Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte25f19
(706 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT004479-1|AAO42643.1| 1354|Drosophila melanogaster LD41624p pro... 33 0.38
AY113369-1|AAM29374.1| 910|Drosophila melanogaster LD32717p pro... 33 0.38
AE014134-2028|AAF53066.2| 1354|Drosophila melanogaster CG6181-PB... 33 0.38
AE014134-2027|AAF53067.2| 1354|Drosophila melanogaster CG6181-PA... 33 0.38
AY071437-1|AAL49059.1| 633|Drosophila melanogaster RE52151p pro... 30 3.5
AE014298-1169|AAF46367.1| 633|Drosophila melanogaster CG11190-P... 30 3.5
U80064-1|AAC24158.1| 972|Drosophila melanogaster DNA topoisomer... 29 4.7
M74557-1|AAA28951.1| 972|Drosophila melanogaster topoisomerase ... 29 4.7
BT023755-1|AAZ41763.1| 974|Drosophila melanogaster RE58921p pro... 29 4.7
AE014298-2126|AAN09660.1| 581|Drosophila melanogaster CG6146-PB... 29 4.7
AE014298-2125|AAX52496.1| 974|Drosophila melanogaster CG6146-PC... 29 4.7
AE014298-2124|AAF48440.1| 974|Drosophila melanogaster CG6146-PA... 29 4.7
BT024411-1|ABC86473.1| 787|Drosophila melanogaster IP03655p pro... 29 6.2
AE014134-300|AAN10463.2| 383|Drosophila melanogaster CG31929-PA... 29 6.2
AE013599-3751|AAM68283.3| 812|Drosophila melanogaster CG2987-PB... 29 6.2
AE013599-3750|AAF47116.2| 787|Drosophila melanogaster CG2987-PA... 29 6.2
>BT004479-1|AAO42643.1| 1354|Drosophila melanogaster LD41624p protein.
Length = 1354
Score = 33.1 bits (72), Expect = 0.38
Identities = 15/65 (23%), Positives = 29/65 (44%)
Frame = +3
Query: 339 QLSNRFCTARMFNVNYVSSVSRSEKLLVDVDLRRGCTEFVKNQRSNASMSGALGDPKSTT 518
+L R+ + +N ++R V +L R C +F+KN N+ S K+
Sbjct: 1288 ELKQRYLNEALLAINMADPITREHAPKVLTELYRNCQQFIKNSPKNSQFSNVRLLMKAII 1347
Query: 519 SYEER 533
+Y ++
Sbjct: 1348 TYRDQ 1352
>AY113369-1|AAM29374.1| 910|Drosophila melanogaster LD32717p protein.
Length = 910
Score = 33.1 bits (72), Expect = 0.38
Identities = 15/65 (23%), Positives = 29/65 (44%)
Frame = +3
Query: 339 QLSNRFCTARMFNVNYVSSVSRSEKLLVDVDLRRGCTEFVKNQRSNASMSGALGDPKSTT 518
+L R+ + +N ++R V +L R C +F+KN N+ S K+
Sbjct: 844 ELKQRYLNEALLAINMADPITREHAPKVLTELYRNCQQFIKNSPKNSQFSNVRLLMKAII 903
Query: 519 SYEER 533
+Y ++
Sbjct: 904 TYRDQ 908
>AE014134-2028|AAF53066.2| 1354|Drosophila melanogaster CG6181-PB,
isoform B protein.
Length = 1354
Score = 33.1 bits (72), Expect = 0.38
Identities = 15/65 (23%), Positives = 29/65 (44%)
Frame = +3
Query: 339 QLSNRFCTARMFNVNYVSSVSRSEKLLVDVDLRRGCTEFVKNQRSNASMSGALGDPKSTT 518
+L R+ + +N ++R V +L R C +F+KN N+ S K+
Sbjct: 1288 ELKQRYLNEALLAINMADPITREHAPKVLTELYRNCQQFIKNSPKNSQFSNVRLLMKAII 1347
Query: 519 SYEER 533
+Y ++
Sbjct: 1348 TYRDQ 1352
>AE014134-2027|AAF53067.2| 1354|Drosophila melanogaster CG6181-PA,
isoform A protein.
