Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25g09
         (651 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68104-7|CAI79159.1| 1086|Caenorhabditis elegans Hypothetical pr...    31   0.71 
Z68104-4|CAA92116.1| 1107|Caenorhabditis elegans Hypothetical pr...    31   0.71 
Z68104-3|CAA92115.1| 1119|Caenorhabditis elegans Hypothetical pr...    31   0.71 
AF232770-1|AAF37866.1| 1107|Caenorhabditis elegans SLO-2 potassi...    31   0.71 
AF173828-1|AAD51350.1| 1119|Caenorhabditis elegans putative pota...    31   0.71 
AL132860-1|CAB60513.2|  616|Caenorhabditis elegans Hypothetical ...    30   1.6  
Z83119-5|CAB05582.3| 1364|Caenorhabditis elegans Hypothetical pr...    29   2.9  
L16679-1|AAA28092.5| 2104|Caenorhabditis elegans Muscle position...    29   2.9  
AF289202-1|AAK69172.1| 2104|Caenorhabditis elegans transmembrane...    29   2.9  
U97006-5|AAC47967.1|  222|Caenorhabditis elegans Hypothetical pr...    27   8.7  
AC024770-1|AAF59482.1|  261|Caenorhabditis elegans Hypothetical ...    27   8.7  

>Z68104-7|CAI79159.1| 1086|Caenorhabditis elegans Hypothetical
           protein F08B12.3c protein.
          Length = 1086

 Score = 31.1 bits (67), Expect = 0.71
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -1

Query: 195 KSRTSPCCIPMTKSCAHFHTTFEVEHCWR 109
           K R S CC+ + + CAH   T   E+ WR
Sbjct: 686 KERRSLCCLKLDEKCAHKSATSAHEYQWR 714


>Z68104-4|CAA92116.1| 1107|Caenorhabditis elegans Hypothetical
           protein F08B12.3b protein.
          Length = 1107

 Score = 31.1 bits (67), Expect = 0.71
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -1

Query: 195 KSRTSPCCIPMTKSCAHFHTTFEVEHCWR 109
           K R S CC+ + + CAH   T   E+ WR
Sbjct: 707 KERRSLCCLKLDEKCAHKSATSAHEYQWR 735


>Z68104-3|CAA92115.1| 1119|Caenorhabditis elegans Hypothetical
           protein F08B12.3a protein.
          Length = 1119

 Score = 31.1 bits (67), Expect = 0.71
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -1

Query: 195 KSRTSPCCIPMTKSCAHFHTTFEVEHCWR 109
           K R S CC+ + + CAH   T   E+ WR
Sbjct: 707 KERRSLCCLKLDEKCAHKSATSAHEYQWR 735


>AF232770-1|AAF37866.1| 1107|Caenorhabditis elegans SLO-2 potassium
           channel protein.
          Length = 1107

 Score = 31.1 bits (67), Expect = 0.71
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -1

Query: 195 KSRTSPCCIPMTKSCAHFHTTFEVEHCWR 109
           K R S CC+ + + CAH   T   E+ WR
Sbjct: 707 KERRSLCCLKLDEKCAHKSATSAHEYQWR 735


>AF173828-1|AAD51350.1| 1119|Caenorhabditis elegans putative
           potassium channel Slo-2 protein.
          Length = 1119

 Score = 31.1 bits (67), Expect = 0.71
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -1

Query: 195 KSRTSPCCIPMTKSCAHFHTTFEVEHCWR 109
           K R S CC+ + + CAH   T   E+ WR
Sbjct: 707 KERRSLCCLKLDEKCAHKSATSAHEYQWR 735


>AL132860-1|CAB60513.2|  616|Caenorhabditis elegans Hypothetical
           protein Y56A3A.2 protein.
          Length = 616

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
 Frame = +1

Query: 415 MLFSLGPNAVP----YQTDINDDRIFDPEIMNVLETNVIEDGNEEE 540
           +L SL P   P      T  N D+I +P IM   E ++IEDG + E
Sbjct: 148 VLTSLSPAVAPPPAKTTTAANSDQIHNPVIMEDTEYDMIEDGQKSE 193


>Z83119-5|CAB05582.3| 1364|Caenorhabditis elegans Hypothetical protein
            R05H10.6 protein.
          Length = 1364

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 11/78 (14%)
 Frame = +1

Query: 4    LASAVHILKLERYRED*HGPCAR-------MTRKIVKRSTFLAPTVLYLKGG----VEMS 150
            +  A  IL ++  R+D H P  R       MT +  +  T + P + ++  G    + ++
Sbjct: 1213 IVPAERILAMQDMRQDKHQPILRKPASPYLMTSEDPRSDTLIQPELFFMVLGFLVLLAIT 1272

Query: 151  TRLCHRYATWASSRFVRE 204
              LC   A +A SRF+RE
Sbjct: 1273 LALCGMMACFARSRFLRE 1290


>L16679-1|AAA28092.5| 2104|Caenorhabditis elegans Muscle positioning
            protein 4 protein.
          Length = 2104

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -1

Query: 201  SDKSRTSPCCIPMTKSCAHFHTTFEVEHCWR*KC 100
            S K   + C IP   +C+HF T  ++E  +  KC
Sbjct: 1117 SCKGLVNECNIPHLNNCSHFATCIDLEEGYECKC 1150


>AF289202-1|AAK69172.1| 2104|Caenorhabditis elegans transmembrane
            matrix receptor MUP-4 protein.
          Length = 2104

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -1

Query: 201  SDKSRTSPCCIPMTKSCAHFHTTFEVEHCWR*KC 100
            S K   + C IP   +C+HF T  ++E  +  KC
Sbjct: 1117 SCKGLVNECNIPHLNNCSHFATCIDLEEGYECKC 1150


>U97006-5|AAC47967.1|  222|Caenorhabditis elegans Hypothetical
           protein C13F10.7 protein.
          Length = 222

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 18/52 (34%), Positives = 24/52 (46%)
 Frame = +3

Query: 9   FGSTYTKIGTIQRRLAWPLRKDDTQNREAFHIFSANSALPQRWCGNEHTTLS 164
           FGST T + T     + PL KDD   ++      A SA P R+  N    +S
Sbjct: 15  FGSTSTTVTTTTDTDS-PLSKDDESGKKPSLASLAQSAFPSRYDPNAFVDIS 65


>AC024770-1|AAF59482.1|  261|Caenorhabditis elegans Hypothetical
           protein Y39H10A.4 protein.
          Length = 261

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
 Frame = -1

Query: 477 YSIIINIRLIWYSIRPQAK-EHCNPNFLRPYLEPQPLLYIYI 355
           Y  I+N RL   SI P++K E+ + + +R  +EPQP  + Y+
Sbjct: 26  YFEILN-RLQVSSIIPKSKSEYVDAHMIRVSIEPQPTAFAYV 66


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,923,867
Number of Sequences: 27780
Number of extensions: 288886
Number of successful extensions: 667
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 667
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)