Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte25g07
(240 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80444-2|AAB37788.1| 305|Caenorhabditis elegans Collagen protei... 34 0.015
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 30 0.19
AF067607-9|AAF98609.1| 460|Caenorhabditis elegans Collagen prot... 30 0.25
AF000263-19|AAG00021.1| 321|Caenorhabditis elegans Collagen pro... 29 0.33
Z70271-3|CAA94234.1| 358|Caenorhabditis elegans Hypothetical pr... 29 0.44
U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protei... 29 0.44
Z46791-3|CAA86757.1| 323|Caenorhabditis elegans Hypothetical pr... 29 0.58
U50191-2|AAK31556.2| 335|Caenorhabditis elegans Dumpy : shorter... 29 0.58
U50191-1|AAO38600.2| 372|Caenorhabditis elegans Dumpy : shorter... 29 0.58
L12692-1|AAA17395.2| 356|Caenorhabditis elegans collagen protein. 29 0.58
AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical... 29 0.58
Z78064-2|CAB01508.2| 317|Caenorhabditis elegans Hypothetical pr... 28 0.77
Z69662-1|CAA93499.1| 359|Caenorhabditis elegans Hypothetical pr... 28 0.77
Z66498-1|CAA91290.1| 304|Caenorhabditis elegans Hypothetical pr... 28 0.77
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 28 0.77
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 28 0.77
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 28 1.0
Z73972-2|CAA98258.1| 316|Caenorhabditis elegans Hypothetical pr... 28 1.0
Z73972-1|CAA98257.1| 316|Caenorhabditis elegans Hypothetical pr... 28 1.0
Z71178-2|CAA94875.1| 297|Caenorhabditis elegans Hypothetical pr... 28 1.0
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 28 1.0
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 28 1.0
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 28 1.0
X51623-1|CAA35955.1| 316|Caenorhabditis elegans collagen protein. 28 1.0
X51622-1|CAA35954.1| 316|Caenorhabditis elegans collagen protein. 28 1.0
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 28 1.0
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 28 1.0
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 28 1.0
DQ178246-1|ABA18185.1| 482|Caenorhabditis elegans TPX2-related ... 28 1.0
DQ178245-1|ABA18184.1| 507|Caenorhabditis elegans TPX2-related ... 28 1.0
AC025716-4|AAL32238.1| 482|Caenorhabditis elegans Tpx2 (targeti... 28 1.0
AC025716-2|AAK39617.1| 507|Caenorhabditis elegans Tpx2 (targeti... 28 1.0
Z93390-7|CAB07677.1| 931|Caenorhabditis elegans Hypothetical pr... 27 1.3
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 27 1.3
AL032675-2|CAA21780.1| 931|Caenorhabditis elegans Hypothetical ... 27 1.3
AF025458-5|AAB70974.1| 298|Caenorhabditis elegans Squat protein... 27 1.3
AC024805-16|AAK39336.1| 448|Caenorhabditis elegans Hypothetical... 27 1.3
Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical pr... 27 1.8
Z81466-2|CAC42256.1| 954|Caenorhabditis elegans Hypothetical pr... 27 1.8
Z81466-1|CAB03869.1| 982|Caenorhabditis elegans Hypothetical pr... 27 1.8
Z69383-13|CAA93404.2| 181|Caenorhabditis elegans Hypothetical p... 27 1.8
AJ133374-1|CAB40208.1| 954|Caenorhabditis elegans lin-10 protei... 27 1.8
AF003139-6|AAB54156.1| 327|Caenorhabditis elegans Collagen prot... 27 1.8
AC006790-10|AAF60736.1| 371|Caenorhabditis elegans Collagen pro... 27 1.8
Z99281-48|CAE18025.2| 661|Caenorhabditis elegans Hypothetical p... 27 2.3
Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical p... 27 2.3
Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical pr... 27 2.3
Z70284-9|CAA94280.1| 290|Caenorhabditis elegans Hypothetical pr... 27 2.3
AL117204-40|CAL69746.1| 99|Caenorhabditis elegans Hypothetical... 27 2.3
AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen prot... 27 2.3
AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen pro... 27 2.3
AF016687-1|AAC48094.2| 315|Caenorhabditis elegans Dumpy : short... 27 2.3
AC006712-10|AAK39322.2| 273|Caenorhabditis elegans Hypothetical... 27 2.3
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 26 3.1
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 26 3.1
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 26 3.1
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 26 3.1
Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical pr... 26 3.1
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 26 3.1
AL032634-3|CAE45092.1| 412|Caenorhabditis elegans Hypothetical ... 26 3.1
AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen prot... 26 3.1
AF003150-3|AAB54214.1| 208|Caenorhabditis elegans Collagen prot... 26 3.1
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 26 4.1
Z74037-4|CAA98490.1| 295|Caenorhabditis elegans Hypothetical pr... 26 4.1
Z70681-1|CAA94580.1| 307|Caenorhabditis elegans Hypothetical pr... 26 4.1
X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein. 26 4.1
U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protei... 26 4.1
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 26 4.1
U50312-9|AAA92325.1| 294|Caenorhabditis elegans Collagen protei... 26 4.1
U50312-8|AAA92324.1| 294|Caenorhabditis elegans Collagen protei... 26 4.1
U50312-7|AAA92323.2| 306|Caenorhabditis elegans Collagen protei... 26 4.1
U41748-3|AAA83336.1| 452|Caenorhabditis elegans Dumpy : shorter... 26 4.1
U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter... 26 4.1
U41011-8|AAA82291.2| 321|Caenorhabditis elegans Collagen protei... 26 4.1
AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen prot... 26 4.1
AC006603-1|AAF39749.1| 772|Caenorhabditis elegans Hypothetical ... 26 4.1
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 25 5.4
Z82080-2|CAB04951.1| 428|Caenorhabditis elegans Hypothetical pr... 25 5.4
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 25 5.4
Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical pr... 25 5.4
Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical pr... 25 5.4
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 25 5.4
Z73969-6|CAA98236.1| 295|Caenorhabditis elegans Hypothetical pr... 25 5.4
Z72506-3|CAA96617.1| 310|Caenorhabditis elegans Hypothetical pr... 25 5.4
Z71178-1|CAA94874.1| 297|Caenorhabditis elegans Hypothetical pr... 25 5.4
Z69659-1|CAA93483.1| 329|Caenorhabditis elegans Hypothetical pr... 25 5.4
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 25 5.4
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 25 5.4
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 25 5.4
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 25 5.4
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 25 5.4
AF100669-11|AAK39270.2| 737|Caenorhabditis elegans Dipeptidyl p... 25 5.4
Z82083-5|CAB04973.1| 298|Caenorhabditis elegans Hypothetical pr... 25 7.2
Z54237-4|CAN86899.1| 297|Caenorhabditis elegans Hypothetical pr... 25 7.2
Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical pr... 25 7.2
U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protei... 25 7.2
U41624-5|AAF99941.1| 314|Caenorhabditis elegans Collagen protei... 25 7.2
M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein. 25 7.2
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 25 7.2
AF067616-11|AAC19194.2| 627|Caenorhabditis elegans Collagen pro... 25 7.2
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 25 7.2
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 25 7.2
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 25 9.5
Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical pr... 25 9.5
Z81540-9|CAD89742.1| 740|Caenorhabditis elegans Hypothetical pr... 25 9.5
Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical pr... 25 9.5
Z77132-3|CAB00860.1| 310|Caenorhabditis elegans Hypothetical pr... 25 9.5
Z77132-2|CAB00858.1| 294|Caenorhabditis elegans Hypothetical pr... 25 9.5
Z72509-5|CAA96649.1| 294|Caenorhabditis elegans Hypothetical pr... 25 9.5
Z71262-8|CAA95812.1| 302|Caenorhabditis elegans Hypothetical pr... 25 9.5
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 25 9.5
Z70208-1|CAA94141.1| 339|Caenorhabditis elegans Hypothetical pr... 25 9.5
Z54237-5|CAN86900.1| 273|Caenorhabditis elegans Hypothetical pr... 25 9.5
U40060-2|AAP82656.1| 108|Caenorhabditis elegans Collagen protei... 25 9.5
U40060-1|AAA81141.1| 341|Caenorhabditis elegans Collagen protei... 25 9.5
M25478-1|AAA27992.1| 168|Caenorhabditis elegans collagen protein. 25 9.5
AF039720-3|AAB96697.1| 281|Caenorhabditis elegans Collagen prot... 25 9.5
>U80444-2|AAB37788.1| 305|Caenorhabditis elegans Collagen protein
58 protein.
Length = 305
Score = 33.9 bits (74), Expect = 0.015
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = -2
Query: 170 KRMPAPPGAHGARSTTGXPGGSRSCNVHNAPTGDSFA 60
+R+P PPG GA +G GG S + AP GDS A
Sbjct: 228 RRIPGPPGPRGAEGDSGVQGGPGSPGLAGAP-GDSGA 263
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 30.3 bits (65), Expect = 0.19
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = -2
Query: 176 PSKRMPAPPGAHGARSTTGXPGGSRSCNVHNAPTGDSFATL-FARPVAAT 30
P RMP PP A GA S +G G + + P S A+ +P+++T
Sbjct: 823 PQNRMPPPPPAQGAPSPSGAAGSNGKQPRYGTPAPPSRASAPTPQPLSST 872
Score = 25.0 bits (52), Expect = 7.2
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -2
Query: 191 SXRSAPSKRMPAPPGAHGARSTTGXPGG 108
S AP PPG GA G PGG
Sbjct: 435 SQHGAPGGSGAPPPGPPGAYPGNGAPGG 462
>AF067607-9|AAF98609.1| 460|Caenorhabditis elegans Collagen protein
102 protein.