Length = 1354
Score = 33.1 bits (72), Expect = 0.38
Identities = 15/65 (23%), Positives = 29/65 (44%)
Frame = +3
Query: 339 QLSNRFCTARMFNVNYVSSVSRSEKLLVDVDLRRGCTEFVKNQRSNASMSGALGDPKSTT 518
+L R+ + +N ++R V +L R C +F+KN N+ S K+
Sbjct: 1288 ELKQRYLNEALLAINMADPITREHAPKVLTELYRNCQQFIKNSPKNSQFSNVRLLMKAII 1347
Query: 519 SYEER 533
+Y ++
Sbjct: 1348 TYRDQ 1352
>AY071437-1|AAL49059.1| 633|Drosophila melanogaster RE52151p
protein.
Length = 633
Score = 29.9 bits (64), Expect = 3.5
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = +3
Query: 276 EDVVSVELKDRSSKSYEIRIFQLSNR-FCTARMF--NVNYVSSVSRSEKLLV 422
ED VEL ++ Y++R+F+LSN F R+F +N ++ S K+ V
Sbjct: 229 EDNCIVELTQTANLVYDLRLFELSNNDFSLRRLFGMGLNGYCELAESSKIYV 280
>AE014298-1169|AAF46367.1| 633|Drosophila melanogaster CG11190-PA
protein.
Length = 633
Score = 29.9 bits (64), Expect = 3.5
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = +3
Query: 276 EDVVSVELKDRSSKSYEIRIFQLSNR-FCTARMF--NVNYVSSVSRSEKLLV 422
ED VEL ++ Y++R+F+LSN F R+F +N ++ S K+ V
Sbjct: 229 EDNCIVELTQTANLVYDLRLFELSNNDFSLRRLFGMGLNGYCELAESSKIYV 280
>U80064-1|AAC24158.1| 972|Drosophila melanogaster DNA topoisomerase
I protein.
Length = 972
Score = 29.5 bits (63), Expect = 4.7
Identities = 16/65 (24%), Positives = 28/65 (43%)
Frame = +3
Query: 213 EIKSTSTGPYYRRTILNWTCFEDVVSVELKDRSSKSYEIRIFQLSNRFCTARMFNVNYVS 392
E K P Y R N + D +EL + + ++ L++ +CT +FN N+
Sbjct: 444 EHKGPVFAPRYERVPRNVRFYYDGKPLELSEETEEAATFYAKMLNHDYCTKEVFNNNFFK 503
Query: 393 SVSRS 407
+S
Sbjct: 504 DFRKS 508
>M74557-1|AAA28951.1| 972|Drosophila melanogaster topoisomerase I
protein.
Length = 972
Score = 29.5 bits (63), Expect = 4.7
Identities = 16/65 (24%), Positives = 28/65 (43%)
Frame = +3
Query: 213 EIKSTSTGPYYRRTILNWTCFEDVVSVELKDRSSKSYEIRIFQLSNRFCTARMFNVNYVS 392
E K P Y R N + D +EL + + ++ L++ +CT +FN N+
Sbjct: 444 EHKGPVFAPRYERVPRNVRFYYDGKPLELSEETEEAATFYAKMLNHDYCTKEVFNNNFFK 503
Query: 393 SVSRS 407
+S
Sbjct: 504 DFRKS 508
>BT023755-1|AAZ41763.1| 974|Drosophila melanogaster RE58921p
protein.
Length = 974
Score = 29.5 bits (63), Expect = 4.7
Identities = 16/65 (24%), Positives = 28/65 (43%)
Frame = +3
Query: 213 EIKSTSTGPYYRRTILNWTCFEDVVSVELKDRSSKSYEIRIFQLSNRFCTARMFNVNYVS 392
E K P Y R N + D +EL + + ++ L++ +CT +FN N+
Sbjct: 446 EHKGPVFAPRYERVPRNVRFYYDGKPLELSEETEEAATFYAKMLNHDYCTKEVFNNNFFK 505
Query: 393 SVSRS 407
+S
Sbjct: 506 DFRKS 510
>AE014298-2126|AAN09660.1| 581|Drosophila melanogaster CG6146-PB,
isoform B protein.
