Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25g04
         (754 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   3.1  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    22   5.4  
EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate c...    21   9.4  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   9.4  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   9.4  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    21   9.4  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   9.4  
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    21   9.4  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 366  LRVAPEEHPVLLTEAPLNPKANREKM 443
            LR+ P  H V+ T   +NP  + EK+
Sbjct: 1461 LRLGPCWHAVMTTYPRINPDNHNEKL 1486


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 12/34 (35%), Positives = 12/34 (35%), Gaps = 1/34 (2%)
 Frame = +2

Query: 596 TP-PRHPASGLSRSRPHRLPHEDPHRARLLVHYH 694
           TP P H   G   S  H  PH     A    H H
Sbjct: 411 TPGPHHHTMGHGHSHIHATPHHHHSHAATPHHQH 444


>EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate
           carboxykinase protein.
          Length = 118

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -3

Query: 569 VGDTVAGVQHDTGGTTGRVQREHGLDGDVHG 477
           VGD +A ++ D  G    +  E+G  G   G
Sbjct: 42  VGDDIAWMKFDKEGRLRAINPEYGFFGVAPG 72


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +2

Query: 179 PLDRGKAPPSGRDGRYGTEGLVRRRRG 259
           PL+RG+   SG+   Y     +R R G
Sbjct: 35  PLERGELTNSGKMREYQLGQFLRERYG 61


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +2

Query: 179 PLDRGKAPPSGRDGRYGTEGLVRRRRG 259
           PL+RG+   SG+   Y     +R R G
Sbjct: 50  PLERGELTNSGKMREYQLGQFLRERYG 76


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +2

Query: 221 RYGTEGLVRRRRGTEQKRYPDPQIPHRTRNRH 316
           +YG     R R  TE++R  +P+I     N +
Sbjct: 291 KYGETSKERSRDRTERERSKEPKIISSLSNNY 322


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = +2

Query: 509 AVRVRSYHRYRAGLRRRCLPHRAHLRGIRTPPRHPASGLSRSRP 640
           ++  +++HR        C P   +L  I + P HP +  S S P
Sbjct: 62  SLTAQAHHRLYPAFSSSCDPVPGNLEQIGSRPLHPPAS-STSLP 104


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +3

Query: 129 GMCKAGFAGD 158
           GMCK G +GD
Sbjct: 130 GMCKEGISGD 139


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 227,712
Number of Sequences: 438
Number of extensions: 5828
Number of successful extensions: 23
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23632110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)