Length = 460
Score = 29.9 bits (64), Expect = 0.25
Identities = 22/66 (33%), Positives = 24/66 (36%), Gaps = 1/66 (1%)
Frame = -2
Query: 209 GWKATASXRSAPSKRMPA-PPGAHGARSTTGXPGGSRSCNVHNAPTGDSFATLFARPVAA 33
G A S P PA PPG +G G PG AP D A P +
Sbjct: 221 GPNGEAGAGSGPGPEGPAGPPGPNGKDGEAGAPGKDGDAGADGAPGTD--AAYCPCPPRS 278
Query: 32 TALAAG 15
AL AG
Sbjct: 279 AALGAG 284
>AF000263-19|AAG00021.1| 321|Caenorhabditis elegans Collagen
protein 56 protein.
Length = 321
Score = 29.5 bits (63), Expect = 0.33
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = -2
Query: 227 GRGASSGWKATASXRSAPSKRMPAPPGAHGARSTTGXPGGS 105
G S G + P + + APPG+ G R G PG S
Sbjct: 210 GPKGSVGPRGLTGQPGMPGRTVNAPPGSPGIRGRPGMPGAS 250
>Z70271-3|CAA94234.1| 358|Caenorhabditis elegans Hypothetical
protein W08D2.6 protein.
Length = 358
Score = 29.1 bits (62), Expect = 0.44
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -2
Query: 185 RSAPSKRMPAPPGAHGARSTTGXPGGSRSCNVHNAPTG 72
+ +R+ PG G + TG P G++ HN PTG
Sbjct: 248 KGGDGRRLIGRPGPKGQKGETGHP-GAQGTPGHNGPTG 284
>U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protein
139 protein.
Length = 310
Score = 29.1 bits (62), Expect = 0.44
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = -2
Query: 164 MPAPPGAHGARSTTGXPGGSRSCNVHNAP 78
+P PPG G G PG +C H P
Sbjct: 111 LPGPPGTPGPAGRPGKPGRPGACGNHGNP 139
Score = 27.1 bits (57), Expect = 1.8
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = -2
Query: 227 GRGASSGWKATASXRSAPSKRMPAPPGAHGARSTTGXPGGSRSCNVHNAPTG 72
G G SG + AP P PG G G PG S S P G
Sbjct: 182 GVGGGSGAPGAPGPKGAPGG--PGQPGRDGQPGQAGQPGSSSSEPGQPGPNG 231
>Z46791-3|CAA86757.1| 323|Caenorhabditis elegans Hypothetical
protein C09G5.4 protein.
Length = 323
Score = 28.7 bits (61), Expect = 0.58
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -2
Query: 161 PAPPGAHGARSTTGXPGGS 105
P PPGA G R G PGG+
Sbjct: 95 PGPPGAPGDRGLDGQPGGA 113
>U50191-2|AAK31556.2| 335|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 10, isoform a protein.
Length = 335
Score = 28.7 bits (61), Expect = 0.58
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 9/48 (18%)
Frame = -2
Query: 227 GRGASSGWKATA---SXRSAPSKR------MPAPPGAHGARSTTGXPG 111
G GAS G++ TA AP + +P PPG G+ T G PG
Sbjct: 75 GSGASHGFRPTAYGDEITGAPLETECPGCCIPGPPGPRGSSGTPGKPG 122
Score = 25.0 bits (52), Expect = 7.2
Identities = 15/55 (27%), Positives = 20/55 (36%), Gaps = 1/55 (1%)
Frame = -2
Query: 230 LGRGASSGWKATASXRSAPSKRMPA-PPGAHGARSTTGXPGGSRSCNVHNAPTGD 69
+G G K AP + P PPG G G G + ++ P GD
Sbjct: 172 VGPPGPPGLKGIDGEDGAPGETGPTGPPGYRGGPGAPGDKGPTPEGDLKEGPPGD 226
>U50191-1|AAO38600.2| 372|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 10, isoform b protein.
Length = 372
Score = 28.7 bits (61), Expect = 0.58
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 9/48 (18%)
Frame = -2
Query: 227 GRGASSGWKATA---SXRSAPSKR------MPAPPGAHGARSTTGXPG 111
G GAS G++ TA AP + +P PPG G+ T G PG
Sbjct: 112 GSGASHGFRPTAYGDEITGAPLETECPGCCIPGPPGPRGSSGTPGKPG 159
Score = 25.0 bits (52), Expect = 7.2
Identities = 15/55 (27%), Positives = 20/55 (36%), Gaps = 1/55 (1%)
Frame = -2
Query: 230 LGRGASSGWKATASXRSAPSKRMPA-PPGAHGARSTTGXPGGSRSCNVHNAPTGD 69
+G G K AP + P PPG G G G + ++ P GD
Sbjct: 209 VGPPGPPGLKGIDGEDGAPGETGPTGPPGYRGGPGAPGDKGPTPEGDLKEGPPGD 263
>L12692-1|AAA17395.2| 356|Caenorhabditis elegans collagen protein.
Length = 356
Score = 28.7 bits (61), Expect = 0.58
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 9/48 (18%)
Frame = -2
Query: 227 GRGASSGWKATA---SXRSAPSKR------MPAPPGAHGARSTTGXPG 111
G GAS G++ TA AP + +P PPG G+ T G PG
Sbjct: 96 GSGASHGFRPTAYGDEITGAPLETECPGCCIPGPPGPRGSSGTPGKPG 143
Score = 25.0 bits (52), Expect = 7.2
Identities = 15/55 (27%), Positives = 20/55 (36%), Gaps = 1/55 (1%)
Frame = -2
Query: 230 LGRGASSGWKATASXRSAPSKRMPA-PPGAHGARSTTGXPGGSRSCNVHNAPTGD 69
+G G K AP + P PPG G G G + ++ P GD
Sbjct: 193 VGPPGPPGLKGIDGEDGAPGETGPTGPPGYRGGPGAPGDKGPTPEGDLKEGPPGD 247
>AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical
protein Y51H4A.9 protein.
Length = 351
Score = 28.7 bits (61), Expect = 0.58
Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 4/54 (7%)
Frame = -2
Query: 227 GRGASSGWKATASXRSAPSKR----MPAPPGAHGARSTTGXPGGSRSCNVHNAP 78
G + G K + AP + +P PPG G+ +G PG + + AP
Sbjct: 214 GPSGAPGQKGPSGAPGAPGQSGGSALPGPPGPAGSPGRSGQPGSNGNVGAPGAP 267
Score = 25.8 bits (54), Expect = 4.1
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 109 PPGXPVVERAPWAPGGAGMRFEGA 180
PPG P AP PG AG GA
Sbjct: 282 PPGPPGPSGAPGHPGQAGSSLPGA 305
>Z78064-2|CAB01508.2| 317|Caenorhabditis elegans Hypothetical
protein F57B1.4 protein.
Length = 317
Score = 28.3 bits (60), Expect = 0.77
Identities = 15/54 (27%), Positives = 22/54 (40%), Gaps = 4/54 (7%)
Frame = -2
Query: 227 GRGASSGWKATASXRSAPSKR----MPAPPGAHGARSTTGXPGGSRSCNVHNAP 78
G + G K + AP + +P PPG G +G PG + + AP
Sbjct: 180 GPSGAPGQKGPSGAPGAPGQSGGASLPGPPGPAGPPGPSGQPGSNGNAGAPGAP 233
>Z69662-1|CAA93499.1| 359|Caenorhabditis elegans Hypothetical
protein F56D5.1 protein.
Length = 359
Score = 28.3 bits (60), Expect = 0.77
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = -2
Query: 227 GRGASSGWKATASXRSAPSKRMPAPPGAHGARSTTGXPGGS-RSCNVHNAPTG 72
G + G K + + PPG G++ G PG S RS N+ P+G
Sbjct: 188 GTRGTPGMKGPPGDTIIAGEGIKGPPGLQGSQGPKGPPGNSGRSSNI-RGPSG 239
>Z66498-1|CAA91290.1| 304|Caenorhabditis elegans Hypothetical
protein M195.1 protein.
Length = 304
Score = 28.3 bits (60), Expect = 0.77
Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = -2
Query: 161 PAPPGAHGARSTTGXPG--GSRSCNVHNAPTGDS 66
P PPG GA T G PG G + P GD+
Sbjct: 232 PGPPGPQGAPGTDGQPGSAGQPGQDGPQGPAGDA 265
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 28.3 bits (60), Expect = 0.77
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -2
Query: 170 KRMPAPPGAHGARSTTGXPG 111
K P PPGA GA T G PG
Sbjct: 186 KGPPGPPGAPGAPGTPGEPG 205
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 28.3 bits (60), Expect = 0.77
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -2
Query: 170 KRMPAPPGAHGARSTTGXPG 111
K P PPGA GA T G PG
Sbjct: 186 KGPPGPPGAPGAPGTPGEPG 205
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 27.9 bits (59), Expect = 1.0
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = -2
Query: 221 GASSGWKATASXRSAPSKRMPAPPGAHGARSTTGXPGG 108
GA G A + S + P PPG G G PGG
Sbjct: 184 GAPGGPGAPGNTPSGGAAGPPGPPGPPGGPGNDGQPGG 221
>Z73972-2|CAA98258.1| 316|Caenorhabditis elegans Hypothetical
protein F15H10.2 protein.
