Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte25f07
(687 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0965 - 22996575-22999112,22999202-22999636,22999717-229998... 33 0.16
07_01_0789 - 6150257-6151046,6151167-6151390,6151816-6151991,615... 32 0.49
04_01_0441 - 5750765-5750822,5750936-5751026,5751112-5751313,575... 31 0.86
02_05_0932 - 32841331-32842242 31 1.1
03_04_0029 - 16610182-16611753 30 1.5
04_03_0925 - 20856628-20856690,20856786-20856845,20856924-208570... 30 2.0
02_05_0583 + 30128795-30129158,30129342-30129505,30129602-301296... 30 2.0
06_03_1288 + 29014144-29014376,29015192-29015771,29015929-290163... 29 2.6
06_03_1167 + 28111923-28113218 29 4.6
03_05_0866 - 28370034-28371352,28371447-28371995,28372507-28373512 29 4.6
10_07_0061 + 12489552-12489674,12490761-12490836,12490916-124909... 28 6.0
08_01_0388 + 3432177-3433154 28 6.0
05_01_0099 + 663044-665029 28 6.0
02_01_0606 + 4543031-4543177,4543287-4543709,4543836-4543952,454... 28 6.0
03_06_0277 + 32814621-32814996,32815419-32815558,32816074-32816160 28 8.0
01_05_0086 - 18009957-18010107,18010428-18010557,18010700-180108... 28 8.0
01_05_0012 + 17147764-17148141,17148316-17148465,17149360-171497... 28 8.0
>07_03_0965 -
22996575-22999112,22999202-22999636,22999717-22999801,
22999888-22999957,23000050-23000293,23000396-23000482,
23000655-23000706,23000830-23001226,23001324-23001648,
23001748-23001914,23002007-23002547
Length = 1646
Score = 33.5 bits (73), Expect = 0.16
Identities = 23/102 (22%), Positives = 44/102 (43%), Gaps = 3/102 (2%)
Frame = +2
Query: 281 RQSPSNGVSTASSQQPTP-VPHQPGKVRQMFEERRTKAGIDKSYPL--QPIHNTERTNRK 451
R SP++ STA Q P P + P +++ E G+ + +P +P+ + + +
Sbjct: 255 RPSPASAPSTAPPQPPPPKISKSPSFIQEEIEVAEVLFGLTRQFPCPSKPVESNHKLEVR 314
Query: 452 TLPNGYAKVSNSTTSTRVIVEKRSQKTHTTVSSHSVKKQQKI 577
P AK NS+ + V + S T + K+ + +
Sbjct: 315 DAPE--AKSGNSSPAPSSSVARPSDSTSVATIAPKRKRPRLV 354
>07_01_0789 -
6150257-6151046,6151167-6151390,6151816-6151991,
6152778-6153801
Length = 737
Score = 31.9 bits (69), Expect = 0.49
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = +2
Query: 233 IASLYEAQQARALDRVRQSPSNGVSTASSQQPTPVP--HQP-GKVRQMFEERRTKA 391
I+SL+++ LD PS+ S + P P P HQP R++ E +R A
Sbjct: 208 ISSLFDSMPPPTLDTAAAEPSSSASAERREPPPPAPDEHQPSAAAREVAEGKRPAA 263
>04_01_0441 -
5750765-5750822,5750936-5751026,5751112-5751313,
5751392-5752033,5752175-5752409,5752500-5752619,
5752864-5753282
Length = 588
Score = 31.1 bits (67), Expect = 0.86
Identities = 17/76 (22%), Positives = 32/76 (42%)
Frame = +2
Query: 302 VSTASSQQPTPVPHQPGKVRQMFEERRTKAGIDKSYPLQPIHNTERTNRKTLPNGYAKVS 481
+S+A+ +QP + H P ++MF +R A + P+ E + L S
Sbjct: 295 LSSATDRQPVAMSHMPNSFKRMFSQRSAAAAAATTSTTSPLSKVEPSITSPLSRKSLLGS 354
Query: 482 NSTTSTRVIVEKRSQK 529
+ S ++ E Q+
Sbjct: 355 PVSGSVSLVRESEGQE 370
>02_05_0932 - 32841331-32842242
Length = 303
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/60 (30%), Positives = 24/60 (40%)
Frame = +2
Query: 275 RVRQSPSNGVSTASSQQPTPVPHQPGKVRQMFEERRTKAGIDKSYPLQPIHNTERTNRKT 454
RVR P + Q P P+P G V + RR KS P + N NR++
Sbjct: 84 RVRPDPQPSLLLPPPQPPPPMPESTGDVAEKKRGRRKNKNGAKSAPFACLLNALLCNRRS 143
