Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25e22
         (176 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF038623-2|AAB94158.1|  342|Caenorhabditis elegans Seven tm rece...    27   1.8  
U41263-6|AAC24432.1|  338|Caenorhabditis elegans Serpentine rece...    25   7.1  
AL023845-5|CAA19537.1|  111|Caenorhabditis elegans Hypothetical ...    25   7.1  
Z81481-1|CAB03947.1|  404|Caenorhabditis elegans Hypothetical pr...    25   9.4  
AL117206-6|CAB60450.1|  734|Caenorhabditis elegans Hypothetical ...    25   9.4  
AL032627-22|CAD56607.2|   89|Caenorhabditis elegans Hypothetical...    25   9.4  
AF016445-2|AAC69064.1|  376|Caenorhabditis elegans Serpentine re...    25   9.4  

>AF038623-2|AAB94158.1|  342|Caenorhabditis elegans Seven tm
           receptor protein 166 protein.
          Length = 342

 Score = 27.1 bits (57), Expect = 1.8
 Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
 Frame = -2

Query: 100 CVVVFNLLVLYNIIT--PSGSGQYDA 29
           C +VFN L++Y IIT  P   G Y A
Sbjct: 18  CAIVFNSLLIYLIITKSPKKMGNYKA 43


>U41263-6|AAC24432.1|  338|Caenorhabditis elegans Serpentine
           receptor, class a (alpha)protein 26 protein.
          Length = 338

 Score = 25.0 bits (52), Expect = 7.1
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -2

Query: 130 INKLITFLCSCVVVFNLLVLY 68
           +NK+ T + SC +V  L +LY
Sbjct: 195 VNKVRTLVMSCCIVVTLTILY 215


>AL023845-5|CAA19537.1|  111|Caenorhabditis elegans Hypothetical
           protein Y51B9A.7 protein.
          Length = 111

 Score = 25.0 bits (52), Expect = 7.1
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -2

Query: 127 NKLITFLCSCVVVFNLLVLY 68
           N L+  LC  V+V +++VLY
Sbjct: 58  NVLVVILCIIVIVLSIIVLY 77


>Z81481-1|CAB03947.1|  404|Caenorhabditis elegans Hypothetical
           protein C38D9.1 protein.
          Length = 404

 Score = 24.6 bits (51), Expect = 9.4
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = +3

Query: 33  SYCPLPLGVIIL*STSRLKTTTQEHRKV 116
           +YCP+P G  I+    +++    ++RK+
Sbjct: 176 NYCPVPNGCTIIYENRKIQIKGTDYRKI 203


>AL117206-6|CAB60450.1|  734|Caenorhabditis elegans Hypothetical
           protein Y67A10A.9 protein.
          Length = 734

 Score = 24.6 bits (51), Expect = 9.4
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = -2

Query: 115 TFLCSCVVVFNLLVLYNIITPSGSGQY 35
           TF+C+C V+  +  L +++   GSG +
Sbjct: 163 TFICACTVIITIATLLSLL---GSGAF 186


>AL032627-22|CAD56607.2|   89|Caenorhabditis elegans Hypothetical
           protein Y41C4A.17 protein.
          Length = 89

 Score = 24.6 bits (51), Expect = 9.4
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -2

Query: 145 FPNQFINKLITFLCSCVVVFNLLVLY 68
           FP    ++L  +LC     F +LVLY
Sbjct: 29  FPQNLQSRLFDYLCCGQFFFRILVLY 54


>AF016445-2|AAC69064.1|  376|Caenorhabditis elegans Serpentine
           receptor, class w protein134 protein.
          Length = 376

 Score = 24.6 bits (51), Expect = 9.4
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -2

Query: 163 VQVLI*FPNQFINKLITFLCSCVVVFNLLVLYNIITP 53
           V +L+   NQ+  +  T+L   V V   LVL N + P
Sbjct: 113 VDLLLYLVNQYARRCSTWLLFSVAVIRTLVLRNPMNP 149


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,916,358
Number of Sequences: 27780
Number of extensions: 54920
Number of successful extensions: 112
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 112
length of database: 12,740,198
effective HSP length: 39
effective length of database: 11,656,778
effective search space used: 221478782
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)