Length = 316
Score = 27.9 bits (59), Expect = 1.0
Identities = 15/54 (27%), Positives = 21/54 (38%), Gaps = 4/54 (7%)
Frame = -2
Query: 227 GRGASSGWKATASXRSAPSKR----MPAPPGAHGARSTTGXPGGSRSCNVHNAP 78
G + G K + AP + +P PPG G G PG + + AP
Sbjct: 179 GPSGAPGQKGPSGAPGAPGQSGGAALPGPPGPAGPPGPAGQPGSNGNAGAPGAP 232
>Z73972-1|CAA98257.1| 316|Caenorhabditis elegans Hypothetical
protein F15H10.1 protein.
Length = 316
Score = 27.9 bits (59), Expect = 1.0
Identities = 15/54 (27%), Positives = 21/54 (38%), Gaps = 4/54 (7%)
Frame = -2
Query: 227 GRGASSGWKATASXRSAPSKR----MPAPPGAHGARSTTGXPGGSRSCNVHNAP 78
G + G K + AP + +P PPG G G PG + + AP
Sbjct: 179 GPSGAPGQKGPSGAPGAPGQSGGAALPGPPGPAGPPGPAGQPGSNGNAGAPGAP 232
>Z71178-2|CAA94875.1| 297|Caenorhabditis elegans Hypothetical
protein B0024.2 protein.
Length = 297
Score = 27.9 bits (59), Expect = 1.0
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Frame = -2
Query: 161 PAPPGAHGARSTTGXPG--GSRSCNVH 87
P PPG G R T+G PG G + VH
Sbjct: 108 PGPPGRPGQRGTSGSPGPRGQDNHQVH 134
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 27.9 bits (59), Expect = 1.0
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = -2
Query: 236 KSLGRGASSGWKATASXRSAPSK--RMPAPPGAHGARSTTGXPGGSRSCNVHNAPTGDS 66
+S R S+ + + S +P K R P+PP + S G P SRS + + GD+
Sbjct: 254 RSRSRSRSADNRKSRSPSRSPKKVDRSPSPPRGSRSPSEKGSPRRSRSASPMDNGDGDN 312
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 27.9 bits (59), Expect = 1.0
Identities = 18/58 (31%), Positives = 20/58 (34%), Gaps = 2/58 (3%)
Frame = -2
Query: 209 GWKATASXRSAPSKRMPAPPGAHGARSTTGXPG--GSRSCNVHNAPTGDSFATLFARP 42
G K R P + +P PG G G PG G P GDS L P
Sbjct: 444 GPKGEPGYRGTPGQSIPGLPGKDGKPGLDGAPGRKGENGLPGVRGPPGDSLNGLPGAP 501
Score = 24.6 bits (51), Expect = 9.5
Identities = 15/54 (27%), Positives = 21/54 (38%), Gaps = 4/54 (7%)
Frame = -2
Query: 227 GRGASSGWKATASXRSAPSKR----MPAPPGAHGARSTTGXPGGSRSCNVHNAP 78
GR S G+ P + +P PG G + G PG S + + AP
Sbjct: 890 GREGSPGFPGQDGLPGVPGMKGEDGLPGLPGVTGLKGDLGAPGQSGAPGLPGAP 943
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 27.9 bits (59), Expect = 1.0
Identities = 18/58 (31%), Positives = 20/58 (34%), Gaps = 2/58 (3%)
Frame = -2
Query: 209 GWKATASXRSAPSKRMPAPPGAHGARSTTGXPG--GSRSCNVHNAPTGDSFATLFARP 42
G K R P + +P PG G G PG G P GDS L P
Sbjct: 443 GPKGEPGYRGTPGQSIPGLPGKDGKPGLDGAPGRKGENGLPGVRGPPGDSLNGLPGAP 500
Score = 24.6 bits (51), Expect = 9.5
Identities = 15/54 (27%), Positives = 21/54 (38%), Gaps = 4/54 (7%)
Frame = -2
Query: 227 GRGASSGWKATASXRSAPSKR----MPAPPGAHGARSTTGXPGGSRSCNVHNAP 78
GR S G+ P + +P PG G + G PG S + + AP
Sbjct: 889 GREGSPGFPGQDGLPGVPGMKGEDGLPGLPGVTGLKGDLGAPGQSGAPGLPGAP 942
>X51623-1|CAA35955.1| 316|Caenorhabditis elegans collagen protein.
Length = 316
Score = 27.9 bits (59), Expect = 1.0
Identities = 15/54 (27%), Positives = 21/54 (38%), Gaps = 4/54 (7%)
Frame = -2
Query: 227 GRGASSGWKATASXRSAPSKR----MPAPPGAHGARSTTGXPGGSRSCNVHNAP 78
G + G K + AP + +P PPG G G PG + + AP
Sbjct: 179 GPSGAPGQKGPSGAPGAPGQSGGAALPGPPGPAGPPGPAGQPGSNGNAGAPGAP 232
>X51622-1|CAA35954.1| 316|Caenorhabditis elegans collagen protein.
Length = 316
Score = 27.9 bits (59), Expect = 1.0
Identities = 15/54 (27%), Positives = 21/54 (38%), Gaps = 4/54 (7%)
Frame = -2
Query: 227 GRGASSGWKATASXRSAPSKR----MPAPPGAHGARSTTGXPGGSRSCNVHNAP 78
G + G K + AP + +P PPG G G PG + + AP
Sbjct: 179 GPSGAPGQKGPSGAPGAPGQSGGAALPGPPGPAGPPGPAGQPGSNGNAGAPGAP 232
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 27.9 bits (59), Expect = 1.0
Identities = 18/58 (31%), Positives = 20/58 (34%), Gaps = 2/58 (3%)
Frame = -2
Query: 209 GWKATASXRSAPSKRMPAPPGAHGARSTTGXPG--GSRSCNVHNAPTGDSFATLFARP 42
G K R P + +P PG G G PG G P GDS L P
Sbjct: 443 GPKGEPGYRGTPGQSIPGLPGKDGKPGLDGAPGRKGENGLPGVRGPPGDSLNGLPGAP 500
Score = 24.6 bits (51), Expect = 9.5
Identities = 15/54 (27%), Positives = 21/54 (38%), Gaps = 4/54 (7%)
Frame = -2
Query: 227 GRGASSGWKATASXRSAPSKR----MPAPPGAHGARSTTGXPGGSRSCNVHNAP 78
GR S G+ P + +P PG G + G PG S + + AP
Sbjct: 889 GREGSPGFPGQDGLPGVPGMKGEDGLPGLPGVTGLKGDLGAPGQSGAPGLPGAP 942
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 27.9 bits (59), Expect = 1.0
Identities = 18/58 (31%), Positives = 20/58 (34%), Gaps = 2/58 (3%)
Frame = -2
Query: 209 GWKATASXRSAPSKRMPAPPGAHGARSTTGXPG--GSRSCNVHNAPTGDSFATLFARP 42
G K R P + +P PG G G PG G P GDS L P
Sbjct: 444 GPKGEPGYRGTPGQSIPGLPGKDGKPGLDGAPGRKGENGLPGVRGPPGDSLNGLPGAP 501
Score = 24.6 bits (51), Expect = 9.5
Identities = 15/54 (27%), Positives = 21/54 (38%), Gaps = 4/54 (7%)
Frame = -2
Query: 227 GRGASSGWKATASXRSAPSKR----MPAPPGAHGARSTTGXPGGSRSCNVHNAP 78
GR S G+ P + +P PG G + G PG S + + AP
Sbjct: 890 GREGSPGFPGQDGLPGVPGMKGEDGLPGLPGVTGLKGDLGAPGQSGAPGLPGAP 943
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV)
collagen protein.
Length = 1795
Score = 27.9 bits (59), Expect = 1.0
Identities = 18/58 (31%), Positives = 20/58 (34%), Gaps = 2/58 (3%)
Frame = -2
Query: 209 GWKATASXRSAPSKRMPAPPGAHGARSTTGXPG--GSRSCNVHNAPTGDSFATLFARP 42
G K R P + +P PG G G PG G P GDS L P
Sbjct: 480 GPKGEPGYRGTPGQSIPGLPGKDGKPGLDGAPGRKGENGLPGVRGPPGDSLNGLPGAP 537
Score = 24.6 bits (51), Expect = 9.5
Identities = 15/54 (27%), Positives = 21/54 (38%), Gaps = 4/54 (7%)
Frame = -2
Query: 227 GRGASSGWKATASXRSAPSKR----MPAPPGAHGARSTTGXPGGSRSCNVHNAP 78
GR S G+ P + +P PG G + G PG S + + AP
Sbjct: 926 GREGSPGFPGQDGLPGVPGMKGEDGLPGLPGVTGLKGDLGAPGQSGAPGLPGAP 979
>DQ178246-1|ABA18185.1| 482|Caenorhabditis elegans TPX2-related
alternative variant b protein.