>03_04_0029 - 16610182-16611753
Length = 523
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = -2
Query: 449 SGSFFRCCVSAVAGXXXXXXXXXXXLRTFDE-PFLADEVQASAAAMRLY*RHCWEIASPG 273
+G+ A AG F+E PF A+ V+++ + +R Y WE+++P
Sbjct: 440 AGAILAAADVAAAGEGREGWRERMAAAGFEEAPFGAEAVESARSLLRKY-DSGWEMSAPS 498
Query: 272 PRHAPVVLR 246
P A V LR
Sbjct: 499 PAAAAVALR 507
>04_03_0925 - 20856628-20856690,20856786-20856845,20856924-20857001,
20857127-20857192,20857542-20858675,20858991-20860283
Length = 897
Score = 29.9 bits (64), Expect = 2.0
Identities = 36/156 (23%), Positives = 59/156 (37%)
Frame = +2
Query: 152 MEKGGGSRLLQMQARFQQKQLQERELKIASLYEAQQARALDRVRQSPSNGVSTASSQQPT 331
M+K G+ + + + Q+ ++Q R L + Q+ + + G + + Q
Sbjct: 752 MDKSSGTTAKESKKKGQKNKIQSRNCIEKGLRKKQKVHSEQPSEYALLGGSQSGNMFQAF 811
Query: 332 PVPHQPGKVRQMFEERRTKAGIDKSYPLQPIHNTERTNRKTLPNGYAKVSNSTTSTRVIV 511
P + +T GID S P+ PI E +P+G TT
Sbjct: 812 EGPPNMSPLGTQTPTYKTYRGIDLSSPMGPISYDE------MPSGLDPTF--TTHLGFAT 863
Query: 512 EKRSQKTHTTVSSHSVKKQQKIDNLVNGSGDLNHNH 619
SQ VSS S QQ +N + +LN+ H
Sbjct: 864 YHTSQ-----VSSSSPHNQQPDENFCTKTSELNNLH 894
>02_05_0583 +
30128795-30129158,30129342-30129505,30129602-30129665,
30130082-30130215,30130369-30130452,30130580-30130654,
30130734-30130805,30130892-30130965,30131217-30131269,
30131388-30131497,30131824-30131892,30131975-30132049,
30132449-30132508,30132555-30132647,30132718-30132797,
30132877-30132976,30133153-30133590
Length = 702
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Frame = +2
Query: 473 KVSNSTTSTRVIVEKRSQKTHTTVSSHSVKKQQKIDNLVNGSGDL--NHNHEDDISAVKH 646
K +N TS V K ++TH T+ +H K++ GD HN E+ S K
Sbjct: 603 KTTNEETSILDGVTKDKRQTHETLKNHKKGKKRNGPESTKIKGDQKETHNEEEPTSEKKQ 662
Query: 647 SLPQKQRRN 673
+ K +++
Sbjct: 663 PVSAKIKKS 671
>06_03_1288 +
29014144-29014376,29015192-29015771,29015929-29016320,
29016636-29016663,29017207-29017417,29017551-29017819
Length = 570
Score = 29.5 bits (63), Expect = 2.6
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 3/100 (3%)
Frame = +2
Query: 263 RALDRVRQSPSNGVSTASSQQPT---PVPHQPGKVRQMFEERRTKAGIDKSYPLQPIHNT 433
R + Q+PSN +++PT P+ G V F + T + L P H+
Sbjct: 89 RPFNSPSQTPSNSQVFQPNRRPTELAPLLVAAG-VCFGFADPTTNIIANTLSSLPPDHSA 147
Query: 434 ERTNRKTLPNGYAKVSNSTTSTRVIVEKRSQKTHTTVSSH 553
++ RKT A + S++ TR I E+ + T ++S+
Sbjct: 148 KKRKRKTKAAPSAAAARSSSETRAIAERSLEGLVTFLTSY 187
>06_03_1167 + 28111923-28113218
Length = 431
Score = 28.7 bits (61), Expect = 4.6
Identities = 24/114 (21%), Positives = 46/114 (40%)
Frame = +2
Query: 281 RQSPSNGVSTASSQQPTPVPHQPGKVRQMFEERRTKAGIDKSYPLQPIHNTERTNRKTLP 460
RQ+ + TA+S+ P + + + T+ G L+P + +
Sbjct: 240 RQTLDSRQGTAASRAKARSPSPRPRRQSNGKATDTRGGNKVVDELKPKGASSSQSGSAAA 299
Query: 461 NGYAKVSNSTTSTRVIVEKRSQKTHTTVSSHSVKKQQKIDNLVNGSGDLNHNHE 622
AK ++ RVI + S ++ S +++++ +L SGD N N E
Sbjct: 300 AATAKRMAGSSKMRVIPSRYSLTPGASLGSSGAQERRRKQSLPGSSGDANQNEE 353
>03_05_0866 - 28370034-28371352,28371447-28371995,28372507-28373512
Length = 957
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
Frame = +2
Query: 194 RFQQKQLQERELKI----ASLYEAQQARALDRVRQSPSNGVSTASS 319
