Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25g02
         (311 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF098987-4|AAC67429.1|  496|Caenorhabditis elegans Hypothetical ...    35   0.010
U29244-8|AAC71084.1|  751|Caenorhabditis elegans Eps15 (endocyto...    30   0.30 
AY027560-1|AAK13051.1|  796|Caenorhabditis elegans EHS-1 protein.      30   0.30 
Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical p...    28   1.6  
Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical pr...    28   1.6  
X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein.     28   1.6  
AC084197-38|AAU87807.1|  186|Caenorhabditis elegans Hypothetical...    28   1.6  
AF125970-1|AAD14763.1|  357|Caenorhabditis elegans Hypothetical ...    27   2.8  
Z77666-8|CAJ43910.1|  493|Caenorhabditis elegans Hypothetical pr...    26   6.4  
Z80223-4|CAB02318.1|  229|Caenorhabditis elegans Hypothetical pr...    25   8.4  
AF016451-9|AAB66005.2|  524|Caenorhabditis elegans Udp-glucurono...    25   8.4  
AC006780-3|AAF60649.2|  425|Caenorhabditis elegans Hypothetical ...    25   8.4  

>AF098987-4|AAC67429.1|  496|Caenorhabditis elegans Hypothetical
           protein F40H3.1a protein.
          Length = 496

 Score = 35.1 bits (77), Expect = 0.010
 Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
 Frame = +1

Query: 85  QCRAEVAETSHARMAPPVKTTATAMPTAP--IVHQRQETAANGHL-KETFENDPFCF 246
           +C+A + +T++    PPV  T +A    P  IV +++ T+A   +  E  +N+P CF
Sbjct: 190 RCKAILPDTTYICTLPPVSATFSAPVVTPKKIVKRKKSTSAAAKMAAEVLQNEPHCF 246


>U29244-8|AAC71084.1|  751|Caenorhabditis elegans Eps15 (endocytosis
           protein) homologoussequence protein 1, isoform a
           protein.
          Length = 751

 Score = 30.3 bits (65), Expect = 0.30
 Identities = 24/76 (31%), Positives = 32/76 (42%), Gaps = 3/76 (3%)
 Frame = +1

Query: 22  LTAQDFCYSTFNQISLISNH*QCRAEVAETS---HARMAPPVKTTATAMPTAPIVHQRQE 192
           L +Q    ST    SL+S+      E A TS   H +  P    +A A P A    Q  +
Sbjct: 614 LRSQQRLLSTVIDQSLLSDD-TVYGETAGTSSQNHVQQPPDPFASARANPAADPFAQVDQ 672

Query: 193 TAANGHLKETFENDPF 240
             ++GH    F  DPF
Sbjct: 673 FGSSGHFDAAFPTDPF 688


>AY027560-1|AAK13051.1|  796|Caenorhabditis elegans EHS-1 protein.
          Length = 796

 Score = 30.3 bits (65), Expect = 0.30
 Identities = 24/76 (31%), Positives = 32/76 (42%), Gaps = 3/76 (3%)
 Frame = +1

Query: 22  LTAQDFCYSTFNQISLISNH*QCRAEVAETS---HARMAPPVKTTATAMPTAPIVHQRQE 192
           L +Q    ST    SL+S+      E A TS   H +  P    +A A P A    Q  +
Sbjct: 659 LRSQQRLLSTVIDQSLLSDD-TVYGETAGTSSQNHVQQPPDPFASARANPAADPFAQVDQ 717

Query: 193 TAANGHLKETFENDPF 240
             ++GH    F  DPF
Sbjct: 718 FGSSGHFDAAFPTDPF 733


>Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical
            protein R06C7.10 protein.
          Length = 1938

 Score = 27.9 bits (59), Expect = 1.6
 Identities = 17/36 (47%), Positives = 20/36 (55%)
 Frame = +1

Query: 46   STFNQISLISNH*QCRAEVAETSHARMAPPVKTTAT 153
            S F QI L   + + RAEVAE S  RM   V  +AT
Sbjct: 1901 SKFRQIQLALENAEERAEVAENSLVRMRGQVVRSAT 1936


>Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical protein
            R06C7.10 protein.
          Length = 1938

 Score = 27.9 bits (59), Expect = 1.6
 Identities = 17/36 (47%), Positives = 20/36 (55%)
 Frame = +1

Query: 46   STFNQISLISNH*QCRAEVAETSHARMAPPVKTTAT 153
            S F QI L   + + RAEVAE S  RM   V  +AT
Sbjct: 1901 SKFRQIQLALENAEERAEVAENSLVRMRGQVVRSAT 1936


>X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein.
          Length = 1938

 Score = 27.9 bits (59), Expect = 1.6
 Identities = 17/36 (47%), Positives = 20/36 (55%)
 Frame = +1

Query: 46   STFNQISLISNH*QCRAEVAETSHARMAPPVKTTAT 153
            S F QI L   + + RAEVAE S  RM   V  +AT
Sbjct: 1901 SKFRQIQLALENAEERAEVAENSLVRMRGQVVRSAT 1936


>AC084197-38|AAU87807.1|  186|Caenorhabditis elegans Hypothetical
           protein Y73B6BL.43 protein.
          Length = 186

 Score = 27.9 bits (59), Expect = 1.6
 Identities = 14/50 (28%), Positives = 24/50 (48%)
 Frame = +1

Query: 85  QCRAEVAETSHARMAPPVKTTATAMPTAPIVHQRQETAANGHLKETFEND 234
           +CR  VA+  H+RM   ++  A ++    I+    E     HLK  F+ +
Sbjct: 52  KCREIVADVQHSRMPRHMEQEACSLAAKSIMTYHLEHDIARHLKMAFDRE 101


>AF125970-1|AAD14763.1|  357|Caenorhabditis elegans Hypothetical
           protein Y60C6A.1 protein.
          Length = 357

 Score = 27.1 bits (57), Expect = 2.8
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +1

Query: 160 PTAPIVHQRQETAANGHLKETFENDPFC 243
           P+ PI   R E   +GH +ETFEN   C
Sbjct: 41  PSVPIRVGRIEFYWDGHFQETFENPVQC 68


>Z77666-8|CAJ43910.1|  493|Caenorhabditis elegans Hypothetical
           protein K08E7.5b protein.
          Length = 493

 Score = 25.8 bits (54), Expect = 6.4
 Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = +1

Query: 94  AEVAETSHARMAPPVKTTATAMPTA-PIVHQRQETAANGHLKETFEN 231
           A  AE+   +      TT T  PT  P+  ++ + + +   KE+FEN
Sbjct: 61  ASGAESGPKKTTSKPATTPTPEPTTTPVEEEKVKVSPSSSTKESFEN 107


>Z80223-4|CAB02318.1|  229|Caenorhabditis elegans Hypothetical
           protein F26D10.11 protein.
          Length = 229

 Score = 25.4 bits (53), Expect = 8.4
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +2

Query: 239 FVFKDSGCILYDYG 280
           FVF  +GC+LY YG
Sbjct: 121 FVFMLAGCVLYPYG 134


>AF016451-9|AAB66005.2|  524|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein51 protein.
          Length = 524

 Score = 25.4 bits (53), Expect = 8.4
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +1

Query: 208 HLKETFENDPFCF*GLWMYTL 270
           HL   FEN+PF   G   YTL
Sbjct: 91  HLTSPFENNPFPIDGFRQYTL 111


>AC006780-3|AAF60649.2|  425|Caenorhabditis elegans Hypothetical
           protein Y47D9A.5 protein.
          Length = 425

 Score = 25.4 bits (53), Expect = 8.4
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -2

Query: 301 IDHNCLLSIIIKYTSRVLKNKTGRFQMFPLDVH*QQ 194
           I+H+C+L    +Y   + K K G+F  +  D+  QQ
Sbjct: 132 INHDCILDGFERYRLNIAKRKPGQFS-WSFDMKSQQ 166


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,531,450
Number of Sequences: 27780
Number of extensions: 101098
Number of successful extensions: 257
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 247
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 256
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 344570176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)