BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte25g01
(684 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069828-1|AAL39973.1| 512|Drosophila melanogaster SD07683p pro... 63 3e-10
U11691-1|AAA19905.1| 796|Drosophila melanogaster E239.9-1 protein. 39 0.007
AY180917-1|AAN87269.1| 2360|Drosophila melanogaster ORF protein. 39 0.007
AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical... 36 0.052
AY069313-1|AAL39458.1| 440|Drosophila melanogaster LD02709p pro... 29 5.9
AE013599-893|AAF58917.1| 440|Drosophila melanogaster CG1825-PA ... 29 5.9
U38248-1|AAB00184.1| 440|Drosophila melanogaster CP60 protein. 29 7.8
>AY069828-1|AAL39973.1| 512|Drosophila melanogaster SD07683p
protein.
Length = 512
Score = 63.3 bits (147), Expect = 3e-10
Identities = 47/151 (31%), Positives = 67/151 (44%), Gaps = 2/151 (1%)
Frame = +3
Query: 237 DELLNVLEDTAALLNKTQINLKKCPKARLTRGYVEARIKCIEEYWTTFKQTHLQLVKITP 416
D+L+ V D L + N+KK AR T Y E R+ I+E+ F Q H L+ +
Sbjct: 5 DQLVRVQTDRIESLKRLFSNVKKDSSARKTEIYFEKRLNQIDEFNKEFHQAHHTLICMAD 64
Query: 417 KEQRQELPYFQNEDYFVFEXXXXXXXXXXXXXXQSFTQAAAPSTLTSSPN-NSKIIADTE 593
E E Y Q FE + P T+T + + NS I E
Sbjct: 65 YE---ESVYKQQNTISQFEDLGMEVYCFVAEEKKRIY----PGTVTHNESANSTITTHVE 117
Query: 594 NL-VRLPRIELPKFTGNYEDWPTFQDLFTSL 683
+ + LP++ +PKF+GN DWP+F D F L
Sbjct: 118 EVRIPLPKLPVPKFSGNCADWPSFHDAFLRL 148
>U11691-1|AAA19905.1| 796|Drosophila melanogaster E239.9-1 protein.
Length = 796
Score = 38.7 bits (86), Expect = 0.007
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = +3
Query: 534 AAPSTLTSSPNNSKI--IADTENLVRLPRIELPKFTGNYEDWPTFQDLFTSL 683
A S L+ + N +++ + E L LP+I++P F G+ ++W F +LFT L
Sbjct: 126 AINSRLSGTINKAEMSTVVKAEELPTLPKIQIPTFFGDSKEWDLFNELFTEL 177
>AY180917-1|AAN87269.1| 2360|Drosophila melanogaster ORF protein.
Length = 2360
Score = 38.7 bits (86), Expect = 0.007
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = +3
Query: 534 AAPSTLTSSPNNSKI--IADTENLVRLPRIELPKFTGNYEDWPTFQDLFTSL 683
A S L+ + N +++ + E L LP+I++P F G+ ++W F +LFT L
Sbjct: 205 AINSRLSGTINKAEMSTVVKAEELPTLPKIQIPTFFGDSKEWDLFNELFTEL 256
>AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical
protein protein.
Length = 1830
Score = 35.9 bits (79), Expect = 0.052
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +3
Query: 603 RLPRIELPKFTGNYEDWPTFQDLFTSL 683
RLP + F G+Y WPTF+DLFT++
Sbjct: 226 RLPPCDTEVFDGDYLRWPTFRDLFTAI 252
>AY069313-1|AAL39458.1| 440|Drosophila melanogaster LD02709p
protein.
Length = 440
Score = 29.1 bits (62), Expect = 5.9
Identities = 28/124 (22%), Positives = 47/124 (37%), Gaps = 6/124 (4%)
Frame = +3
Query: 276 LNKTQINLKKCPKARLTRGYVEARIKCIEEYWTTFKQTHL--QLVKITPKEQRQELPYFQ 449
LNK ++ + L + Y + ++K W F H Q KI+ KE+ ++P +
Sbjct: 40 LNKLSVHESRSIFIVLQKKYEQEKLKG-NSAWKLFSLMHQIHQEPKISIKEENDQVPMEE 98
Query: 450 NEDYFVFEXXXXXXXXXXXXXXQSFTQAAAPSTLTSSPNNSKIIADTENLVRL----PRI 617
E+Y + E Q + S+ SP S E RL P +
Sbjct: 99 VEEYEMLEVQEPEDEDDAHQYGQHTNSTGSASSDGESPTKSHSTGSPEKDERLAYAKPNV 158
Query: 618 ELPK 629
+ P+
Sbjct: 159 DTPR 162
>AE013599-893|AAF58917.1| 440|Drosophila melanogaster CG1825-PA
protein.
Length = 440
Score = 29.1 bits (62), Expect = 5.9
Identities = 28/124 (22%), Positives = 47/124 (37%), Gaps = 6/124 (4%)
Frame = +3
Query: 276 LNKTQINLKKCPKARLTRGYVEARIKCIEEYWTTFKQTHL--QLVKITPKEQRQELPYFQ 449
LNK ++ + L + Y + ++K W F H Q KI+ KE+ ++P +
Sbjct: 40 LNKLSVHESRSIFIVLQKKYEQEKLKG-NSAWKLFSLMHQIHQEPKISIKEENDQVPMEE 98
Query: 450 NEDYFVFEXXXXXXXXXXXXXXQSFTQAAAPSTLTSSPNNSKIIADTENLVRL----PRI 617
E+Y + E Q + S+ SP S E RL P +
Sbjct: 99 VEEYEMLEVQEPEDEDDAHQYGQHTNSTGSASSDGESPTKSHSTGSPEKDERLAYAKPNV 158
Query: 618 ELPK 629
+ P+
Sbjct: 159 DTPR 162
>U38248-1|AAB00184.1| 440|Drosophila melanogaster CP60 protein.
Length = 440
Score = 28.7 bits (61), Expect = 7.8
Identities = 28/124 (22%), Positives = 47/124 (37%), Gaps = 6/124 (4%)
Frame = +3
Query: 276 LNKTQINLKKCPKARLTRGYVEARIKCIEEYWTTFKQTHL--QLVKITPKEQRQELPYFQ 449
LNK ++ + L + Y + ++K W F H Q KI+ KE+ ++P +
Sbjct: 40 LNKLSVHESRSIFIVLQKKYEQEKLKG-NSAWKLFSLMHQIHQDPKISIKEENDQVPMEE 98
Query: 450 NEDYFVFEXXXXXXXXXXXXXXQSFTQAAAPSTLTSSPNNSKIIADTENLVRL----PRI 617
E+Y + E Q + S+ SP S E RL P +
Sbjct: 99 VEEYEMLEVQEPEDEDDAHQYGQHTNSTGSASSDGESPTKSHSTGSPEKDERLAYAKPNV 158
Query: 618 ELPK 629
+ P+
Sbjct: 159 DTPR 162
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,223,110
Number of Sequences: 53049
Number of extensions: 532027
Number of successful extensions: 1404
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1365
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1403
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2992560750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -