Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte25g05
(662 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC17A5.07c |ulp2||SUMO deconjugating cysteine peptidase Ulp2 |... 34 0.021
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 33 0.049
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 32 0.085
SPBC14F5.02 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 29 0.60
SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 29 0.79
SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyce... 28 1.0
SPBC1861.01c |cnp3|SPBC56F2.13|CENP-C|Schizosaccharomyces pombe|... 27 1.8
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 27 1.8
SPBC530.04 |mod5||Tea1 anchoring protein Mod5|Schizosaccharomyce... 27 1.8
SPAC19A8.04 |erg5||C-22 sterol desaturase Erg5 |Schizosaccharomy... 27 2.4
SPBC25B2.07c |mug164||microtubule-associated protein|Schizosacch... 27 2.4
SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr 1|... 27 3.2
SPBP4H10.11c |||long-chain-fatty-acid-CoA ligase |Schizosaccharo... 27 3.2
SPAC15A10.13 |ppk3||serine/threonine protein kinase Ppk3|Schizos... 26 4.2
SPAC1805.10 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 4.2
SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyc... 26 4.2
SPAC25A8.03c ||SPAC3C7.15c|DUF185 protein|Schizosaccharomyces po... 26 4.2
SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccha... 26 4.2
SPAC12B10.14c |ppk2||serine/threonine protein kinase Ppk2 |Schiz... 26 4.2
SPAC3H8.02 |||sec14 cytosolic factor family|Schizosaccharomyces ... 26 5.6
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 26 5.6
SPBC29B5.01 |atf1|mts1, sss1, gad7|transcription factor Atf1|Sch... 25 7.4
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 25 7.4
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 25 7.4
SPBPB7E8.02 |||PSP1 family protein|Schizosaccharomyces pombe|chr... 25 7.4
SPBC1703.14c |top1||DNA topoisomerase I|Schizosaccharomyces pomb... 25 7.4
SPBC36B7.09 |gcn2|ppk28, ppk28, SPBP18G5.01|eIF2 alpha kinase Gc... 25 7.4
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 9.7
SPCC1919.12c |||aminopeptidase |Schizosaccharomyces pombe|chr 3|... 25 9.7
SPAC1A6.04c |plb1||phospholipase B homolog Plb1|Schizosaccharomy... 25 9.7
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 25 9.7
>SPAC17A5.07c |ulp2||SUMO deconjugating cysteine peptidase Ulp2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 652
Score = 33.9 bits (74), Expect = 0.021
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +2
Query: 239 QRSFISIHSTD-QPCLADVDTASNLDDCNVEVLSLNEVFPSTSEESLSNDDSPVRRKKNA 415
+R + + STD + A V SN DC + L E+F T E+ ++N R+ +A
Sbjct: 531 ERKNVHLKSTDIRGFHAKVPQQSNFSDCGIYALHFVELFLETPEQVIANTLDKSLRRTDA 590
Query: 416 KN 421
KN
Sbjct: 591 KN 592
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 32.7 bits (71), Expect = 0.049
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +2
Query: 302 SNLDDCNVEVLSLNEVFPSTSEESLSNDDSP---VRRKKNAKNKTVQNVQPDDAAKSTYV 472