Length = 482
Score = 27.9 bits (59), Expect = 1.0
Identities = 25/66 (37%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = -2
Query: 197 TASXRSAPSKRMPAPPGAHGARSTT-GXPGGSRSCNVHNAPTGDSFATLFARPVAATALA 21
TAS RS P P A A +T P S S N APT S T RP+ ATA
Sbjct: 281 TASRRSV----FPNKPAAAAANTTPIAPPRRSASANKATAPTSVSKLTPKIRPI-ATANR 335
Query: 20 AGVKRL 3
+ + R+
Sbjct: 336 SSILRM 341
>DQ178245-1|ABA18184.1| 507|Caenorhabditis elegans TPX2-related
alternative variant a protein.
Length = 507
Score = 27.9 bits (59), Expect = 1.0
Identities = 25/66 (37%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = -2
Query: 197 TASXRSAPSKRMPAPPGAHGARSTT-GXPGGSRSCNVHNAPTGDSFATLFARPVAATALA 21
TAS RS P P A A +T P S S N APT S T RP+ ATA
Sbjct: 281 TASRRSV----FPNKPAAAAANTTPIAPPRRSASANKATAPTSVSKLTPKIRPI-ATANR 335
Query: 20 AGVKRL 3
+ + R+
Sbjct: 336 SSILRM 341
>AC025716-4|AAL32238.1| 482|Caenorhabditis elegans Tpx2 (targeting
protein for xenopusklp2)-like protein 1, isoform b
protein.
Length = 482
Score = 27.9 bits (59), Expect = 1.0
Identities = 25/66 (37%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = -2
Query: 197 TASXRSAPSKRMPAPPGAHGARSTT-GXPGGSRSCNVHNAPTGDSFATLFARPVAATALA 21
TAS RS P P A A +T P S S N APT S T RP+ ATA
Sbjct: 281 TASRRSV----FPNKPAAAAANTTPIAPPRRSASANKATAPTSVSKLTPKIRPI-ATANR 335
Query: 20 AGVKRL 3
+ + R+
Sbjct: 336 SSILRM 341
>AC025716-2|AAK39617.1| 507|Caenorhabditis elegans Tpx2 (targeting
protein for xenopusklp2)-like protein 1, isoform a
protein.
Length = 507
Score = 27.9 bits (59), Expect = 1.0
Identities = 25/66 (37%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = -2
Query: 197 TASXRSAPSKRMPAPPGAHGARSTT-GXPGGSRSCNVHNAPTGDSFATLFARPVAATALA 21
TAS RS P P A A +T P S S N APT S T RP+ ATA
Sbjct: 281 TASRRSV----FPNKPAAAAANTTPIAPPRRSASANKATAPTSVSKLTPKIRPI-ATANR 335
Query: 20 AGVKRL 3
+ + R+
Sbjct: 336 SSILRM 341
>Z93390-7|CAB07677.1| 931|Caenorhabditis elegans Hypothetical
protein VT23B5.2 protein.
Length = 931
Score = 27.5 bits (58), Expect = 1.3
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = -2
Query: 236 KSLGRGASSGWKATASXRSAPSKRMPAP--PGAHGARSTTGXPGGSRSCNVHNAPTGDSF 63
K L +++ ++ S + S P P P A G+R+T GG++ V T +
Sbjct: 750 KRLKNSSTTATSSSVSGSGSASLTSPGPASPSAGGSRATNIDVGGAQFVRVLVQRTALTM 809
Query: 62 ATLFARP 42
T F RP
Sbjct: 810 HTAFNRP 816
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 27.5 bits (58), Expect = 1.3
Identities = 18/53 (33%), Positives = 19/53 (35%), Gaps = 3/53 (5%)
Frame = -2
Query: 221 GASSGWKATASXRSAPSKRMP---APPGAHGARSTTGXPGGSRSCNVHNAPTG 72
GAS A S P P PPG G T G PGG P+G
Sbjct: 144 GASGKGAAAPCEPSTPPPCQPCPAGPPGPPGPDGTPGEPGGPGPAGSPAGPSG 196
>AL032675-2|CAA21780.1| 931|Caenorhabditis elegans Hypothetical
protein VT23B5.2 protein.
Length = 931
Score = 27.5 bits (58), Expect = 1.3
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = -2
Query: 236 KSLGRGASSGWKATASXRSAPSKRMPAP--PGAHGARSTTGXPGGSRSCNVHNAPTGDSF 63
K L +++ ++ S + S P P P A G+R+T GG++ V T +
Sbjct: 750 KRLKNSSTTATSSSVSGSGSASLTSPGPASPSAGGSRATNIDVGGAQFVRVLVQRTALTM 809
Query: 62 ATLFARP 42
T F RP
Sbjct: 810 HTAFNRP 816
>AF025458-5|AAB70974.1| 298|Caenorhabditis elegans Squat protein 2
protein.
Length = 298
Score = 27.5 bits (58), Expect = 1.3
Identities = 16/57 (28%), Positives = 19/57 (33%), Gaps = 1/57 (1%)
Frame = -2
Query: 239 EKSLGRGASSGWKATASXRSAPSK-RMPAPPGAHGARSTTGXPGGSRSCNVHNAPTG 72
E L G S G + P P G G + G PGG C + P G
Sbjct: 241 EAGLDGGNSEGPQGPQGDAGRPGPVGEQGPQGPEGPQGPPGEPGGCEHCPIPRTPPG 297
Score = 25.8 bits (54), Expect = 4.1
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = -2
Query: 203 KATASXRSAPSKRMPAPPGAHGARSTTGXPGGSRSCNVHNAPTG 72
KA A+ P M PPG G G PG N P G
Sbjct: 186 KAGANGMQGPPGMM-GPPGRQGVSGPKGAPGRINQINGPAGPAG 228
>AC024805-16|AAK39336.1| 448|Caenorhabditis elegans Hypothetical
protein Y51H7C.1 protein.
Length = 448
Score = 27.5 bits (58), Expect = 1.3
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = -2
Query: 218 ASSGWKATASXRSAPSKRMPAPPGAHGARSTTGXPG 111
AS W S R + P PG G T G PG
Sbjct: 17 ASFNWPVDGSYRYSGGPGTPGGPGTPGGPGTPGGPG 52
>Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical
protein F33A8.9 protein.
Length = 346
Score = 27.1 bits (57), Expect = 1.8
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 161 PAPPGAHGARSTTGXPGGSRSCNVHNAPTG 72
P PPG G R T G P G ++ + + P G
Sbjct: 210 PGPPGPKGPRGTPG-PTGPKNFYITSGPPG 238
>Z81466-2|CAC42256.1| 954|Caenorhabditis elegans Hypothetical
protein C09H6.2b protein.
Length = 954
Score = 27.1 bits (57), Expect = 1.8
Identities = 15/49 (30%), Positives = 18/49 (36%)
Frame = -2
Query: 173 SKRMPAPPGAHGARSTTGXPGGSRSCNVHNAPTGDSFATLFARPVAATA 27
S P PP + G + G G + P G FA F P TA
Sbjct: 23 SSATPTPPPSKGGGAGGGGGGEQQQVPFQMIPPGHFFANPFLNPYIPTA 71
>Z81466-1|CAB03869.1| 982|Caenorhabditis elegans Hypothetical
protein C09H6.2a protein.
Length = 982
Score = 27.1 bits (57), Expect = 1.8
Identities = 15/49 (30%), Positives = 18/49 (36%)
Frame = -2
Query: 173 SKRMPAPPGAHGARSTTGXPGGSRSCNVHNAPTGDSFATLFARPVAATA 27
S P PP + G + G G + P G FA F P TA
Sbjct: 23 SSATPTPPPSKGGGAGGGGGGEQQQVPFQMIPPGHFFANPFLNPYIPTA 71
>Z69383-13|CAA93404.2| 181|Caenorhabditis elegans Hypothetical
protein F13E9.8 protein.
Length = 181
Score = 27.1 bits (57), Expect = 1.8
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -2
Query: 161 PAPPGAHGARSTTGXPGGSRSCN 93
P PG G R G PGG+ S N
Sbjct: 141 PGGPGGRGGRGGHGGPGGNDSSN 163
Score = 25.0 bits (52), Expect = 7.2
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = -2
Query: 161 PAPPGAHGARSTTGXPGGSRSCNVHNAPTGD 69
P PP HG G PGG H P G+
Sbjct: 131 PGPP--HGGPGGPGGPGGRGGRGGHGGPGGN 159
>AJ133374-1|CAB40208.1| 954|Caenorhabditis elegans lin-10 protein
protein.
Length = 954
Score = 27.1 bits (57), Expect = 1.8
Identities = 15/49 (30%), Positives = 18/49 (36%)
Frame = -2
Query: 173 SKRMPAPPGAHGARSTTGXPGGSRSCNVHNAPTGDSFATLFARPVAATA 27
S P PP + G + G G + P G FA F P TA
Sbjct: 23 SSATPTPPPSKGGGAGGGGGGEQQQVPFQMIPPGHFFANPFLNPYIPTA 71
>AF003139-6|AAB54156.1| 327|Caenorhabditis elegans Collagen protein
45 protein.
