69382.1|  225|Caenorhabditis elegans ICln2 protein.      28   5.9  
Z35663-11|CAA84732.2|  791|Caenorhabditis elegans Hypothetical p...    28   7.8  

>Z19154-2|CAA79554.1|  504|Caenorhabditis elegans Hypothetical
           protein C40H1.3 protein.
          Length = 504

 Score = 31.9 bits (69), Expect = 0.48
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = +2

Query: 422 PPSLKKIFQLKSKGKVPAEVPVMKTVIEGGATVQ 523
           P + +K  +L + G VP  +PV+ T + GG+TVQ
Sbjct: 246 PKTTRKNQRLSTIGHVPEAIPVVDTPLPGGSTVQ 279


>Z92784-7|CAE54895.1|  808|Caenorhabditis elegans Hypothetical
           protein F31C3.2b protein.
          Length = 808

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
 Frame = +2

Query: 416 NWPPSLKKIFQLKSKGKVPAEVPVMKTVIEG---GATVQVSTQDLS 544
           +W   LKKI  +K+   VPA+VP++K ++ G   G  V ++  +++
Sbjct: 564 HWSHPLKKI--IKTMQLVPAKVPIVKMILNGEFDGIEVDINVNNIA 607


>Z92784-6|CAB07197.1|  805|Caenorhabditis elegans Hypothetical
           protein F31C3.2a protein.
          Length = 805

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
 Frame = +2

Query: 416 NWPPSLKKIFQLKSKGKVPAEVPVMKTVIEG---GATVQVSTQDLS 544
           +W   LKKI  +K+   VPA+VP++K ++ G   G  V ++  +++
Sbjct: 561 HWSHPLKKI--IKTMQLVPAKVPIVKMILNGEFDGIEVDINVNNIA 604


>Z81526-9|CAE54892.1|  808|Caenorhabditis elegans Hypothetical
           protein F31C3.2b protein.
          Length = 808

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
 Frame = +2

Query: 416 NWPPSLKKIFQLKSKGKVPAEVPVMKTVIEG---GATVQVSTQDLS 544
           +W   LKKI  +K+   VPA+VP++K ++ G   G  V ++  +++
Sbjct: 564 HWSHPLKKI--IKTMQLVPAKVPIVKMILNGEFDGIEVDINVNNIA 607


>Z81526-8|CAB04268.1|  805|Caenorhabditis elegans Hypothetical
           protein F31C3.2a protein.
          Length = 805

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
 Frame = +2

Query: 416 NWPPSLKKIFQLKSKGKVPAEVPVMKTVIEG---GATVQVSTQDLS 544
           +W   LKKI  +K+   VPA+VP++K ++ G   G  V ++  +++
Sbjct: 561 HWSHPLKKI--IKTMQLVPAKVPIVKMILNGEFDGIEVDINVNNIA 604


>U53155-2|AAC48266.2|  918|Caenorhabditis elegans Valyl trna
           synthetase protein 1 protein.
          Length = 918

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 17/72 (23%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
 Frame = +2

Query: 164 LSQDETLLTNLYEKNRAPKNAITLQLKILSCVAIEVFPSDKMPPYICTRC-KFFMDLNFE 340
           L +   L+T +    R+ +  + L  +I     +E+ P+D  P  +     +      FE
Sbjct: 748 LEEAMKLITAMMAAIRSTRQTLQLPQRITFSGILEMAPTDTSPSELRILADEVTQTCGFE 807

Query: 341 FKRICRSADENI 376
            +++CR  DE+I
Sbjct: 808 LQKVCREVDEDI 819


>U39652-1|AAA80403.2|  552|Caenorhabditis elegans Abnormal cell
           migration protein 23 protein.
          Length = 552

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = +2

Query: 506 GGATVQVSTQDLSDTDMEDDENVYNIKIGDGPDDESNSARIKVIT 640
           GGA+ Q++ + L DTD     NV NI +G   DD     ++ V T
Sbjct: 216 GGASAQIAFE-LPDTDSFSSINVENINLGCREDDSLFKYKLFVTT 259


>AB126261-1|BAD02168.1|  552|Caenorhabditis elegans MIG-23 protein.
          Length = 552

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = +2

Query: 506 GGATVQVSTQDLSDTDMEDDENVYNIKIGDGPDDESNSARIKVIT 640
           GGA+ Q++ + L DTD     NV NI +G   DD     ++ V T
Sbjct: 216 GGASAQIAFE-LPDTDSFSSINVENINLGCREDDSLFKYKLFVTT 259


>Z68270-13|CAD21675.1|  225|Caenorhabditis elegans Hypothetical
           protein C01F6.8b protein.
          Length = 225

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 14/51 (27%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
 Frame = +2

Query: 482 PVMKTVIEGGAT--VQVSTQDLSDTDMEDDENVYNIKIGDGPDDESNSARI 628
           PV++T+ E      ++++  +L D + +DDE    ++I   PDD+ + ++I
Sbjct: 94  PVLRTIQEDDEQRGLELAAAELEDEESDDDEEEPALEIRFVPDDKDSLSQI 144


>Z68213-7|CAD21589.1|  225|Caenorhabditis elegans Hypothetical
           protein C01F6.8b protein.
          Length = 225

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 14/51 (27%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
 Frame = +2

Query: 482 PVMKTVIEGGAT--VQVSTQDLSDTDMEDDENVYNIKIGDGPDDESNSARI 628
           PV++T+ E      ++++  +L D + +DDE    ++I   PDD+ + ++I
Sbjct: 94  PVLRTIQEDDEQRGLELAAAELEDEESDDDEEEPALEIRFVPDDKDSLSQI 144


>AF202932-1|AAK69382.1|  225|Caenorhabditis elegans ICln2 protein.
          Length = 225

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 14/51 (27%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
 Frame = +2

Query: 482 PVMKTVIEGGAT--VQVSTQDLSDTDMEDDENVYNIKIGDGPDDESNSARI 628
           PV++T+ E      ++++  +L D + +DDE    ++I   PDD+ + ++I
Sbjct: 94  PVLRTIQEDDEQRGLELAAAELEDEESDDDEEEPALEIRFVPDDKDSLSQI 144


>Z35663-11|CAA84732.2|  791|Caenorhabditis elegans Hypothetical
           protein T04A8.13 protein.
          Length = 791

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +3

Query: 258 LRLRFSLRIKCLHTYALAASFSWTSTLSSRESVGQLMKIYCSLFRME 398
           LR    LR + +H   L +  S  +T      + Q MK+ C LF M+
Sbjct: 402 LRKAVGLREQIIHKMPLKSRISLAATSKGERYLVQNMKVECKLFVMD 448


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,496,246
Number of Sequences: 27780
Number of extensions: 310961
Number of successful extensions: 884
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 883
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)