S+L+D N + NE+ + SEE L N S V K KTV+N +KS +
Sbjct: 826 SHLNDTNSNIRKANEIMNNRSEEFLRNAASQAEIVGANKERIQKTVENGSQLLDSKSKAI 885
Query: 473 PTNSKS 490
+NS+S
Sbjct: 886 HSNSRS 891
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.9 bits (69), Expect = 0.085
Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 1/98 (1%)
Frame = +2
Query: 356 STSEESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYVPTNSKSSTGSRPKETPERQAS 535
S +S +ND SP K+ + + QP + + + P+ K P E + Q +
Sbjct: 467 SEEAKSTTNDSSP------PKDSSSTSTQPTEQSNAQQAPS-PKEEERPLPSEPSQNQPA 519
Query: 536 VYSDY-DLPKNTLHVIGSNPGEPKMSYTDPPKKLSKTM 646
Y D D P+N + + G + + T+P K +
Sbjct: 520 EYRDTPDTPRNIMPLPGLMSADQPIKVTEPSNDADKAI 557
>SPBC14F5.02 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 515
Score = 29.1 bits (62), Expect = 0.60
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 6/102 (5%)
Frame = +2
Query: 128 QGNEVKGEMEGLESCIYAVTVSKKPSTTNDGAGFCSGQRSFISIHSTDQ----PCLADVD 295
+G ++G + LES + +VT + N + CSG SFI + Q CLA +D
Sbjct: 65 EGFRIEGTL--LESLVESVTSASNYPKVNAFSLMCSGIPSFIWVEDDKQYALWACLAQLD 122
Query: 296 TASNLDDCNVEVLSLNEVFPS--TSEESLSNDDSPVRRKKNA 415
+ S + +E+ + P S E N ++ R++N+
Sbjct: 123 SYS-YPNHKLEIHVYKHILPDLPQSSEVDRNSETEGTREENS 163
>SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 751
Score = 28.7 bits (61), Expect = 0.79
Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 407 KNAKNK-TVQNVQPDDAAKSTYVPTNSKSSTGSR-PKETPER 526
KN+K K T + D A S PT S +S + PKETPER
Sbjct: 451 KNSKAKYTAKQPSYDRAGSSLASPTKSSASPLVKAPKETPER 492
>SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1067
Score = 28.3 bits (60), Expect = 1.0
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2
Query: 341 NEVFPSTSEESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKS 463
NE PST ++ ++D + K++ NKT + A+KS
Sbjct: 83 NESLPSTDKKKKKDNDDFKQNLKSSSNKTEEKYSATQASKS 123
>SPBC1861.01c |cnp3|SPBC56F2.13|CENP-C|Schizosaccharomyces pombe|chr
2|||Manual
Length = 643
Score = 27.5 bits (58), Expect = 1.8
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +2
Query: 239 QRSFISIHSTDQPCLADVDT--ASNLDDCNVEVLSLNEVFPSTSEESLSNDDSPVRRKKN 412
+RS + I S + DV+ A D+ N EVLS NE P SEE + P +
Sbjct: 474 KRSGVEIKSNLEAKSNDVEEYDAFYKDEINCEVLSWNEQNPKASEERVVGYSLPSVNLQQ 533
Query: 413 AKNKTVQ 433
N+ ++
Sbjct: 534 ISNQQLK 540
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 27.5 bits (58), Expect = 1.8
Identities = 15/63 (23%), Positives = 31/63 (49%)
Frame = +2
Query: 308 LDDCNVEVLSLNEVFPSTSEESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYVPTNSK 487
LD+ + + +E+ + ++S++ + ++KK KNK +N DD ++ P K
Sbjct: 28 LDNTSQDSPQNDELAEKSENLAVSSEKTTSKKKKGKKNKGNKNQVSDDESQELESPQGPK 87
Query: 488 SST 496
T
Sbjct: 88 ELT 90
>SPBC530.04 |mod5||Tea1 anchoring protein Mod5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 27.5 bits (58), Expect = 1.8
Identities = 24/116 (20%), Positives = 44/116 (37%), Gaps = 1/116 (0%)
Frame = +2
Query: 257 IHSTDQPCLADVDTASNLDDCNVEVLSLNEVFPSTSEESLSNDDSPVRRKKNAKNKTVQN 436