R ++KQ EREL++ L+E ++ R + R + NG S+ASS
Sbjct: 675 REKEKQDLERELELYRRKVHLFEVKERRKMSRHKADDHNGSSSASS 720
>10_07_0061 + 12489552-12489674,12490761-12490836,12490916-12490980,
12491089-12491166,12492156-12492236,12492813-12492974,
12493328-12493426,12493509-12494797,12495063-12495286,
12495373-12495500,12495596-12495634,12495724-12497178
Length = 1272
Score = 28.3 bits (60), Expect = 6.0
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +2
Query: 179 LQMQARFQQKQLQERELKIASLYEAQQARALDRVRQSPSNGVSTASSQQPTPVPHQP-GK 355
+Q+Q +FQQ LQ+++L+ L + QQ + +++Q QQ Q G
Sbjct: 1120 MQLQQQFQQNPLQQQQLQ--QLQQQQQQQQQQQIQQQQQQQQQQQQQQQQIQQQQQQMGS 1177
Query: 356 VRQMFEERRTKAGIDKS 406
Q + + AG +S
Sbjct: 1178 PLQQAAQVGSPAGSQQS 1194
>08_01_0388 + 3432177-3433154
Length = 325
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +2
Query: 257 QARALDRVRQSPSNGVSTASSQQPT-PVPH 343
+AR + + SNG +TASS QPT +PH
Sbjct: 13 RARVIHSRSNANSNGATTASSSQPTRSLPH 42
>05_01_0099 + 663044-665029
Length = 661
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -1
Query: 321 CDEAVLTPLLGDCLTRSK 268
CDEA+L LLG C+T ++
Sbjct: 540 CDEAILGTLLGSCMTHNE 557
>02_01_0606 +
4543031-4543177,4543287-4543709,4543836-4543952,
4544064-4544423
Length = 348
Score = 28.3 bits (60), Expect = 6.0
Identities = 21/74 (28%), Positives = 33/74 (44%)
Frame = +2
Query: 200 QQKQLQERELKIASLYEAQQARALDRVRQSPSNGVSTASSQQPTPVPHQPGKVRQMFEER 379
+ +QL E +A+ YEA Q++ D V S +NG ++ T + G V +
Sbjct: 63 ENRQLSEMLAAVAAKYEALQSQFSDMVTASANNGGGGGNNPSST---SEGGSVSP--SRK 117
Query: 380 RTKAGIDKSYPLQP 421
R +D S P P
Sbjct: 118 RKSESLDDSPPPPP 131
>03_06_0277 + 32814621-32814996,32815419-32815558,32816074-32816160
Length = 200
Score = 27.9 bits (59), Expect = 8.0
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = -1
Query: 339 GTGVGCCDEAV-LTPLLGDCL--TRSKARACCAS*SDAIFNSLSCSC 208
G G GC E V L+P +G + A ACC++ S + +S C C
Sbjct: 42 GGGSGCMPELVSLSPCMGYMSGNATAPAAACCSALSGVLRSSPRCLC 88
>01_05_0086 -
18009957-18010107,18010428-18010557,18010700-18010877,
18011032-18011141,18011217-18011332,18011449-18011710,
18012345-18012660,18012685-18012927
Length = 501
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 290 PSNGVSTASSQQPTPVPHQPGKVRQMFEERRTKAG 394
P +G + S+Q +P PH+P R+ RR + G
Sbjct: 13 PPSGGNLHGSRQSSPPPHRPDPRRRRRRRRRRRRG 47
>01_05_0012 +
17147764-17148141,17148316-17148465,17149360-17149729,
17149898-17150015,17150121-17150226,17150326-17150418,
17150498-17150593,17151169-17151891,17152012-17152160,
17153434-17153520,17153541-17153625
Length = 784
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +2
Query: 437 RTNRKTLPNGYAKVSNSTTSTRVIVEKRSQKTHTTVSSHSVKK 565
R+ R+T G +K+SNST+ ++Q H SSHS+ K
Sbjct: 446 RSRRRTEERGKSKMSNSTSGF-----SQNQGQHRPASSHSLAK 483
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,667,267
Number of Sequences: 37544
Number of extensions: 315533
Number of successful extensions: 1161
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1160
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1744894544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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