Length = 327
Score = 27.1 bits (57), Expect = 1.8
Identities = 15/53 (28%), Positives = 19/53 (35%), Gaps = 1/53 (1%)
Frame = -2
Query: 227 GRGASSGWKATASXRSAPSKR-MPAPPGAHGARSTTGXPGGSRSCNVHNAPTG 72
G+ + G K + P P PGA G + G GG C P G
Sbjct: 274 GKDGAGGEKGAPGDQGNPGPYGKPGQPGAPGPDGSAGEKGGCDHCPPPRTPPG 326
>AC006790-10|AAF60736.1| 371|Caenorhabditis elegans Collagen
protein 71 protein.
Length = 371
Score = 27.1 bits (57), Expect = 1.8
Identities = 16/54 (29%), Positives = 22/54 (40%), Gaps = 3/54 (5%)
Frame = -2
Query: 230 LGRGASSGWKATASXRSAPSKRMPAPPGA---HGARSTTGXPGGSRSCNVHNAP 78
+G ++G + S P+ PPGA G+R T G PG AP
Sbjct: 267 IGEPGATGETGENAENSEPTPGPQGPPGAIGPVGSRGTPGHPGEDGEAGAPGAP 320
>Z99281-48|CAE18025.2| 661|Caenorhabditis elegans Hypothetical
protein Y57G11C.42 protein.
Length = 661
Score = 26.6 bits (56), Expect = 2.3
Identities = 16/49 (32%), Positives = 19/49 (38%), Gaps = 2/49 (4%)
Frame = -2
Query: 182 SAPSKRMPAPPGAHGARSTTGXPGGSRSCNVHNAPTGDS--FATLFARP 42
S R PAP GAH + G G + GDS T F +P
Sbjct: 50 STDGSRRPAPSGAHDGNANIGGTGSVDNLRSAFGSAGDSDPSITSFEKP 98
>Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical
protein Y69H2.14 protein.
Length = 338
Score = 26.6 bits (56), Expect = 2.3
Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Frame = -2
Query: 227 GRGASSGWKATASXRSAPSKR-MPAPPGAHGARSTTGXPGGSRSCNVHNAP 78
G G G + AP+++ P PPG G G PG S + + P
Sbjct: 180 GAGGYGGPQQNDCQTCAPARQGAPGPPGPAGQPGQPGEPGHSDTSSTAGPP 230
>Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical
protein F57B1.3 protein.
Length = 313
Score = 26.6 bits (56), Expect = 2.3
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = -2
Query: 164 MPAPPGAHGARSTTGXPGGSRSCNVHNAP 78
+P PPG G +G PG + + AP
Sbjct: 201 LPGPPGPAGPPGPSGQPGSNGNAGAPGAP 229
>Z70284-9|CAA94280.1| 290|Caenorhabditis elegans Hypothetical
protein K07F5.11 protein.
Length = 290
Score = 26.6 bits (56), Expect = 2.3
Identities = 28/79 (35%), Positives = 35/79 (44%), Gaps = 9/79 (11%)
Frame = -2
Query: 227 GRGASSGWKAT--ASXRSAPSK-RMPAPPGAHGARSTT----GXPGGSRSCN-VHNAPTG 72
G GA S + A A AP+ M APP A G ST G P G+ + V AP G
Sbjct: 60 GGGAQSAYFAVGGAPVGGAPAAVPMGAPPPAGGGASTMTALGGAPSGASTMTAVGGAPRG 119
Query: 71 DSFAT-LFARPVAATALAA 18
S T + P A+ + A
Sbjct: 120 ASTMTAVGGAPTGASTMTA 138
>AL117204-40|CAL69746.1| 99|Caenorhabditis elegans Hypothetical
protein Y116A8C.49 protein.
Length = 99
Score = 26.6 bits (56), Expect = 2.3
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -2
Query: 200 ATASXRSAPSKRMPAPPGAHGARSTTGXPGGSRSCNVHNAPTG 72
A + R+A S + A PG+ G+ S + GGS+S + TG
Sbjct: 45 ACPTGRTATSDGLCALPGSSGSGSDSSGSGGSKSFSPSVLSTG 87
>AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen protein
101 protein.
Length = 314
Score = 26.6 bits (56), Expect = 2.3
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = -2
Query: 164 MPAPPGAHGARSTTGXPGGSRSCNVHNAP 78
+P PPG G +G PG + + AP
Sbjct: 202 LPGPPGPAGPPGPSGQPGSNGNAGAPGAP 230
>AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen
protein 143 protein.
Length = 319
Score = 26.6 bits (56), Expect = 2.3
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -2
Query: 161 PAPPGAHGARSTTGXPG 111
P PPG GAR G PG
Sbjct: 94 PGPPGQPGARGEAGLPG 110
>AF016687-1|AAC48094.2| 315|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 9 protein.
Length = 315
Score = 26.6 bits (56), Expect = 2.3
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = -2
Query: 161 PAPPGAHGARSTTGXPGGSRSCNVHNAPTGDSFATLFARPVAAT 30
P PPG G R G PG PTGD L P T
Sbjct: 175 PGPPGPPGVRGEPGSPG-------EKGPTGDRGKVLNGAPPGPT 211
>AC006712-10|AAK39322.2| 273|Caenorhabditis elegans Hypothetical
protein Y119C1B.1 protein.
Length = 273
Score = 26.6 bits (56), Expect = 2.3
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2
Query: 23 RERSPPRDERKVSRTSRRSAR 85
RER RD KVSR S +S+R
Sbjct: 70 RERKSSRDRNKVSRRSMKSSR 90
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 26.2 bits (55), Expect = 3.1
Identities = 15/66 (22%), Positives = 26/66 (39%)
Frame = -2
Query: 239 EKSLGRGASSGWKATASXRSAPSKRMPAPPGAHGARSTTGXPGGSRSCNVHNAPTGDSFA 60
EK L G+ S K+ + ++P+ A TTG + S + + D+
Sbjct: 312 EKKLRAGSPSTRKSPSRKSASPTPSRKGSSAGGAASGTTGASASATSATSGGSASSDASR 371
Query: 59 TLFARP 42
+ RP
Sbjct: 372 DKYTRP 377
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 26.2 bits (55), Expect = 3.1
Identities = 15/66 (22%), Positives = 26/66 (39%)
Frame = -2
Query: 239 EKSLGRGASSGWKATASXRSAPSKRMPAPPGAHGARSTTGXPGGSRSCNVHNAPTGDSFA 60
EK L G+ S K+ + ++P+ A TTG + S + + D+
Sbjct: 312 EKKLRAGSPSTRKSPSRKSASPTPSRKGSSAGGAASGTTGASASATSATSGGSASSDASR 371
Query: 59 TLFARP 42
+ RP
Sbjct: 372 DKYTRP 377
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 26.2 bits (55), Expect = 3.1
Identities = 15/66 (22%), Positives = 26/66 (39%)
Frame = -2
Query: 239 EKSLGRGASSGWKATASXRSAPSKRMPAPPGAHGARSTTGXPGGSRSCNVHNAPTGDSFA 60
EK L G+ S K+ + ++P+ A TTG + S + + D+
Sbjct: 312 EKKLRAGSPSTRKSPSRKSASPTPSRKGSSAGGAASGTTGASASATSATSGGSASSDASR 371
Query: 59 TLFARP 42
+ RP
Sbjct: 372 DKYTRP 377
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 26.2 bits (55), Expect = 3.1
Identities = 15/66 (22%), Positives = 26/66 (39%)
Frame = -2
Query: 239 EKSLGRGASSGWKATASXRSAPSKRMPAPPGAHGARSTTGXPGGSRSCNVHNAPTGDSFA 60
EK L G+ S K+ + ++P+ A TTG + S + + D+
Sbjct: 312 EKKLRAGSPSTRKSPSRKSASPTPSRKGSSAGGAASGTTGASASATSATSGGSASSDASR 371
Query: 59 TLFARP 42
+ RP
Sbjct: 372 DKYTRP 377
>Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical
protein C09G5.5 protein.
Length = 317
Score = 26.2 bits (55), Expect = 3.1
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -2
Query: 161 PAPPGAHGARSTTGXPG 111
P PPGA G R G PG
Sbjct: 94 PGPPGASGDRGLDGQPG 110
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 26.2 bits (55), Expect = 3.1
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -2
Query: 161 PAPPGAHGARSTTGXPG 111
P PPGA G T G PG
Sbjct: 161 PGPPGAPGDAGTNGAPG 177
Score = 25.8 bits (54), Expect = 4.1
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = -2
Query: 221 GASSGWKATASXRSAPSKRMPAPPGAHGARSTTGXPG 111
GA A A K P PPG+ GA G PG
Sbjct: 174 GAPGAPGGDAPPGEAGPKGPPGPPGSPGAPGEPGRPG 210
Score = 25.0 bits (52), Expect = 7.2
Identities = 12/37 (32%), Positives = 15/37 (40%)
Frame = -2
Query: 176 PSKRMPAPPGAHGARSTTGXPGGSRSCNVHNAPTGDS 66
P P P G G G PG + + AP GD+
Sbjct: 147 PPPCKPCPDGPAGPPGPPGAPGDAGTNGAPGAPGGDA 183
>AL032634-3|CAE45092.1| 412|Caenorhabditis elegans Hypothetical
protein Y39G8C.4 protein.
Length = 412
Score = 26.2 bits (55), Expect = 3.1
Identities = 16/54 (29%), Positives = 20/54 (37%), Gaps = 2/54 (3%)
Frame = -2
Query: 227 GRGASSGWKATASXRSAPSKRMPAPPGAHGARSTTGXPGGS-RSCNVH-NAPTG 72
G + GW + + P PPG G G PG S N+H P G
Sbjct: 193 GEPGAGGWPGQRGENAKSYRNFPGPPGPPG---PVGPPGDSGERGNIHEGGPPG 243
>AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen protein
141 protein.
