Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25g01
         (684 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    24   1.6  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   6.3  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   6.3  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 510 DLLNRLTKRDTNLRTRSNLHFENM 439
           D+L  L K+  +LRT + LH E +
Sbjct: 383 DILRELLKKIPDLRTLNTLHSEKL 406


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = -1

Query: 150 WFTAYWKTIF 121
           WF+ YW+ +F
Sbjct: 280 WFSEYWEEVF 289


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = -1

Query: 150 WFTAYWKTIF 121
           WF+ YW+ +F
Sbjct: 370 WFSEYWEEVF 379


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,395
Number of Sequences: 438
Number of extensions: 3397
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20830365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)