Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25e14
         (615 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69664-8|CAN86924.1| 1287|Caenorhabditis elegans Hypothetical pr...    33   0.16 
Z69664-7|CAA93515.2| 1338|Caenorhabditis elegans Hypothetical pr...    33   0.16 
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr...    29   2.0  
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr...    29   2.0  
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr...    29   2.0  
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr...    29   2.0  
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p...    29   2.0  
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p...    29   2.0  
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p...    29   2.0  
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr...    29   2.0  
U58732-7|AAB00597.1|  345|Caenorhabditis elegans Taf (tbp-associ...    29   2.0  
U41746-9|AAA83334.3|  559|Caenorhabditis elegans Groundhog (hedg...    29   2.6  
AL033509-1|CAA22059.1| 1494|Caenorhabditis elegans Hypothetical ...    28   6.1  
Z75539-2|CAA99844.2|  555|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z22181-9|CAA80186.1|  453|Caenorhabditis elegans Hypothetical pr...    27   8.1  
U40800-5|AAO91743.1|  936|Caenorhabditis elegans Hypothetical pr...    27   8.1  
U32326-1|AAC46965.1|  555|Caenorhabditis elegans G protein signa...    27   8.1  
AF003740-1|AAM15561.2|  488|Caenorhabditis elegans Hypothetical ...    27   8.1  

>Z69664-8|CAN86924.1| 1287|Caenorhabditis elegans Hypothetical
           protein K04D7.5b protein.
          Length = 1287

 Score = 33.1 bits (72), Expect = 0.16
 Identities = 20/58 (34%), Positives = 26/58 (44%)
 Frame = +2

Query: 374 LRDRKNGKIGGTSMPVQTPSMYGATTNDIYSDAGPGSSLDLDTNRPVFSEDTYRPDNE 547
           +R RK     G S  V TP  +GA       D GP S LDL+       +D Y  +N+
Sbjct: 96  MRSRKKPDDSGASSTVNTPKKFGALR---IEDRGPKSFLDLEYEEDDEYDDDYIEEND 150


>Z69664-7|CAA93515.2| 1338|Caenorhabditis elegans Hypothetical
           protein K04D7.5a protein.
          Length = 1338

 Score = 33.1 bits (72), Expect = 0.16
 Identities = 20/58 (34%), Positives = 26/58 (44%)
 Frame = +2

Query: 374 LRDRKNGKIGGTSMPVQTPSMYGATTNDIYSDAGPGSSLDLDTNRPVFSEDTYRPDNE 547
           +R RK     G S  V TP  +GA       D GP S LDL+       +D Y  +N+
Sbjct: 96  MRSRKKPDDSGASSTVNTPKKFGALR---IEDRGPKSFLDLEYEEDDEYDDDYIEEND 150


>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical
           protein F07A11.6e protein.
          Length = 2101

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -2

Query: 347 MPSASQHMPAGMTTSPRSSQPLLPMSPL 264
           +P  SQ   +G  T+PRSSQP   MSP+
Sbjct: 503 LPGTSQPSTSGGITTPRSSQPPPLMSPV 530


>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical
           protein F07A11.6c protein.
          Length = 2392

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -2

Query: 347 MPSASQHMPAGMTTSPRSSQPLLPMSPL 264
           +P  SQ   +G  T+PRSSQP   MSP+
Sbjct: 794 LPGTSQPSTSGGITTPRSSQPPPLMSPV 821


>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical
           protein F07A11.6b protein.
          Length = 2407

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -2

Query: 347 MPSASQHMPAGMTTSPRSSQPLLPMSPL 264
           +P  SQ   +G  T+PRSSQP   MSP+
Sbjct: 809 LPGTSQPSTSGGITTPRSSQPPPLMSPV 836


>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical
           protein F07A11.6a protein.
          Length = 2211

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -2

Query: 347 MPSASQHMPAGMTTSPRSSQPLLPMSPL 264
           +P  SQ   +G  T+PRSSQP   MSP+
Sbjct: 809 LPGTSQPSTSGGITTPRSSQPPPLMSPV 836


>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
           protein F07A11.6e protein.
          Length = 2101

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -2

Query: 347 MPSASQHMPAGMTTSPRSSQPLLPMSPL 264
           +P  SQ   +G  T+PRSSQP   MSP+
Sbjct: 503 LPGTSQPSTSGGITTPRSSQPPPLMSPV 530


>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
           protein F07A11.6c protein.
          Length = 2392

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -2

Query: 347 MPSASQHMPAGMTTSPRSSQPLLPMSPL 264
           +P  SQ   +G  T+PRSSQP   MSP+
Sbjct: 794 LPGTSQPSTSGGITTPRSSQPPPLMSPV 821


>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
           protein F07A11.6b protein.
          Length = 2407