Length = 314
Score = 26.2 bits (55), Expect = 3.1
Identities = 17/48 (35%), Positives = 20/48 (41%)
Frame = -2
Query: 161 PAPPGAHGARSTTGXPGGSRSCNVHNAPTGDSFATLFARPVAATALAA 18
P PGA G G PG + AP GD A P + A+AA
Sbjct: 241 PGAPGAPGHPGQAGTPGTPGAPGNSGAPGGD--AAYCPCPARSAAMAA 286
>AF003150-3|AAB54214.1| 208|Caenorhabditis elegans Collagen protein
55 protein.
Length = 208
Score = 26.2 bits (55), Expect = 3.1
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -2
Query: 161 PAPPGAHGARSTTGXPGGSRS 99
P PG GA+ T G PG S S
Sbjct: 155 PGQPGQAGAQGTPGAPGNSGS 175
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 25.8 bits (54), Expect = 4.1
Identities = 16/54 (29%), Positives = 20/54 (37%), Gaps = 3/54 (5%)
Frame = -2
Query: 230 LGRGASSGWKATASXRSAPSKRMPA---PPGAHGARSTTGXPGGSRSCNVHNAP 78
+G G +P+K PA PPG G G PG S + AP
Sbjct: 179 IGPPGPPGQAGAPGEPGSPAKSEPAVPGPPGPPGQAGQQGPPGPPGSNGIDGAP 232
>Z74037-4|CAA98490.1| 295|Caenorhabditis elegans Hypothetical
protein F57B7.3 protein.
Length = 295
Score = 25.8 bits (54), Expect = 4.1
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -2
Query: 227 GRGASSGWKAT-ASXRSAPSKRMPAPPGAHGARSTTGXPG 111
G+ + G A AS ++ S+ +P P GA G + G PG
Sbjct: 111 GQPGNVGQNAVVASIAASTSECIPCPAGAPGPQGPDGAPG 150
>Z70681-1|CAA94580.1| 307|Caenorhabditis elegans Hypothetical
protein C30F2.1 protein.
Length = 307
Score = 25.8 bits (54), Expect = 4.1
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -2
Query: 155 PPGAHGARSTTGXPGGSRSCNVHNAPTGDS 66
PPG G G PG H P GDS
Sbjct: 260 PPGYRGDNGRRGAPGLPGRTGRHGKPGGDS 289
>X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein.
Length = 318
Score = 25.8 bits (54), Expect = 4.1
Identities = 14/52 (26%), Positives = 19/52 (36%)
Frame = -2
Query: 227 GRGASSGWKATASXRSAPSKRMPAPPGAHGARSTTGXPGGSRSCNVHNAPTG 72
G G K S + PPG G R G PG + + ++ P G
Sbjct: 192 GEQGEPGIKGPPGDDSIGGTGIKGPPGPPGPRGPKGPPGSNGLPSQNSGPPG 243
Score = 25.8 bits (54), Expect = 4.1
Identities = 12/26 (46%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
Frame = -2
Query: 161 PAPPGAHGARSTTGXPGG--SRSCNV 90
P PPG G +G PGG SC V
Sbjct: 260 PGPPGPFGPPGDSGEPGGHCPSSCGV 285
>U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protein
73 protein.
Length = 285
Score = 25.8 bits (54), Expect = 4.1
Identities = 16/54 (29%), Positives = 20/54 (37%), Gaps = 1/54 (1%)
Frame = -2
Query: 227 GRGASSGWKATASXRSAPSKRMP-APPGAHGARSTTGXPGGSRSCNVHNAPTGD 69
G+ + G + AP P PPG G T G PG AP G+
Sbjct: 159 GQPGAPGEQGPNGRPGAPGAPGPQGPPGTAGNDGTPGQPGAPGQVRTVPAPPGN 212
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 25.8 bits (54), Expect = 4.1
Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Frame = -2
Query: 152 PGAHGARSTTGXPGGSRSCNVHNAP--TGDSFA 60
PG HG G PG SC+ H P TG +A
Sbjct: 269 PGPHGGTGPRGPPGQPGSCD-HCPPPRTGPGYA 300
>U50312-9|AAA92325.1| 294|Caenorhabditis elegans Collagen protein
10 protein.
Length = 294
Score = 25.8 bits (54), Expect = 4.1
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -2
Query: 161 PAPPGAHGARSTTGXPG 111
P PPG GA T G PG
Sbjct: 106 PGPPGQPGAPGTPGAPG 122
>U50312-8|AAA92324.1| 294|Caenorhabditis elegans Collagen protein
145 protein.
Length = 294
Score = 25.8 bits (54), Expect = 4.1
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -2
Query: 161 PAPPGAHGARSTTGXPG 111
P PPG GA T G PG
Sbjct: 106 PGPPGQPGAPGTPGAPG 122
>U50312-7|AAA92323.2| 306|Caenorhabditis elegans Collagen protein
144 protein.
Length = 306
Score = 25.8 bits (54), Expect = 4.1
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -2
Query: 161 PAPPGAHGARSTTGXPG 111
P PPG GA T G PG
Sbjct: 118 PGPPGQPGAPGTPGAPG 134
>U41748-3|AAA83336.1| 452|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 8 protein.
Length = 452
Score = 25.8 bits (54), Expect = 4.1
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -2
Query: 161 PAPPGAHGARSTTGXPG 111
P P GA G R TG PG
Sbjct: 146 PGPRGAQGERGMTGNPG 162
>U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 7 protein.
Length = 318
Score = 25.8 bits (54), Expect = 4.1
Identities = 14/52 (26%), Positives = 19/52 (36%)
Frame = -2
Query: 227 GRGASSGWKATASXRSAPSKRMPAPPGAHGARSTTGXPGGSRSCNVHNAPTG 72
G G K S + PPG G R G PG + + ++ P G
Sbjct: 192 GEQGEPGIKGPPGDDSIGGTGIKGPPGPPGPRGPKGPPGSNGLPSQNSGPPG 243
Score = 25.8 bits (54), Expect = 4.1
Identities = 12/26 (46%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
Frame = -2
Query: 161 PAPPGAHGARSTTGXPGG--SRSCNV 90
P PPG G +G PGG SC V
Sbjct: 260 PGPPGPFGPPGDSGEPGGHCPSSCGV 285
>U41011-8|AAA82291.2| 321|Caenorhabditis elegans Collagen protein
114 protein.
Length = 321
Score = 25.8 bits (54), Expect = 4.1
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = -2
Query: 164 MPAPPGAHGARSTTGXP--GGSRSCNVHNAPTGDS 66
+P PPG G G P GG++ N + P G S
Sbjct: 248 IPGPPGPPGMAGPDGIPGMGGAKGQNGPDGPPGAS 282
>AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen protein
48 protein.
Length = 285
Score = 25.8 bits (54), Expect = 4.1
Identities = 14/45 (31%), Positives = 16/45 (35%), Gaps = 1/45 (2%)
Frame = -2
Query: 227 GRGASSGWKATASXRSAPSKR-MPAPPGAHGARSTTGXPGGSRSC 96
G G A P +R P PPG G + G G SC
Sbjct: 229 GSPGQDGSNGDAGVAGEPGQRGPPGPPGQAGTPGSPGDAGSPGSC 273
Score = 24.6 bits (51), Expect = 9.5
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 100 EREPPGXPVVERAPWAPGGAG 162
+R PPG P P +PG AG
Sbjct: 248 QRGPPGPPGQAGTPGSPGDAG 268
>AC006603-1|AAF39749.1| 772|Caenorhabditis elegans Hypothetical
protein B0524.4 protein.
Length = 772
Score = 25.8 bits (54), Expect = 4.1
Identities = 15/52 (28%), Positives = 21/52 (40%)
Frame = -2
Query: 227 GRGASSGWKATASXRSAPSKRMPAPPGAHGARSTTGXPGGSRSCNVHNAPTG 72
G+ + G KA S + +K P GA G GG++ AP G
Sbjct: 721 GKKLAEGGKAGNSGGKSGAKNGPGKAGAKNEPGKAGAGGGAKKEEEGGAPIG 772
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 25.4 bits (53), Expect = 5.4
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = -2
Query: 227 GRGASSGWKATASXRSAPSKRMPAPPGAHGARSTTGXPG 111
G S G ++ +S A P PPG GA PG
Sbjct: 158 GEAGSPGTRSISSPGPAGPAGPPGPPGPDGAPGGGSGPG 196
>Z82080-2|CAB04951.1| 428|Caenorhabditis elegans Hypothetical
protein W09G3.2 protein.
Length = 428
Score = 25.4 bits (53), Expect = 5.4
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -2
Query: 164 MPAPPGAHGARSTTGXPGGSRSCNV 90
+P+PP H A +T G P R ++
Sbjct: 10 VPSPPSPHPAGTTIGGPNSKRYSDI 34
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical
protein F14F7.1 protein.