I +D P + DVDT S + ++++ S + + P N +++ +
Sbjct: 345 ISRSDSPIVYDVDTHSEDNASTASSEAISQSMRSFQPQPNTGSPFPRFTSTNTEDEQESD 404
Query: 437 VQPDDAAKSTYVPTNSKSSTGSRPKETPERQASVYS-DYDLPKNTLHVIGSNPGEP 601
+ DA ST V N + P + YS LP ++ +G +P
Sbjct: 405 IPQSDANDST-VNLNQPNYANLTPTPQVSPKRPTYSRSSPLPSASVPALGDGSPDP 459
>SPAC19A8.04 |erg5||C-22 sterol desaturase Erg5 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 541
Score = 27.1 bits (57), Expect = 2.4
Identities = 18/68 (26%), Positives = 29/68 (42%)
Frame = -1
Query: 404 SFERENRRWTNSPLMSMETLHSD*ALPHCSRPDLKLYQHPLNTAGLLSEC**TIFDQNKN 225
+FE+ N +W PL + H + S DL + LN+ + C + D K
Sbjct: 72 TFEKYNAKWQTGPLSCVSVFHKFVVI--ASERDLA--RKILNSPSYVQPC---VVDAGKK 124
Query: 224 QLHHSLWM 201
L H+ W+
Sbjct: 125 ILKHTNWV 132
>SPBC25B2.07c |mug164||microtubule-associated
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 501
Score = 27.1 bits (57), Expect = 2.4
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +2
Query: 353 PSTSEESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYVPTNSKSSTGS 502
PSTS LSN+ + ++ + ++ + + S +V T +K ST S
Sbjct: 111 PSTSLARLSNNAPRIPKEASLHENSISSKESPSVTTSKHVATITKPSTSS 160
>SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1402
Score = 26.6 bits (56), Expect = 3.2
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +2
Query: 416 KNKTVQNVQ--PDDAAKSTYVPTNSKSSTGSRPKETPER 526
+ + ++N + PD A+ + VP N+ SS+ + PK+ P R
Sbjct: 1307 EEEEIENAEQSPDWASSTLQVPFNASSSSLATPKKEPLR 1345
>SPBP4H10.11c |||long-chain-fatty-acid-CoA ligase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 26.6 bits (56), Expect = 3.2
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +2
Query: 422 KTVQNVQPDDAAKSTYVPTNSKSSTGSRPKET 517
K V V PD+ TY+ NS SS P +T
Sbjct: 581 KPVVIVNPDENGLRTYLTKNSGSSFNGNPNDT 612
>SPAC15A10.13 |ppk3||serine/threonine protein kinase
Ppk3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 637
Score = 26.2 bits (55), Expect = 4.2
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +2
Query: 374 LSNDDSPVRRKKNAKNKTVQNVQ 442
L ND + ++ KKN+K++ V N +
Sbjct: 574 LKNDTTEIKEKKNSKSRVVGNTE 596
>SPAC1805.10 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 527
Score = 26.2 bits (55), Expect = 4.2
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 473 PTNSKSSTGSRPKETP 520
PT+SKS+T S PK +P
Sbjct: 76 PTDSKSTTSSAPKNSP 91
>SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1016
Score = 26.2 bits (55), Expect = 4.2
Identities = 13/52 (25%), Positives = 25/52 (48%)
Frame = +2
Query: 167 SCIYAVTVSKKPSTTNDGAGFCSGQRSFISIHSTDQPCLADVDTASNLDDCN 322
SC ++ + P+TT+ +G C+G S++ D L + + +CN
Sbjct: 772 SCTLPISYTSTPTTTSI-SGTCNGATFDASLYVCDGTVLCPIVNGVSYQNCN 822
>SPAC25A8.03c ||SPAC3C7.15c|DUF185 protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 467
Score = 26.2 bits (55), Expect = 4.2
Identities = 12/47 (25%), Positives = 26/47 (55%)
Frame = -1
Query: 401 FERENRRWTNSPLMSMETLHSD*ALPHCSRPDLKLYQHPLNTAGLLS 261
FER ++++ + L+ M+ H D +LP + P + ++ +T + S
