Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25g11
         (673 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z11505-3|CAA77584.2|  468|Caenorhabditis elegans Hypothetical pr...    29   3.0  
U46668-4|AAA93348.3|  951|Caenorhabditis elegans Nematode astaci...    29   3.0  
AL033514-30|CAA22091.1|  313|Caenorhabditis elegans Hypothetical...    28   5.3  
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr...    28   6.9  
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p...    28   6.9  
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane...    28   6.9  
AF125956-4|AAD14723.1|  353|Caenorhabditis elegans Serpentine re...    28   6.9  
AF003137-3|AAB93640.1|  625|Caenorhabditis elegans Hypothetical ...    28   6.9  
AC199169-6|ABO33256.1|  502|Caenorhabditis elegans Hypothetical ...    27   9.2  

>Z11505-3|CAA77584.2|  468|Caenorhabditis elegans Hypothetical
           protein F59B2.5 protein.
          Length = 468

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
 Frame = +2

Query: 170 NGTEVV-ISNARKPNLFH--QSYGSLRKRKGRVCRNI 271
           NGT+V  +SN R PN+FH  +S GS R R     R +
Sbjct: 31  NGTDVKQVSNRRNPNIFHMVRSPGSPRTRDAHKNRGL 67


>U46668-4|AAA93348.3|  951|Caenorhabditis elegans Nematode astacin
           protease protein39 protein.
          Length = 951

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -1

Query: 190 YNHFCTIYLFQTQAFLHFKIIERI 119
           Y H+ T  ++ T +F HF+I++RI
Sbjct: 320 YLHWKTFLIYYTNSFFHFEILDRI 343


>AL033514-30|CAA22091.1|  313|Caenorhabditis elegans Hypothetical
           protein Y75B8A.31 protein.
          Length = 313

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -1

Query: 271 NVSTDSSLSFSKTTVRLME*IWFPCI*YNHFCTIYL 164
           N S D  L +S+T V   E +W  CI  ++  +IY+
Sbjct: 139 NESKDQDLKYSRTPVEHAETVWIACIEPSNAKSIYV 174


>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical
           protein K08E5.3a protein.
          Length = 3767

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +2

Query: 548 PYDYMNNIRDVANENISSCAENSSVCSTDQEGFQKAE 658
           P  Y+N + D  +++   CA+N   CS   +   KA+
Sbjct: 113 PSKYLNGVADCKDKSDEPCAQNQFQCSDGTKCIPKAQ 149


>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
           protein K08E5.3a protein.
          Length = 3767

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +2

Query: 548 PYDYMNNIRDVANENISSCAENSSVCSTDQEGFQKAE 658
           P  Y+N + D  +++   CA+N   CS   +   KA+
Sbjct: 113 PSKYLNGVADCKDKSDEPCAQNQFQCSDGTKCIPKAQ 149


>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane
           cell adhesion receptorMUA-3 precursor protein.
          Length = 3767

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +2

Query: 548 PYDYMNNIRDVANENISSCAENSSVCSTDQEGFQKAE 658
           P  Y+N + D  +++   CA+N   CS   +   KA+
Sbjct: 113 PSKYLNGVADCKDKSDEPCAQNQFQCSDGTKCIPKAQ 149


>AF125956-4|AAD14723.1|  353|Caenorhabditis elegans Serpentine
           receptor, class h protein78 protein.
          Length = 353

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 21/93 (22%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
 Frame = -1

Query: 334 QIRQGITSVQLRFNCYTVLFKNVSTDSSLSFSKTTVRLME*IWFP-----CI*YNHFCTI 170
           Q+  GI S+       T+LF+N       +  K + +L++ +++      C+ ++    +
Sbjct: 110 QLWIGIFSINQMIMSITILFENRYNSIPFNKHKISGKLLKFVYYTVRVIICVFFSSILFL 169

Query: 169 YLFQTQAFLHFKIIERIIQESMPYFRK*YFNLV 71
           YL + Q     +I+ +I   +  YF+   F LV
Sbjct: 170 YLPENQEAALLEILTKIPCPTEEYFKNTVFVLV 202


>AF003137-3|AAB93640.1|  625|Caenorhabditis elegans Hypothetical
           protein C27A12.2 protein.
          Length = 625

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
 Frame = +2

Query: 446 HRNSLDKQTYMPWNSKGRKHKKKGMSPETYNSKYPYD---YMNNIRDVA-NENISSCAEN 613
           H     +QTY+ W    ++  + G   E  N +YP D   YM+++ D + ++ I+   E+
Sbjct: 556 HHEKKCEQTYVTWVEGEQQSVESGEEDEESNGEYPDDDEEYMDDMIDASTSQPINRVVEH 615

Query: 614 SS 619
            S
Sbjct: 616 FS 617


>AC199169-6|ABO33256.1|  502|Caenorhabditis elegans Hypothetical
           protein F38A1.5 protein.
          Length = 502

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +2

Query: 527 ETYNSKYPYDYMNNIRDV 580
           ETY+ K  Y+Y+NNI +V
Sbjct: 466 ETYSMKLQYNYINNINEV 483


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,889,926
Number of Sequences: 27780
Number of extensions: 275282
Number of successful extensions: 867
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 867
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)