Length = 305
Score = 25.4 bits (53), Expect = 5.4
Identities = 17/54 (31%), Positives = 20/54 (37%)
Frame = -2
Query: 227 GRGASSGWKATASXRSAPSKRMPAPPGAHGARSTTGXPGGSRSCNVHNAPTGDS 66
GR S G + + R P PPG G R G PG S P D+
Sbjct: 164 GRPGSDGQPGRPATGGGAAPR-PGPPGPKGPR---GAPGNSGRAGAPGQPGNDA 213
>Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.6 protein.
Length = 316
Score = 25.4 bits (53), Expect = 5.4
Identities = 13/47 (27%), Positives = 20/47 (42%)
Frame = -2
Query: 233 SLGRGASSGWKATASXRSAPSKRMPAPPGAHGARSTTGXPGGSRSCN 93
S G+ + G + + +P P GA G++ G PG S N
Sbjct: 182 SPGQAGAPGNPGSPGKSGQRGRGLPGPSGAPGSQGPPGAPGQPGSGN 228
Score = 24.6 bits (51), Expect = 9.5
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -2
Query: 161 PAPPGAHGARSTTGXPG 111
P PPGA G + G PG
Sbjct: 96 PGPPGASGDKGHDGQPG 112
>Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical
protein C15A11.1 protein.
Length = 303
Score = 25.4 bits (53), Expect = 5.4
Identities = 13/40 (32%), Positives = 14/40 (35%)
Frame = -2
Query: 227 GRGASSGWKATASXRSAPSKRMPAPPGAHGARSTTGXPGG 108
G +G A A P PPG G G PGG
Sbjct: 192 GPAGPAGEDAAAPESPPGPPGPPGPPGKDGEAGAPGAPGG 231
Score = 24.6 bits (51), Expect = 9.5
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +1
Query: 109 PPGXPVVERAPWAPGGAGMRFEGAERXDAVAF 204
PPG P + AP PG AG E A +F
Sbjct: 71 PPGAPGEDGAPGEPGTAGTDGENGAAGVADSF 102
Score = 24.6 bits (51), Expect = 9.5
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +1
Query: 109 PPGXPVVERAPWAPGGAGMRFEGAERXDA 195
PPG AP APGG G +GA DA
Sbjct: 216 PPGKDGEAGAPGAPGGPGT--DGAPGVDA 242
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 25.4 bits (53), Expect = 5.4
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = -2
Query: 227 GRGASSGWKATASXRSAPSKRMPAPPGAHGARSTTGXPG 111
G S G ++ +S A P PPG GA PG
Sbjct: 158 GEAGSPGTRSISSPGPAGPAGPPGPPGPDGAPGGGSGPG 196
>Z73969-6|CAA98236.1| 295|Caenorhabditis elegans Hypothetical
protein C12D8.8 protein.
Length = 295
Score = 25.4 bits (53), Expect = 5.4
Identities = 12/41 (29%), Positives = 17/41 (41%)
Frame = -2
Query: 233 SLGRGASSGWKATASXRSAPSKRMPAPPGAHGARSTTGXPG 111
S+GR G+ P +P PPG +G +G G
Sbjct: 165 SMGRAGQPGYSGPRGNDGFPG--LPGPPGENGQPGQSGKDG 203
Score = 24.6 bits (51), Expect = 9.5
Identities = 17/65 (26%), Positives = 24/65 (36%)
Frame = -2
Query: 227 GRGASSGWKATASXRSAPSKRMPAPPGAHGARSTTGXPGGSRSCNVHNAPTGDSFATLFA 48
GR + G + + + ++ P P G G G PG + P D F F
Sbjct: 206 GRNGADGKRGYGAPGAPGAQGKPGPSGPPGI---DGYPGQNGWKGQQGVPGQDDFPGTFG 262
Query: 47 RPVAA 33
P AA
Sbjct: 263 EPGAA 267
>Z72506-3|CAA96617.1| 310|Caenorhabditis elegans Hypothetical
protein F07A5.2 protein.
Length = 310
Score = 25.4 bits (53), Expect = 5.4
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -2
Query: 239 EKSLGRGASSGWKATASXRSAPSKR 165
+ L R +SSG+ T S RS SKR
Sbjct: 67 KSKLPRSSSSGFSGTGSERSISSKR 91
>Z71178-1|CAA94874.1| 297|Caenorhabditis elegans Hypothetical
protein B0024.1 protein.
Length = 297
Score = 25.4 bits (53), Expect = 5.4
Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Frame = -2
Query: 161 PAPPGAHGARSTTGXPG--GSRSCNVHNAP 78
P PPG G R G PG G + N AP
Sbjct: 109 PGPPGHPGQRGIPGIPGRNGQDNYNTIRAP 138
>Z69659-1|CAA93483.1| 329|Caenorhabditis elegans Hypothetical
protein F07C6.1 protein.
Length = 329
Score = 25.4 bits (53), Expect = 5.4
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +3
Query: 21 RESGRRHGTSEKCRE 65
R SG+RH E+CRE
Sbjct: 11 RNSGKRHRACERCRE 25
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 25.4 bits (53), Expect = 5.4
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 155 PPGAHGARSTTGXPGG 108
PPGA GA G PGG
Sbjct: 251 PPGAAGAPGADGNPGG 266
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 25.4 bits (53), Expect = 5.4
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 155 PPGAHGARSTTGXPGG 108
PPGA GA G PGG
Sbjct: 251 PPGAAGAPGADGNPGG 266
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein
20 protein.
Length = 288
Score = 25.4 bits (53), Expect = 5.4
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = -2
Query: 170 KRMPAPPGAHGARSTTGXPGGSRSCNVHNAPTGDS 66
K P PPG HG G GG R P G++
Sbjct: 158 KGPPGPPGGHGEPGPAGR-GGPRGPPGPGGPQGEA 191
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 25.4 bits (53), Expect = 5.4
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 155 PPGAHGARSTTGXPGG 108
PPGA GA G PGG
Sbjct: 251 PPGAAGAPGADGNPGG 266
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 25.4 bits (53), Expect = 5.4
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 155 PPGAHGARSTTGXPGG 108
PPGA GA G PGG
Sbjct: 251 PPGAAGAPGADGNPGG 266
>AF100669-11|AAK39270.2| 737|Caenorhabditis elegans Dipeptidyl
peptidase four (iv)family protein 5 protein.
Length = 737
Score = 25.4 bits (53), Expect = 5.4
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +1
Query: 142 WAPGGAGMRFEGAERXD 192
WAPG AG+ F G E D
Sbjct: 250 WAPGDAGVVFFGLEEQD 266
>Z82083-5|CAB04973.1| 298|Caenorhabditis elegans Hypothetical
protein ZK1010.7 protein.
Length = 298
Score = 25.0 bits (52), Expect = 7.2
Identities = 11/39 (28%), Positives = 16/39 (41%)
Frame = -2
Query: 227 GRGASSGWKATASXRSAPSKRMPAPPGAHGARSTTGXPG 111
G G G + + + +P PGA G +G PG
Sbjct: 192 GEGGRDGPRGEQGRPAISTPALPGDPGAPGEPGPSGLPG 230
>Z54237-4|CAN86899.1| 297|Caenorhabditis elegans Hypothetical
protein T11B7.3a protein.
Length = 297
Score = 25.0 bits (52), Expect = 7.2
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -2
Query: 164 MPAPPGAHGARSTTGXPGG 108
+P P GA G T G PGG
Sbjct: 248 VPGPRGAPGQPGTIGVPGG 266
Score = 24.6 bits (51), Expect = 9.5
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -2
Query: 161 PAPPGAHGARSTTGXPG 111
P PPG GA G PG
Sbjct: 98 PGPPGPQGAPGAPGTPG 114
>Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical
protein ZC373.7 protein.
Length = 297
Score = 25.0 bits (52), Expect = 7.2
Identities = 20/54 (37%), Positives = 21/54 (38%), Gaps = 5/54 (9%)
Frame = -2
Query: 161 PAPPGAHGARSTTGXPG--GSRSCNVH---NAPTGDSFATLFARPVAATALAAG 15
P PPG G T G PG G S N PT S A A A +AG
Sbjct: 108 PGPPGPAGQPGTPGAPGPKGQDSTTTFAPINCPTAPSDCIKCAPGPAGPAGSAG 161
>U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protein
14 protein.
Length = 345
Score = 25.0 bits (52), Expect = 7.2
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +1
Query: 109 PPGXPVVERAPWAPGGAG 162
PPG P + P APG AG
Sbjct: 211 PPGQPGPDGPPGAPGNAG 228
>U41624-5|AAF99941.1| 314|Caenorhabditis elegans Collagen protein
174 protein.
Length = 314
Score = 25.0 bits (52), Expect = 7.2
Identities = 16/55 (29%), Positives = 21/55 (38%), Gaps = 2/55 (3%)
Frame = -2
Query: 227 GRGASSGWKATASXRSAPSK--RMPAPPGAHGARSTTGXPGGSRSCNVHNAPTGD 69
G ++G A P K +PAP G GA G PG + + P D
Sbjct: 212 GAPGANGNPGNAGTPGIPGKTIEVPAPAGPAGAPGPAGPPGTAGTPGSQGQPGKD 266
>M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein.