Length = 581
Score = 29.5 bits (63), Expect = 4.7
Identities = 16/65 (24%), Positives = 28/65 (43%)
Frame = +3
Query: 213 EIKSTSTGPYYRRTILNWTCFEDVVSVELKDRSSKSYEIRIFQLSNRFCTARMFNVNYVS 392
E K P Y R N + D +EL + + ++ L++ +CT +FN N+
Sbjct: 53 EHKGPVFAPRYERVPRNVRFYYDGKPLELSEETEEAATFYAKMLNHDYCTKEVFNNNFFK 112
Query: 393 SVSRS 407
+S
Sbjct: 113 DFRKS 117
>AE014298-2125|AAX52496.1| 974|Drosophila melanogaster CG6146-PC,
isoform C protein.
Length = 974
Score = 29.5 bits (63), Expect = 4.7
Identities = 16/65 (24%), Positives = 28/65 (43%)
Frame = +3
Query: 213 EIKSTSTGPYYRRTILNWTCFEDVVSVELKDRSSKSYEIRIFQLSNRFCTARMFNVNYVS 392
E K P Y R N + D +EL + + ++ L++ +CT +FN N+
Sbjct: 446 EHKGPVFAPRYERVPRNVRFYYDGKPLELSEETEEAATFYAKMLNHDYCTKEVFNNNFFK 505
Query: 393 SVSRS 407
+S
Sbjct: 506 DFRKS 510
>AE014298-2124|AAF48440.1| 974|Drosophila melanogaster CG6146-PA,
isoform A protein.
Length = 974
Score = 29.5 bits (63), Expect = 4.7
Identities = 16/65 (24%), Positives = 28/65 (43%)
Frame = +3
Query: 213 EIKSTSTGPYYRRTILNWTCFEDVVSVELKDRSSKSYEIRIFQLSNRFCTARMFNVNYVS 392
E K P Y R N + D +EL + + ++ L++ +CT +FN N+
Sbjct: 446 EHKGPVFAPRYERVPRNVRFYYDGKPLELSEETEEAATFYAKMLNHDYCTKEVFNNNFFK 505
Query: 393 SVSRS 407
+S
Sbjct: 506 DFRKS 510
>BT024411-1|ABC86473.1| 787|Drosophila melanogaster IP03655p
protein.
Length = 787
Score = 29.1 bits (62), Expect = 6.2
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 441 GCTEFVKNQRSNASMSGALGDPKSTTSYEERP 536
G T + ++RSN +M+G + D K TTS + P
Sbjct: 756 GITGGLTSERSNENMAGGMCDSKGTTSSSDIP 787
>AE014134-300|AAN10463.2| 383|Drosophila melanogaster CG31929-PA
protein.
Length = 383
Score = 29.1 bits (62), Expect = 6.2
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +3
Query: 45 LISYFILLKVVCAAGVCKSTEKPVARNSI 131
++++F+LLK+VC+ G + ARNS+
Sbjct: 53 ILNFFLLLKMVCSGGQKLGIPEAFARNSV 81
>AE013599-3751|AAM68283.3| 812|Drosophila melanogaster CG2987-PB,
isoform B protein.
Length = 812
Score = 29.1 bits (62), Expect = 6.2
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 441 GCTEFVKNQRSNASMSGALGDPKSTTSYEERP 536
G T + ++RSN +M+G + D K TTS + P
Sbjct: 781 GITGGLTSERSNENMAGGMCDSKGTTSSSDIP 812
>AE013599-3750|AAF47116.2| 787|Drosophila melanogaster CG2987-PA,
isoform A protein.
Length = 787
Score = 29.1 bits (62), Expect = 6.2
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 441 GCTEFVKNQRSNASMSGALGDPKSTTSYEERP 536
G T + ++RSN +M+G + D K TTS + P
Sbjct: 756 GITGGLTSERSNENMAGGMCDSKGTTSSSDIP 787
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,744,357
Number of Sequences: 53049
Number of extensions: 620561
Number of successful extensions: 2215
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2082
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2215
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3108380451
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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