Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte25f08
(714 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein. 85 3e-18
AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein. 85 3e-18
AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein. 85 3e-18
AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein. 85 3e-18
U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles ... 28 0.25
CR954257-9|CAJ14160.1| 573|Anopheles gambiae putative esterase ... 26 1.4
AY705403-1|AAU12512.1| 520|Anopheles gambiae nicotinic acetylch... 26 1.4
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein. 23 7.2
AJ439060-15|CAD27766.1| 56|Anopheles gambiae putative ribosoma... 23 7.2
AF042732-2|AAC18057.1| 179|Anopheles gambiae TU37B2 protein. 23 7.2
>AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 84.6 bits (200), Expect = 3e-18
Identities = 41/89 (46%), Positives = 49/89 (55%)
Frame = +3
Query: 447 HYTEGADLLETVLDVVRKEAEGCDCLQGFQLVHXXXXXXXXXXXXXXXANLTEEYPDRIT 626
HYTEGA+L++ VLDVVRKE E CDCLQGFQL H + + EEYPDRI
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 627 AXXXXXXXXXXXXXXXXXYNATLSVNQLI 713
YNATLS++QL+
Sbjct: 61 NTYSVVPSPKVSDTVVEPYNATLSIHQLV 89
>AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 84.6 bits (200), Expect = 3e-18
Identities = 41/89 (46%), Positives = 49/89 (55%)
Frame = +3
Query: 447 HYTEGADLLETVLDVVRKEAEGCDCLQGFQLVHXXXXXXXXXXXXXXXANLTEEYPDRIT 626
HYTEGA+L++ VLDVVRKE E CDCLQGFQL H + + EEYPDRI
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 627 AXXXXXXXXXXXXXXXXXYNATLSVNQLI 713
YNATLS++QL+
Sbjct: 61 NTYSVVPSPKVSDTVVEPYNATLSIHQLV 89
>AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 84.6 bits (200), Expect = 3e-18
Identities = 41/89 (46%), Positives = 49/89 (55%)
Frame = +3
Query: 447 HYTEGADLLETVLDVVRKEAEGCDCLQGFQLVHXXXXXXXXXXXXXXXANLTEEYPDRIT 626
HYTEGA+L++ VLDVVRKE E CDCLQGFQL H + + EEYPDRI
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 627 AXXXXXXXXXXXXXXXXXYNATLSVNQLI 713
YNATLS++QL+
Sbjct: 61 NTYSVVPSPKVSDTVVEPYNATLSIHQLV 89
>AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 84.6 bits (200), Expect = 3e-18
Identities = 41/89 (46%), Positives = 49/89 (55%)
Frame = +3
Query: 447 HYTEGADLLETVLDVVRKEAEGCDCLQGFQLVHXXXXXXXXXXXXXXXANLTEEYPDRIT 626
HYTEGA+L++ VLDVVRKE E CDCLQGFQL H + + EEYPDRI
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 627 AXXXXXXXXXXXXXXXXXYNATLSVNQLI 713
YNATLS++QL+
Sbjct: 61 NTYSVVPSPKVSDTVVEPYNATLSIHQLV 89
>U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles
gambiae putativetubulin alpha chain mRNA, complete cds.
).
Length = 91
Score = 28.3 bits (60), Expect = 0.25
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +3
Query: 135 MREIVHVQVGRCGNQIGSKFWE 200
MRE + V VG+ G QIG+ W+
Sbjct: 1 MRECISVHVGQAGVQIGNPCWD 22
>CR954257-9|CAJ14160.1| 573|Anopheles gambiae putative esterase
protein.
Length = 573
Score = 25.8 bits (54), Expect = 1.4
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -2
Query: 236 ATGVDSVLVRYHFPKLRANLVPTSPDLYVNYFSHSRVLITKNLSK 102
A D + +H P A LVP SPD + N S V + N +K
Sbjct: 468 AIHTDELPYLFHIPA--AMLVPVSPDSHANTVSSRVVRMWTNFAK 510
>AY705403-1|AAU12512.1| 520|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 8 protein.
Length = 520
Score = 25.8 bits (54), Expect = 1.4
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -2
Query: 533 EALQAIAAFRFLSDHIEDCFK 471
E L AI A RF++ HI+D K
Sbjct: 426 EVLSAIQAVRFIAQHIKDADK 446
>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
Length = 2259
Score = 23.4 bits (48), Expect = 7.2
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 98 LFSINSLLLIHENERNSSRTGREMWE 175
L+ IN+LLL E R +R R WE
Sbjct: 1154 LYRINALLLADEIRRQVARDLRLGWE 1179
>AJ439060-15|CAD27766.1| 56|Anopheles gambiae putative ribosomal
protein protein.
Length = 56
Score = 23.4 bits (48), Expect = 7.2
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +3
Query: 183 GSKFWEVISDEHGI 224
GS+FW S+ HG+
Sbjct: 17 GSRFWRACSNNHGM 30
>AF042732-2|AAC18057.1| 179|Anopheles gambiae TU37B2 protein.
Length = 179
Score = 23.4 bits (48), Expect = 7.2
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +2
Query: 515 RLLARLPISPFSW 553
R++ARLP P SW
Sbjct: 105 RIVARLPFVPISW 117
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 655,200
Number of Sequences: 2352
Number of extensions: 11497
Number of successful extensions: 32
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 73177125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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