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -2

Query: 347 MPSASQHMPAGMTTSPRSSQPLLPMSPL 264
           +P  SQ   +G  T+PRSSQP   MSP+
Sbjct: 809 LPGTSQPSTSGGITTPRSSQPPPLMSPV 836


>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical
           protein F07A11.6a protein.
          Length = 2211

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -2

Query: 347 MPSASQHMPAGMTTSPRSSQPLLPMSPL 264
           +P  SQ   +G  T+PRSSQP   MSP+
Sbjct: 809 LPGTSQPSTSGGITTPRSSQPPPLMSPV 836


>U58732-7|AAB00597.1|  345|Caenorhabditis elegans Taf
           (tbp-associated transcriptionfactor) family protein 11.1
           protein.
          Length = 345

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +2

Query: 530 YRPDNEGPGPNLEEPIPARPSVSYDD 607
           ++P+ E PGP+   P PARP+   DD
Sbjct: 202 HQPEEEAPGPS--RPAPARPARKLDD 225


>U41746-9|AAA83334.3|  559|Caenorhabditis elegans Groundhog
           (hedgehog-like family)protein 6 protein.
          Length = 559

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +2

Query: 533 RPDNEGPGPNLEEPIPARPS 592
           RP+   P P +E P+PARP+
Sbjct: 200 RPEPARPAPYIERPVPARPA 219


>AL033509-1|CAA22059.1| 1494|Caenorhabditis elegans Hypothetical
           protein Y113G7C.1 protein.
          Length = 1494

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = -2

Query: 83  FGWEDMRRWCETPXNXHNLPXSHLYF 6
           F WED RR  E+     NLP S  YF
Sbjct: 258 FEWEDYRRKSESFGEVENLPGSTEYF 283


>Z75539-2|CAA99844.2|  555|Caenorhabditis elegans Hypothetical
           protein F28C1.2 protein.
          Length = 555

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 19/79 (24%), Positives = 32/79 (40%)
 Frame = +2

Query: 299 LGKLSYQQACAEKLMALPGSYIGQILRDRKNGKIGGTSMPVQTPSMYGATTNDIYSDAGP 478
           +G   Y Q+ A    +LP +  G     RKN +   TS   ++PS   A      + A  
Sbjct: 240 IGCTQYSQSVAAAHASLPSTSNGSATSPRKNDQEPSTSSGGESPSTSSAAAGTATTSAPS 299

Query: 479 GSSLDLDTNRPVFSEDTYR 535
            S+  + T     +  ++R
Sbjct: 300 TSTPPVTTITATINAGSFR 318


>Z22181-9|CAA80186.1|  453|Caenorhabditis elegans Hypothetical
           protein ZK632.11 protein.
          Length = 453

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 8/17 (47%), Positives = 14/17 (82%)
 Frame = -2

Query: 605 HRMKRTGVLEWVPPGWV 555
           +RM+R G+++  PPGW+
Sbjct: 186 YRMRRLGLIDGYPPGWL 202


>U40800-5|AAO91743.1|  936|Caenorhabditis elegans Hypothetical
           protein D2096.3 protein.
          Length = 936

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 13/29 (44%), Positives = 14/29 (48%)
 Frame = +2

Query: 182 FSALFASLTYAAVKYGHLKPNPRFGPFPK 268
           F     SL Y A +YGH    P F  FPK
Sbjct: 680 FLPFLYSLHYNAARYGHTVIRPLFFEFPK 708


>U32326-1|AAC46965.1|  555|Caenorhabditis elegans G protein
           signaling regulator protein.
          Length = 555

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 19/79 (24%), Positives = 32/79 (40%)
 Frame = +2

Query: 299 LGKLSYQQACAEKLMALPGSYIGQILRDRKNGKIGGTSMPVQTPSMYGATTNDIYSDAGP 478
           +G   Y Q+ A    +LP +  G     RKN +   TS   ++PS   A      + A  
Sbjct: 240 IGCTQYSQSVAAAHASLPSTSNGSATSPRKNDQEPSTSSGGESPSTSSAAAGTATTSAPS 299

Query: 479 GSSLDLDTNRPVFSEDTYR 535
            S+  + T     +  ++R
Sbjct: 300 TSTPPVTTITATINAGSFR 318


>AF003740-1|AAM15561.2|  488|Caenorhabditis elegans Hypothetical
           protein C41D11.3 protein.
          Length = 488

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 16/51 (31%), Positives = 23/51 (45%)
 Frame = -2

Query: 416 ALKSLQSFHSSDLLVSALYSCRAMPSASQHMPAGMTTSPRSSQPLLPMSPL 264
           ++K+++    S L  S   S +  P   Q  P G  T    S P LP +PL
Sbjct: 27  SMKTIKRGQGSSLARSL--SLKLSPKTDQQKPIGADTEKSCSTPSLPTAPL 75


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,680,425
Number of Sequences: 27780
Number of extensions: 322890
Number of successful extensions: 981
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 977
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)