Sbjct: 336 FERLSKQFPHHSLLLMDVCHVDKSLPGINAPSVLSMENDFSTKKMSS 382
>SPCC1235.05c |fft2||fun thirty related protein
Fft2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1284
Score = 26.2 bits (55), Expect = 4.2
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Frame = +3
Query: 357 RHQRRVCPTT-ILPFEGKRTPRTKLCKMYSQMTPRNRL---TYQQTANPRQDPDQKKHQN 524
R R CP+ + P+ G + R + + + + + TYQ N ++D KHQN
Sbjct: 615 RELARFCPSLRVEPYYGSQQERANIREAIEENEIKYDILVTTYQLATNNKEDRSFLKHQN 674
Query: 525 DKPRSTQIMIYRKIHY 572
+ +Y + HY
Sbjct: 675 -----FDVCVYDEGHY 685
>SPAC12B10.14c |ppk2||serine/threonine protein kinase Ppk2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 665
Score = 26.2 bits (55), Expect = 4.2
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +2
Query: 188 VSKKPSTTNDGAGF---CSGQRSFISIHSTDQPCLADVDTAS 304
+S +P+TTN + +G R IS + D P L +VDT S
Sbjct: 228 ISIRPNTTNYRSSIQENSNGNRDSISPSAYDAPLLHNVDTQS 269
>SPAC3H8.02 |||sec14 cytosolic factor family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 444
Score = 25.8 bits (54), Expect = 5.6
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 372 LSSDVDGNTSFRLSTSTLQSSRFEAVSTSAKHG 274
LS D ++S RLS+ + SR TS+ HG
Sbjct: 48 LSDDSSSSSSHRLSSVSYAKSRTRLELTSSSHG 80
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 25.8 bits (54), Expect = 5.6
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = -3
Query: 396 TGESSLDKLSSDVDGNTSFRLSTSTLQSSRFEAVSTSAKHGWSVE 262
+ S D SS DGN++ +TS S++ STS++ SV+
Sbjct: 303 SSSSDSDSSSSSEDGNSNTDTTTSGEVSAQSSTNSTSSEESTSVK 347
>SPBC29B5.01 |atf1|mts1, sss1, gad7|transcription factor
Atf1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 566
Score = 25.4 bits (53), Expect = 7.4
Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 4/84 (4%)
Frame = +2
Query: 371 SLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYVPTNSKSSTGS-RPKETPERQASVYSD 547
S ND + N +T Q PD S TN ++ TG+ P+ + +Q +Y
Sbjct: 296 SSENDQAASTTANNLLKQTQQQTFPDSIRPSFTQNTNPQAVTGTMNPQASRTQQQPMYFM 355
Query: 548 YDLPKNTL-HVIGS--NPGEPKMS 610
N + V G NP +P ++
Sbjct: 356 GSQQFNGMPSVYGDTVNPADPSLT 379
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 25.4 bits (53), Expect = 7.4
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +2
Query: 470 VPTNSKSSTGSRPKETPERQASVYS-DYDLPKNTLHVIGSNPGEPKMSYTDPP 625
V T ++++ G+ P S +S + T +I NPG P S + PP
Sbjct: 848 VTTGTETTEGTATYTEPTTFTSTFSFTTTIIGGTTTIIPVNPGNPSSSVSAPP 900
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 25.4 bits (53), Expect = 7.4
Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +3
Query: 465 LTYQQTANPRQDPDQKKHQN-DKPRSTQ 545
L QQ + P+Q P Q++HQ +P+ Q
Sbjct: 166 LQQQQQSQPQQQPQQQQHQQPQQPQPPQ 193
>SPBPB7E8.02 |||PSP1 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 749
Score = 25.4 bits (53), Expect = 7.4
Identities = 29/88 (32%), Positives = 36/88 (40%), Gaps = 1/88 (1%)
Frame = +2
Query: 398 RRKKNAKNKTVQ-NVQPDDAAKSTYVPTNSKSSTGSRPKETPERQASVYSDYDLPKNTLH 574
RR A N T+ NV A S+ V T + S SR + S S + PKN LH
