Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25e19
         (767 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006679-7|AAK84463.1|  531|Caenorhabditis elegans Lipid deplete...   174   5e-44
Z92830-12|CAE17777.1|  191|Caenorhabditis elegans Hypothetical p...    34   0.13 
Z77663-4|CAB01213.1|  605|Caenorhabditis elegans Hypothetical pr...    29   2.8  
U23511-5|AAC46794.1|  578|Caenorhabditis elegans Hypothetical pr...    29   4.8  
Z81043-5|CAB02802.2|  278|Caenorhabditis elegans Hypothetical pr...    28   6.4  

>AC006679-7|AAK84463.1|  531|Caenorhabditis elegans Lipid depleted
           protein 7 protein.
          Length = 531

 Score =  174 bits (424), Expect = 5e-44
 Identities = 80/197 (40%), Positives = 115/197 (58%)
 Frame = +1

Query: 163 YSSGEGAQFMTRXXXXXXXXXXXXDFRRICILKGIYPREPRNRKRAQKGAGGIKTLYHTK 342
           Y++G    +M+R            DFRR+CI+KGIYP EP ++K+A KG+   K  Y+ K
Sbjct: 9   YTAGAAVAYMSRKQALKKLQLTLKDFRRLCIIKGIYPHEPAHKKQANKGSTANKVFYYRK 68

Query: 343 DIKFLLHEPIIWKLRELKVYQQKIRRARAQREYGKMRKFLRDYPEINIDHIVKERYPTFV 522
           DI FL HEPII K R+ KV+ +K+   +A++E  K++K   + P  ++D IVKER+PTF 
Sbjct: 69  DINFLAHEPIINKFRDYKVFLRKLNHLKAKKEEDKLKKLYENKPVYSLDTIVKERFPTFG 128

Query: 523 XXXXXXXXXXXXXXXXSTFPSLKKVPRDQSFLCRRLTVEFMHAVIAAKALRKVFVSVKGF 702
                           +  P  + +       CR+LT EFMH VI +++LR  F+S+KG 
Sbjct: 129 SALRDMDDALSLCFTFAMLPHTRVLKEGMIDSCRKLTAEFMHYVIESQSLRNTFISIKGI 188

Query: 703 YYQVEFEGQTITWIVPH 753
           YYQ E  G+ ITW+VPH
Sbjct: 189 YYQAEVHGEKITWVVPH 205


>Z92830-12|CAE17777.1|  191|Caenorhabditis elegans Hypothetical
           protein F11A5.15 protein.
          Length = 191

 Score = 33.9 bits (74), Expect = 0.13
 Identities = 14/41 (34%), Positives = 26/41 (63%)
 Frame = -3

Query: 525 VNKRGVSFLYYVINVYFWIVPQKLSHLAIFSLCSCTTNFLL 403
           ++KR   ++  + N++F+I+P  L  + I+ L SC +N LL
Sbjct: 7   ISKRKSIYILIISNIFFFIIPLYLIVIGIWKLTSCPSNQLL 47


>Z77663-4|CAB01213.1|  605|Caenorhabditis elegans Hypothetical
           protein F53F4.4 protein.
          Length = 605

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
 Frame = +3

Query: 117 LNKDNNHN--GVQKEEEVFFRRRSSVYDQKSSA*ETTTILERFQTYLYFERNIPPRT*KP 290
           LN D+ +   GV KEEEV     S+   +  S   T+ +LE   T  + E  I  ++ + 
Sbjct: 177 LNVDDKNTTLGVSKEEEVIATTESTKEKKLKSGEVTSHVLESTTTVEFLENKISEKSNEI 236

Query: 291 KEGS 302
            EGS
Sbjct: 237 VEGS 240


>U23511-5|AAC46794.1|  578|Caenorhabditis elegans Hypothetical
           protein C32D5.6 protein.
          Length = 578

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = +1

Query: 304 KGAGGIKTLYHT-KDIKFLLHEPIIWKLRELKVYQQ 408
           KGA  I+T Y T +  + L++EP +W  R  KV +Q
Sbjct: 164 KGALNIRTCYQTYRYCEKLMNEPSVWVGRNKKVQEQ 199


>Z81043-5|CAB02802.2|  278|Caenorhabditis elegans Hypothetical
           protein C29F3.6 protein.
          Length = 278

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
 Frame = -1

Query: 245 RLKSFKDSCSFLSAAFLVIN*APSPEEYFFF-FLDTIVIVILVQKVICKGFLFGCIKY*M 69
           +L +FK+S  +LSA     +   S    F+F F+D + + +  + V   GFL   + + +
Sbjct: 35  KLSAFKNSFGYLSANQAFADALYSSLYLFYFCFMDFLDVFLFQENVFIFGFLV-AVFHDV 93

Query: 68  CVYYYFTSSHILERLMEIW 12
            V  +F  S  L R + +W
Sbjct: 94  SVLTHFIIS--LNRFISVW 110


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,363,345
Number of Sequences: 27780
Number of extensions: 401005
Number of successful extensions: 884
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 883
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)