Length = 326
Score = 25.0 bits (52), Expect = 7.2
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +1
Query: 109 PPGXPVVERAPWAPGGAG 162
PPG P + P APG AG
Sbjct: 192 PPGQPGPDGPPGAPGNAG 209
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 25.0 bits (52), Expect = 7.2
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = -2
Query: 185 RSAPSKRMPAPPGAHGARSTTGXPGG 108
+S P PP A GA G PGG
Sbjct: 383 QSGPPGAFAPPPSAFGAPQGPGGPGG 408
>AF067616-11|AAC19194.2| 627|Caenorhabditis elegans Collagen
protein 99 protein.
Length = 627
Score = 25.0 bits (52), Expect = 7.2
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -2
Query: 164 MPAPPGAHGARSTTGXPG 111
MP PPG G + G PG
Sbjct: 91 MPGPPGPAGPKGLRGYPG 108
Score = 24.6 bits (51), Expect = 9.5
Identities = 16/50 (32%), Positives = 20/50 (40%)
Frame = -2
Query: 227 GRGASSGWKATASXRSAPSKRMPAPPGAHGARSTTGXPGGSRSCNVHNAP 78
G G SG + + R P +P PPG G G PG S + P
Sbjct: 467 GAGEISG--SQSGPRGPPG--LPGPPGEKGDLGPPGLPGQPGSLGLPGPP 512
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 25.0 bits (52), Expect = 7.2
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = -2
Query: 155 PPGAHGARSTTGXPGGSRSCNVHNAPTGDS 66
PPG GA T G PG S P D+
Sbjct: 142 PPGPSGAPGTDGNPGNDGSPGNPGTPGQDA 171
Score = 25.0 bits (52), Expect = 7.2
Identities = 12/32 (37%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Frame = -2
Query: 161 PAPPGAHGARSTTGXPG--GSRSCNVHNAPTG 72
P PPG G + G PG G+ N P G
Sbjct: 191 PGPPGKQGPKGPNGEPGAPGTPGGNALPGPPG 222
Score = 24.6 bits (51), Expect = 9.5
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +1
Query: 109 PPGXPVVERAPWAPGGAG 162
PPG P ++ AP PG G
Sbjct: 286 PPGDPGIDGAPGNPGSPG 303
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 25.0 bits (52), Expect = 7.2
Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 5/42 (11%)
Frame = -2
Query: 182 SAPSKRMPAPPGAHGARSTTGXPG-----GSRSCNVHNAPTG 72
S P P PPG G G PG G+ N N+P G
Sbjct: 209 SPPPPGPPGPPGPPGNDGQPGAPGQDGQPGAPGTNTVNSPGG 250
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 24.6 bits (51), Expect = 9.5
Identities = 13/29 (44%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Frame = -2
Query: 194 ASXRSAPSKR-MPAPPGAHGARSTTGXPG 111
AS +AP P PPG GA G PG
Sbjct: 242 ASPTAAPGAAGPPGPPGPAGAPGPDGNPG 270
>Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical
protein T16G1.1 protein.
Length = 695
Score = 24.6 bits (51), Expect = 9.5
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = -2
Query: 218 ASSGWKATASXRSAPSKRMPAPPGAHGARSTTGXPGGSRSCNVHNAPTGDS 66
+SSG + ++ RS P P PP + GA GG+R N N+ ++
Sbjct: 522 SSSG--SGSNRRSGPPPP-PPPPRSSGANGNRNGGGGNRRNNNKNSSNSNN 569
>Z81540-9|CAD89742.1| 740|Caenorhabditis elegans Hypothetical
protein F46B3.17 protein.
Length = 740
Score = 24.6 bits (51), Expect = 9.5
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 109 PPGXPVVERAPWAPGGAGMRFEGAE 183
P G P + +P APG AG+R + E
Sbjct: 353 PIGPPGLPGSPGAPGAAGIRGKRGE 377
>Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.5 protein.
Length = 316
Score = 24.6 bits (51), Expect = 9.5
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -2
Query: 161 PAPPGAHGARSTTGXPG 111
P PPGA G + G PG
Sbjct: 96 PGPPGASGDKGHDGQPG 112
Score = 24.6 bits (51), Expect = 9.5
Identities = 13/47 (27%), Positives = 19/47 (40%)
Frame = -2
Query: 233 SLGRGASSGWKATASXRSAPSKRMPAPPGAHGARSTTGXPGGSRSCN 93
S G+ + G + + +P P GA G + G PG S N
Sbjct: 182 SPGQAGAPGNPGSPGKSGQRGRGLPGPSGAPGPQGPPGAPGQPGSGN 228
>Z77132-3|CAB00860.1| 310|Caenorhabditis elegans Hypothetical
protein F54D1.3 protein.
Length = 310
Score = 24.6 bits (51), Expect = 9.5
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +1
Query: 109 PPGXPVVERAPWAPGGAGMRFEGAERXDAVAFHPLLAPRPS 231
PPG P AP PG G R G + V + P+ P+ S
Sbjct: 121 PPGPPGQPGAPGVPGAPGPR--GGD--STVTYAPINCPQVS 157
>Z77132-2|CAB00858.1| 294|Caenorhabditis elegans Hypothetical
protein F54D1.2 protein.
Length = 294
Score = 24.6 bits (51), Expect = 9.5
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +1
Query: 109 PPGXPVVERAPWAPGGAGMRFEGAERXDAVAFHPLLAPRPS 231
PPG P AP PG G R G + V + P+ P+ S
Sbjct: 105 PPGPPGQPGAPGVPGAPGPR--GGD--STVTYAPINCPQVS 141
>Z72509-5|CAA96649.1| 294|Caenorhabditis elegans Hypothetical
protein F32G8.5 protein.
Length = 294
Score = 24.6 bits (51), Expect = 9.5
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -2
Query: 161 PAPPGAHGARSTTGXPG 111
P PPGA G G PG
Sbjct: 96 PGPPGAAGTNGEDGSPG 112
>Z71262-8|CAA95812.1| 302|Caenorhabditis elegans Hypothetical
protein F22D6.10 protein.
Length = 302
Score = 24.6 bits (51), Expect = 9.5
Identities = 12/39 (30%), Positives = 13/39 (33%)
Frame = -2
Query: 227 GRGASSGWKATASXRSAPSKRMPAPPGAHGARSTTGXPG 111
GR S G R P PG+ G G PG
Sbjct: 191 GRDGSPGRPGRDGTRGVGQPGSPGQPGSRGPEGPRGQPG 229
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 24.6 bits (51), Expect = 9.5
Identities = 13/29 (44%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Frame = -2
Query: 194 ASXRSAPSKR-MPAPPGAHGARSTTGXPG 111
AS +AP P PPG GA G PG
Sbjct: 241 ASPTAAPGAAGPPGPPGPAGAPGPDGNPG 269
>Z70208-1|CAA94141.1| 339|Caenorhabditis elegans Hypothetical
protein F54B11.1 protein.
Length = 339
Score = 24.6 bits (51), Expect = 9.5
Identities = 18/54 (33%), Positives = 20/54 (37%), Gaps = 2/54 (3%)
Frame = -2
Query: 227 GRGASSGWKATASXRSAPSKRMPAPPGAHGARSTTG--XPGGSRSCNVHNAPTG 72
G GAS T S + P PPG +G G P G NV P G
Sbjct: 171 GLGASPCQPRTQSQCQQCPQGPPGPPGLNGQPGLPGGMGPPGQSMSNVLPGPLG 224
>Z54237-5|CAN86900.1| 273|Caenorhabditis elegans Hypothetical
protein T11B7.3b protein.
Length = 273
Score = 24.6 bits (51), Expect = 9.5
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -2
Query: 161 PAPPGAHGARSTTGXPG 111
P PPG GA G PG
Sbjct: 98 PGPPGPQGAPGAPGTPG 114
>U40060-2|AAP82656.1| 108|Caenorhabditis elegans Collagen protein
172, isoform b protein.
Length = 108
Score = 24.6 bits (51), Expect = 9.5
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -2
Query: 164 MPAPPGAHGARSTTGXPG 111
+P PG GAR G PG
Sbjct: 41 LPGTPGKRGARGMDGLPG 58
>U40060-1|AAA81141.1| 341|Caenorhabditis elegans Collagen protein
172, isoform a protein.
Length = 341
Score = 24.6 bits (51), Expect = 9.5
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -2
Query: 164 MPAPPGAHGARSTTGXPG 111
+P PG GAR G PG
Sbjct: 274 LPGTPGKRGARGMDGLPG 291
>M25478-1|AAA27992.1| 168|Caenorhabditis elegans collagen protein.
Length = 168
Score = 24.6 bits (51), Expect = 9.5
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -2
Query: 161 PAPPGAHGARSTTGXPG 111
P PPGA G + G PG
Sbjct: 83 PGPPGASGDKGHDGQPG 99
>AF039720-3|AAB96697.1| 281|Caenorhabditis elegans Collagen protein
54 protein.
Length = 281
Score = 24.6 bits (51), Expect = 9.5
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -2
Query: 161 PAPPGAHGARSTTGXPGGSRSCNVHNAPTGDSFAT 57
P P G GA + G PG + P GD+ AT
Sbjct: 149 PGPDGQPGAPGSNGNPGSAGEQGSEGEP-GDAGAT 182
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.314 0.133 0.427
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,000,050
Number of Sequences: 27780
Number of extensions: 74489
Number of successful extensions: 1171
Number of sequences better than 10.0: 117
Number of HSP's better than 10.0 without gapping: 469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1126
length of database: 12,740,198
effective HSP length: 59
effective length of database: 11,101,178
effective search space used: 222023560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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