Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25f19
         (706 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    24   1.6  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    22   6.5  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
 Frame = +3

Query: 54  YFILLKVVCAAGVCKSTEKPVARNSIRLGREHNGRPV--KVTVRVVN--IPKSAVEYEIK 221
           YFI+L  + A GVC    K  A +   L ++ +   +  K++  + N  +      Y+I+
Sbjct: 3   YFIILLALVALGVCAPNVKQRAADQDLLNKQQDVIQLLQKISQPIPNQELQNLGASYDIE 62

Query: 222 STS 230
           S S
Sbjct: 63  SNS 65


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = +2

Query: 77  LCRWCLQIYRKASCQEFNTIRTRTQRTTCK 166
           + RW L +Y   +CQ    I +R    + K
Sbjct: 1   MIRWLLLMYLGITCQGVTDIHSRNLTNSLK 30


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,944
Number of Sequences: 438
Number of extensions: 4176
Number of successful extensions: 5
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21683070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)