Sbjct: 474 RRSSTADNGTLSSNVPLYPAYNSSPVQTRT-SLFSSRLSKPSNPIVSSVSQANAPKNALH 532
Query: 575 VIGSNPGEPKMSYTDPPKKLSKTMKKFL 658
+ S S + P LS T K L
Sbjct: 533 SMPS-----PTSLANLPSNLSDTQYKKL 555
>SPBC1703.14c |top1||DNA topoisomerase I|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 814
Score = 25.4 bits (53), Expect = 7.4
Identities = 11/41 (26%), Positives = 19/41 (46%)
Frame = +2
Query: 338 LNEVFPSTSEESLSNDDSPVRRKKNAKNKTVQNVQPDDAAK 460
L+E S+ DD P+R+++ + K + N AK
Sbjct: 42 LSESLNKKSKSESDEDDIPIRKRRASSKKNMSNSSSKKRAK 82
>SPBC36B7.09 |gcn2|ppk28, ppk28, SPBP18G5.01|eIF2 alpha kinase Gcn2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1576
Score = 25.4 bits (53), Expect = 7.4
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
Frame = +2
Query: 395 VRRKKNA---KNKTVQNVQPDDAAKSTYVPTNSKSSTGSRPKETPERQ---ASVYSDYDL 556
++R+K+A + +T+QN D+ + +Y S S + KET + S+Y D +
Sbjct: 161 LKREKDALFEEEQTLQNKIQDELQRRSYETPQSSSKKKTNSKETTSLETLPTSIYFDCSI 220
Query: 557 PKNTLH 574
H
Sbjct: 221 SVRDCH 226
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 25.0 bits (52), Expect = 9.7
Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 6/77 (7%)
Frame = +2
Query: 353 PSTSEESLSND-DSPVRRKKNAKNKTV-----QNVQPDDAAKSTYVPTNSKSSTGSRPKE 514
P TSE + N D V K ++ V + +PD K + ST S+ K+
Sbjct: 88 PETSENVVKNSVDESVAEKPEKEDLAVIESEDKAAKPDGEIKKNVETEVTSRSTSSQEKD 147
Query: 515 TPERQASVYSDYDLPKN 565
E+Q D + K+
Sbjct: 148 ELEKQVKTLHDLNEQKD 164
>SPCC1919.12c |||aminopeptidase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 843
Score = 25.0 bits (52), Expect = 9.7
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +2
Query: 425 TVQNVQPDDAAKSTYVPTNSKSSTGSRPKETPERQASV 538
T Q +DA + + T+S GS TP R+ S+
Sbjct: 516 TTQTTHEEDALIGSSINTSSHQHYGSTLNSTPHRRNSI 553
>SPAC1A6.04c |plb1||phospholipase B homolog Plb1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 613
Score = 25.0 bits (52), Expect = 9.7
Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +2
Query: 182 VTVSKKPSTTN-DGAGFCSGQRSFISIHSTDQPCLADVD 295
V ++ TN G + Q+SF+S+H D+P D
Sbjct: 453 VVAAQAAGNTNVKGFPYVPSQQSFVSLHFNDRPVFFGCD 491
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 25.0 bits (52), Expect = 9.7
Identities = 23/96 (23%), Positives = 35/96 (36%), Gaps = 1/96 (1%)
Frame = +2
Query: 275 PCLADVDTASNLDDCNVEVLSLNEVFPSTSEESLSNDDSPVRRKKNAKNKTVQNVQPDDA 454
P V + N + +S+N STS+ L S V A NK P +
Sbjct: 259 PSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPPPS 318
Query: 455 AKST-YVPTNSKSSTGSRPKETPERQASVYSDYDLP 559
++ P + SS S P P +++ LP
Sbjct: 319 RRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLP 354
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,921,403
Number of Sequences: 5004
Number of extensions: 63035
Number of successful extensions: 253
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 252
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 301829700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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